Literature DB >> 25218144

Systems-based technologies in profiling the stem cell molecular framework for cardioregenerative medicine.

Saranya P Wyles1, Randolph S Faustino, Xing Li, Andre Terzic, Timothy J Nelson.   

Abstract

Over the last decade, advancements in stem cell biology have yielded a variety of sources for stem cell-based cardiovascular investigation. Stem cell behavior, whether to maintain its stable state of pluripotency or to prime toward the cardiovascular lineage is governed by a set of coordinated interactions between epigenetic, transcriptional, and translational mechanisms. The science of incorporating genes (genomics), RNA (transcriptomics), proteins (proteomics), and metabolites (metabolomics) data in a specific biological sample is known as systems biology. Integrating systems biology in progression with stem cell biologics can contribute to our knowledge of mechanisms that underlie pluripotency maintenance and guarantee fidelity of cardiac lineage specification. This review provides a brief summarization of OMICS-based strategies including transcriptomics, proteomics, and metabolomics used to understand stem cell fate and to outline molecular processes involved in heart development. Additionally, current efforts in cardioregeneration based on the "one-size-fits-all" principle limit the potential of individualized therapy in regenerative medicine. Here, we summarize recent studies that introduced systems biology into cardiovascular clinical outcomes analysis, allowing for predictive assessment for disease recurrence and patient-specific therapeutic response.

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Year:  2015        PMID: 25218144      PMCID: PMC4362919          DOI: 10.1007/s12015-014-9557-5

Source DB:  PubMed          Journal:  Stem Cell Rev Rep        ISSN: 2629-3277            Impact factor:   5.739


  105 in total

Review 1.  Sizing up the heart: development redux in disease.

Authors:  Eric N Olson; Michael D Schneider
Journal:  Genes Dev       Date:  2003-07-31       Impact factor: 11.361

Review 2.  Stem cells: clinical trials results the end of the beginning or the beginning of the end?

Authors:  Atta Behfar; Ruben Crespo-Diaz; Timothy J Nelson; Andre Terzic; Bernard J Gersh
Journal:  Cardiovasc Hematol Disord Drug Targets       Date:  2010-09-01

Review 3.  The model organism as a system: integrating 'omics' data sets.

Authors:  Andrew R Joyce; Bernhard Ø Palsson
Journal:  Nat Rev Mol Cell Biol       Date:  2006-03       Impact factor: 94.444

4.  Endogenous cardiac stem cell activation by insulin-like growth factor-1/hepatocyte growth factor intracoronary injection fosters survival and regeneration of the infarcted pig heart.

Authors:  Georgina M Ellison; Daniele Torella; Santo Dellegrottaglie; Claudia Perez-Martinez; Armando Perez de Prado; Carla Vicinanza; Saranya Purushothaman; Valentina Galuppo; Claudio Iaconetti; Cheryl D Waring; Andrew Smith; Michele Torella; Carlos Cuellas Ramon; Jose Manuel Gonzalo-Orden; Valter Agosti; Ciro Indolfi; Manuel Galiñanes; Felipe Fernandez-Vazquez; Bernardo Nadal-Ginard
Journal:  J Am Coll Cardiol       Date:  2011-06-30       Impact factor: 24.094

5.  A systems biology approach for defining the molecular framework of the hematopoietic stem cell niche.

Authors:  Pierre Charbord; Claire Pouget; Hans Binder; Florent Dumont; Grégoire Stik; Pacifique Levy; Fabrice Allain; Céline Marchal; Jenna Richter; Benjamin Uzan; Françoise Pflumio; Franck Letourneur; Henry Wirth; Elaine Dzierzak; David Traver; Thierry Jaffredo; Charles Durand
Journal:  Cell Stem Cell       Date:  2014-07-17       Impact factor: 24.633

6.  Reprogramming of human somatic cells to pluripotency with defined factors.

Authors:  In-Hyun Park; Rui Zhao; Jason A West; Akiko Yabuuchi; Hongguang Huo; Tan A Ince; Paul H Lerou; M William Lensch; George Q Daley
Journal:  Nature       Date:  2007-12-23       Impact factor: 49.962

7.  Myocardial Notch signaling reprograms cardiomyocytes to a conduction-like phenotype.

Authors:  Stacey Rentschler; Alberta H Yen; Jia Lu; Nataliya B Petrenko; Min Min Lu; Lauren J Manderfield; Vickas V Patel; Glenn I Fishman; Jonathan A Epstein
Journal:  Circulation       Date:  2012-07-26       Impact factor: 29.690

Review 8.  Systems biology of stem cell fate and cellular reprogramming.

Authors:  Ben D Macarthur; Avi Ma'ayan; Ihor R Lemischka
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-09       Impact factor: 94.444

9.  Glycolytic network restructuring integral to the energetics of embryonic stem cell cardiac differentiation.

Authors:  Susan Chung; D Kent Arrell; Randolph S Faustino; Andre Terzic; Petras P Dzeja
Journal:  J Mol Cell Cardiol       Date:  2010-01-04       Impact factor: 5.000

Review 10.  Cardiac cell repair therapy: a clinical perspective.

Authors:  Bernard J Gersh; Robert D Simari; Atta Behfar; Carmen M Terzic; Andre Terzic
Journal:  Mayo Clin Proc       Date:  2009-10       Impact factor: 7.616

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  1 in total

Review 1.  Stem cells: the pursuit of genomic stability.

Authors:  Saranya P Wyles; Emma B Brandt; Timothy J Nelson
Journal:  Int J Mol Sci       Date:  2014-11-14       Impact factor: 5.923

  1 in total

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