Literature DB >> 25208897

Ex vivo cultured neuronal networks emit in vivo-like spontaneous activity.

Kazuki Okamoto1, Tomoe Ishikawa, Reimi Abe, Daisuke Ishikawa, Chiaki Kobayashi, Mika Mizunuma, Hiroaki Norimoto, Norio Matsuki, Yuji Ikegaya.   

Abstract

Spontaneous neuronal activity is present in virtually all brain regions, but neither its function nor spatiotemporal patterns are fully understood. Ex vivo organotypic slice cultures may offer an opportunity to investigate some aspects of spontaneous activity, because they self-restore their networks that collapsed during slicing procedures. In hippocampal networks, we compared the levels and patterns of in vivo spontaneous activity to those in acute and cultured slices. We found that the firing rates and excitatory synaptic activity in the in vivo hippocampus are more similar to those in slice cultures compared to acute slices. The soft confidence-weighted algorithm, a machine learning technique without human bias, also revealed that hippocampal slice cultures resemble the in vivo hippocampus in terms of the overall tendency of the parameters of spontaneous activity.

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Year:  2014        PMID: 25208897     DOI: 10.1007/s12576-014-0337-4

Source DB:  PubMed          Journal:  J Physiol Sci        ISSN: 1880-6546            Impact factor:   2.781


  46 in total

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Journal:  Science       Date:  2012-01-20       Impact factor: 47.728

Review 5.  Watching neuronal circuit dynamics through functional multineuron calcium imaging (fMCI).

Authors:  Naoya Takahashi; Takuya Sasaki; Atsushi Usami; Norio Matsuki; Yuji Ikegaya
Journal:  Neurosci Res       Date:  2007-03-13       Impact factor: 3.304

6.  The fractions of short- and long-range connections in the visual cortex.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

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Journal:  J Neurophysiol       Date:  1991-07       Impact factor: 2.714

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Authors:  C Pavlides; J Winson
Journal:  J Neurosci       Date:  1989-08       Impact factor: 6.167

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Journal:  J Neurophysiol       Date:  1995-03       Impact factor: 2.714

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  7 in total

1.  Long-Lived Organotypic Slice Culture Model of the Rat Basolateral Amygdala.

Authors:  Sheldon D Michaelson; Taylor M Müller; Maria Bompolaki; Ana Pamela Miranda Tapia; Heika Silveira Villarroel; James P Mackay; Pauline J Balogun; Janice H Urban; William F Colmers
Journal:  Curr Protoc       Date:  2021-10

2.  Quantitative differences in developmental profiles of spontaneous activity in cortical and hippocampal cultures.

Authors:  Paul Charlesworth; Ellese Cotterill; Andrew Morton; Seth G N Grant; Stephen J Eglen
Journal:  Neural Dev       Date:  2015-01-28       Impact factor: 3.842

3.  The role of dimensionality in neuronal network dynamics.

Authors:  Francesco Paolo Ulloa Severino; Jelena Ban; Qin Song; Mingliang Tang; Ginestra Bianconi; Guosheng Cheng; Vincent Torre
Journal:  Sci Rep       Date:  2016-07-11       Impact factor: 4.379

4.  Rescue of hyperexcitability in hippocampal CA1 neurons from Mecp2 (-/y) mouse through surface potential neutralization.

Authors:  Saju Balakrishnan; Sergej L Mironov
Journal:  PLoS One       Date:  2018-04-05       Impact factor: 3.240

5.  Functional Multiple-Spine Calcium Imaging from Brain Slices.

Authors:  Tomoe Ishikawa; Chiaki Kobayashi; Naoya Takahashi; Yuji Ikegaya
Journal:  STAR Protoc       Date:  2020-10-06

6.  Simultaneous silence organizes structured higher-order interactions in neural populations.

Authors:  Hideaki Shimazaki; Kolia Sadeghi; Tomoe Ishikawa; Yuji Ikegaya; Taro Toyoizumi
Journal:  Sci Rep       Date:  2015-04-28       Impact factor: 4.379

7.  Locally sequential synaptic reactivation during hippocampal ripples.

Authors:  Tomoe Ishikawa; Yuji Ikegaya
Journal:  Sci Adv       Date:  2020-02-12       Impact factor: 14.136

  7 in total

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