Literature DB >> 25205501

Prediction of protein structural classes based on feature selection technique.

Hui Ding1, Hao Lin, Wei Chen, Zi-Qiang Li, Feng-Biao Guo, Jian Huang, Nini Rao.   

Abstract

The prediction of protein structural classes is beneficial to understanding folding patterns, functions and interactions of proteins. In this study, we proposed a feature selection-based method to accurately predict protein structural classes. Three datasets with sequence identity lower than 25% were used to test the prediction performance of the method. Through jackknife cross-validation, we have verified that the overall accuracies of these three datasets are 92.1%, 89.7% and 84.0%, respectively. The proposed method is more efficient and accurate than other existing methods. The present study will offer an excellent alternative to other methods for predicting protein structural classes.

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Year:  2014        PMID: 25205501     DOI: 10.1007/s12539-013-0205-6

Source DB:  PubMed          Journal:  Interdiscip Sci        ISSN: 1867-1462            Impact factor:   2.233


  12 in total

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