Literature DB >> 25213333

Experience and the ever-changing brain: what the transcriptome can reveal.

Todd G Rubin1, Jason D Gray, Bruce S McEwen.   

Abstract

The brain is an ever-changing organ that encodes memories and directs behavior. Neuroanatomical studies have revealed structural plasticity of neural architecture, and advances in gene expression technology and epigenetics have demonstrated new mechanisms underlying the brain's dynamic nature. Stressful experiences challenge the plasticity of the brain, and prolonged exposure to environmental stress redefines the normative transcriptional profile of both neurons and glia, and can lead to the onset of mental illness. A more thorough understanding of normal and abnormal gene expression is needed to define the diseased brain and improve current treatments for psychiatric disorders. The efforts to describe gene expression networks have been bolstered by microarray and RNA-sequencing technologies. The heterogeneity of neural cell populations and their unique microenvironments, coupled with broad ranging interconnectivity, makes resolving this complexity exceedingly challenging and requires the combined efforts of single cell and systems level expression profiling to identify targets for therapeutic intervention.
© 2014 WILEY Periodicals, Inc.

Entities:  

Keywords:  RNA-seq; epigenetics; gene expression; microarray; stress

Mesh:

Substances:

Year:  2014        PMID: 25213333      PMCID: PMC4469199          DOI: 10.1002/bies.201400095

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  110 in total

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3.  Pubertal shifts in adrenal responsiveness to stress and adrenocorticotropic hormone in male rats.

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Journal:  Psychoneuroendocrinology       Date:  2014-01-30       Impact factor: 4.905

4.  DNA binding of the glucocorticoid receptor is not essential for survival.

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5.  Mechanisms of initiation and reversal of drug-seeking behavior induced by prenatal exposure to glucocorticoids.

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Journal:  Mol Psychiatry       Date:  2011-10-04       Impact factor: 15.992

Review 6.  Brain corticosteroid receptor balance in health and disease.

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7.  Stress and glucocorticoids affect the expression of brain-derived neurotrophic factor and neurotrophin-3 mRNAs in the hippocampus.

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Journal:  J Neurosci       Date:  1995-03       Impact factor: 6.167

8.  Acute stress, but not corticosterone, disrupts short- and long-term synaptic plasticity in rat dorsal subiculum via glucocorticoid receptor activation.

Authors:  Matthew J MacDougall; John G Howland
Journal:  Cereb Cortex       Date:  2012-08-23       Impact factor: 5.357

Review 9.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

10.  A paternal environmental legacy: evidence for epigenetic inheritance through the male germ line.

Authors:  Adelheid Soubry; Cathrine Hoyo; Randy L Jirtle; Susan K Murphy
Journal:  Bioessays       Date:  2014-01-16       Impact factor: 4.345

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  15 in total

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Authors:  Nicola Bliim; Iryna Leshchyns'ka; Vladimir Sytnyk; Michael Janitz
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Review 2.  Stress Effects on Neuronal Structure: Hippocampus, Amygdala, and Prefrontal Cortex.

Authors:  Bruce S McEwen; Carla Nasca; Jason D Gray
Journal:  Neuropsychopharmacology       Date:  2015-06-16       Impact factor: 7.853

3.  Sex-specific hippocampal 5-hydroxymethylcytosine is disrupted in response to acute stress.

Authors:  Ligia A Papale; Sisi Li; Andy Madrid; Qi Zhang; Li Chen; Pankaj Chopra; Peng Jin; Sündüz Keleş; Reid S Alisch
Journal:  Neurobiol Dis       Date:  2016-08-26       Impact factor: 5.996

4.  Stress and corticosteroids regulate rat hippocampal mitochondrial DNA gene expression via the glucocorticoid receptor.

Authors:  Richard G Hunter; Ma'ayan Seligsohn; Todd G Rubin; Brian B Griffiths; Yildirim Ozdemir; Donald W Pfaff; Nicole A Datson; Bruce S McEwen
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-25       Impact factor: 11.205

Review 5.  Mechanisms of stress in the brain.

Authors:  Bruce S McEwen; Nicole P Bowles; Jason D Gray; Matthew N Hill; Richard G Hunter; Ilia N Karatsoreos; Carla Nasca
Journal:  Nat Neurosci       Date:  2015-09-25       Impact factor: 24.884

6.  Focus on females: A less biased approach for studying strategies and mechanisms of memory.

Authors:  Natalie C Tronson
Journal:  Curr Opin Behav Sci       Date:  2018-05-07

7.  Sex-Specific Effects of Prenatal Stress on Bdnf Expression in Response to an Acute Challenge in Rats: a Role for Gadd45β.

Authors:  A Luoni; A Berry; C Raggi; V Bellisario; F Cirulli; M A Riva
Journal:  Mol Neurobiol       Date:  2015-12-16       Impact factor: 5.590

8.  brain-coX: investigating and visualising gene co-expression in seven human brain transcriptomic datasets.

Authors:  Saskia Freytag; Rosemary Burgess; Karen L Oliver; Melanie Bahlo
Journal:  Genome Med       Date:  2017-06-08       Impact factor: 11.117

Review 9.  Psychotherapy and Genetic Neuroscience: An Emerging Dialog.

Authors:  Juan P Jiménez; Alberto Botto; Luisa Herrera; Caroline Leighton; José L Rossi; Yamil Quevedo; Jaime R Silva; Felipe Martínez; Rodrigo Assar; Luis A Salazar; Manuel Ortiz; Ulises Ríos; Paulina Barros; Karina Jaramillo; Patrick Luyten
Journal:  Front Genet       Date:  2018-07-17       Impact factor: 4.599

10.  Environment-dependent striatal gene expression in the BACHD rat model for Huntington disease.

Authors:  Arianna Novati; Thomas Hentrich; Zinah Wassouf; Jonasz J Weber; Libo Yu-Taeger; Nicole Déglon; Huu Phuc Nguyen; Julia M Schulze-Hentrich
Journal:  Sci Rep       Date:  2018-04-11       Impact factor: 4.379

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