Literature DB >> 25208534

Robotic platform for parallelized cultivation and monitoring of microbial growth parameters in microwell plates.

Andreas Knepper1, Michael Heiser1, Florian Glauche1, Peter Neubauer2.   

Abstract

The enormous variation possibilities of bioprocesses challenge process development to fix a commercial process with respect to costs and time. Although some cultivation systems and some devices for unit operations combine the latest technology on miniaturization, parallelization, and sensing, the degree of automation in upstream and downstream bioprocess development is still limited to single steps. We aim to face this challenge by an interdisciplinary approach to significantly shorten development times and costs. As a first step, we scaled down analytical assays to the microliter scale and created automated procedures for starting the cultivation and monitoring the optical density (OD), pH, concentrations of glucose and acetate in the culture medium, and product formation in fed-batch cultures in the 96-well format. Then, the separate measurements of pH, OD, and concentrations of acetate and glucose were combined to one method. This method enables automated process monitoring at dedicated intervals (e.g., also during the night). By this approach, we managed to increase the information content of cultivations in 96-microwell plates, thus turning them into a suitable tool for high-throughput bioprocess development. Here, we present the flowcharts as well as cultivation data of our automation approach.
© 2014 Society for Laboratory Automation and Screening.

Entities:  

Keywords:  assays; consistent bioprocess development; high throughput; laboratory automation; microliter scale; monitoring; scale-down; scale-up; screening

Mesh:

Substances:

Year:  2014        PMID: 25208534     DOI: 10.1177/2211068214547231

Source DB:  PubMed          Journal:  J Lab Autom        ISSN: 2211-0682


  11 in total

1.  Bayesian calibration, process modeling and uncertainty quantification in biotechnology.

Authors:  Laura Marie Helleckes; Michael Osthege; Wolfgang Wiechert; Eric von Lieres; Marco Oldiges
Journal:  PLoS Comput Biol       Date:  2022-03-07       Impact factor: 4.475

2.  Bioprocess automation on a Mini Pilot Plant enables fast quantitative microbial phenotyping.

Authors:  Simon Unthan; Andreas Radek; Wolfgang Wiechert; Marco Oldiges; Stephan Noack
Journal:  Microb Cell Fact       Date:  2015-03-11       Impact factor: 5.328

3.  Engineering microbial consortia for controllable outputs.

Authors:  Stephen R Lindemann; Hans C Bernstein; Hyun-Seob Song; Jim K Fredrickson; Matthew W Fields; Wenying Shou; David R Johnson; Alexander S Beliaev
Journal:  ISME J       Date:  2016-03-11       Impact factor: 10.302

4.  Cellulolytic RoboLector - towards an automated high-throughput screening platform for recombinant cellulase expression.

Authors:  Martina Mühlmann; Martin Kunze; Joaquim Ribeiro; Bertram Geinitz; Christian Lehmann; Ulrich Schwaneberg; Ulrich Commandeur; Jochen Büchs
Journal:  J Biol Eng       Date:  2017-01-07       Impact factor: 4.355

5.  High throughput automated microbial bioreactor system used for clone selection and rapid scale-down process optimization.

Authors:  M Lourdes Velez-Suberbie; John P J Betts; Kelly L Walker; Colin Robinson; Barney Zoro; Eli Keshavarz-Moore
Journal:  Biotechnol Prog       Date:  2017-08-10

6.  Automated Cell Treatment for Competence and Transformation of Escherichia coli in a High-Throughput Quasi-Turbidostat Using Microtiter Plates.

Authors:  Sebastian Hans; Matthias Gimpel; Florian Glauche; Peter Neubauer; Mariano Nicolas Cruz-Bournazou
Journal:  Microorganisms       Date:  2018-06-25

7.  A FRET-based biosensor for the quantification of glucose in culture supernatants of mL scale microbial cultivations.

Authors:  Julia Otten; Niklas Tenhaef; Roman P Jansen; Johannes Döbber; Lisa Jungbluth; Stephan Noack; Marco Oldiges; Wolfgang Wiechert; Martina Pohl
Journal:  Microb Cell Fact       Date:  2019-08-21       Impact factor: 5.328

Review 8.  The fed-batch principle for the molecular biology lab: controlled nutrient diets in ready-made media improve production of recombinant proteins in Escherichia coli.

Authors:  Mirja Krause; Antje Neubauer; Peter Neubauer
Journal:  Microb Cell Fact       Date:  2016-06-17       Impact factor: 5.328

9.  Parallelized microscale fed-batch cultivation in online-monitored microtiter plates: implications of media composition and feed strategies for process design and performance.

Authors:  Holger Morschett; Roman Jansen; Christian Neuendorf; Matthias Moch; Wolfgang Wiechert; Marco Oldiges
Journal:  J Ind Microbiol Biotechnol       Date:  2019-10-31       Impact factor: 3.346

Review 10.  Microbioreactor (micro-Matrix) potential in aerobic and anaerobic conditions with different industrially relevant microbial strains.

Authors:  Sergio D'ambrosio; Michela Ventrone; Alberto Alfano; Chiara Schiraldi; Donatella Cimini
Journal:  Biotechnol Prog       Date:  2021-07-05
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