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Literature DB >> 25202826

RNA-seq studies reveal new insights into p63 and the transcriptomic landscape of the mouse skin.

Jason M Rizzo¹, Rose-Anne Romano², Jonathan Bard³, Satrajit Sinha⁴.

Abstract

Entities: Gene Species

Mesh：

Substances：

Year: 2014 PMID： 25202826 DOI： 10.1038/jid.2014.384

Source DB: PubMed Journal: J Invest Dermatol ISSN： 0022-202X Impact factor: 8.551

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15 in total

1. p63 is essential for regenerative proliferation in limb, craniofacial and epithelial development.

Authors: A Yang; R Schweitzer; D Sun; M Kaghad; N Walker; R T Bronson; C Tabin; A Sharpe; D Caput; C Crum; F McKeon
Journal: Nature Date: 1999-04-22 Impact factor: 49.962

2. p63 is a p53 homologue required for limb and epidermal morphogenesis.

Authors: A A Mills; B Zheng; X J Wang; H Vogel; D R Roop; A Bradley
Journal: Nature Date: 1999-04-22 Impact factor: 49.962

Review 3. RNA sequencing: advances, challenges and opportunities.

Authors: Fatih Ozsolak; Patrice M Milos
Journal: Nat Rev Genet Date: 2010-12-30 Impact factor: 53.242

Review 4. p63 in epithelial survival, germ cell surveillance, and neoplasia.

Authors: Christopher P Crum; Frank D McKeon
Journal: Annu Rev Pathol Date: 2010 Impact factor: 23.472

5. p63, a p53 homolog at 3q27-29, encodes multiple products with transactivating, death-inducing, and dominant-negative activities.

Authors: A Yang; M Kaghad; Y Wang; E Gillett; M D Fleming; V Dötsch; N C Andrews; D Caput; F McKeon
Journal: Mol Cell Date: 1998-09 Impact factor: 17.970

6. Epidermal ablation of Dlx3 is linked to IL-17-associated skin inflammation.

Authors: Joonsung Hwang; Ryosuke Kita; Hyouk-Soo Kwon; Eung Ho Choi; Seung Hun Lee; Mark C Udey; Maria I Morasso
Journal: Proc Natl Acad Sci U S A Date: 2011-06-27 Impact factor: 11.205

7. Cluster analysis and display of genome-wide expression patterns.

Authors: M B Eisen; P T Spellman; P O Brown; D Botstein
Journal: Proc Natl Acad Sci U S A Date: 1998-12-08 Impact factor: 11.205

8. p63 regulates multiple signalling pathways required for ectodermal organogenesis and differentiation.

Authors: Johanna Laurikkala; Marja L Mikkola; Martyn James; Mark Tummers; Alea A Mills; Irma Thesleff
Journal: Development Date: 2006-03-08 Impact factor: 6.868

9. An encyclopedia of mouse DNA elements (Mouse ENCODE).

Authors: John A Stamatoyannopoulos; Michael Snyder; Ross Hardison; Bing Ren; Thomas Gingeras; David M Gilbert; Mark Groudine; Michael Bender; Rajinder Kaul; Theresa Canfield; Erica Giste; Audra Johnson; Mia Zhang; Gayathri Balasundaram; Rachel Byron; Vaughan Roach; Peter J Sabo; Richard Sandstrom; A Sandra Stehling; Robert E Thurman; Sherman M Weissman; Philip Cayting; Manoj Hariharan; Jin Lian; Yong Cheng; Stephen G Landt; Zhihai Ma; Barbara J Wold; Job Dekker; Gregory E Crawford; Cheryl A Keller; Weisheng Wu; Christopher Morrissey; Swathi A Kumar; Tejaswini Mishra; Deepti Jain; Marta Byrska-Bishop; Daniel Blankenberg; Bryan R Lajoie; Gaurav Jain; Amartya Sanyal; Kaun-Bei Chen; Olgert Denas; James Taylor; Gerd A Blobel; Mitchell J Weiss; Max Pimkin; Wulan Deng; Georgi K Marinov; Brian A Williams; Katherine I Fisher-Aylor; Gilberto Desalvo; Anthony Kiralusha; Diane Trout; Henry Amrhein; Ali Mortazavi; Lee Edsall; David McCleary; Samantha Kuan; Yin Shen; Feng Yue; Zhen Ye; Carrie A Davis; Chris Zaleski; Sonali Jha; Chenghai Xue; Alex Dobin; Wei Lin; Meagan Fastuca; Huaien Wang; Roderic Guigo; Sarah Djebali; Julien Lagarde; Tyrone Ryba; Takayo Sasaki; Venkat S Malladi; Melissa S Cline; Vanessa M Kirkup; Katrina Learned; Kate R Rosenbloom; W James Kent; Elise A Feingold; Peter J Good; Michael Pazin; Rebecca F Lowdon; Leslie B Adams
Journal: Genome Biol Date: 2012-08-13 Impact factor: 13.583

10. An active role of the DeltaN isoform of p63 in regulating basal keratin genes K5 and K14 and directing epidermal cell fate.

Authors: Rose-Anne Romano; Kori Ortt; Barbara Birkaya; Kirsten Smalley; Satrajit Sinha
Journal: PLoS One Date: 2009-05-20 Impact factor: 3.240

10 in total

1. Role of chromatin and transcriptional co-regulators in mediating p63-genome interactions in keratinocytes.

Authors: Isha Sethi; Satrajit Sinha; Michael J Buck
Journal: BMC Genomics Date: 2014-11-29 Impact factor: 3.969

2. Transcription factor p63 bookmarks and regulates dynamic enhancers during epidermal differentiation.

Authors: Evelyn N Kouwenhoven; Martin Oti; Hanna Niehues; Simon J van Heeringen; Joost Schalkwijk; Hendrik G Stunnenberg; Hans van Bokhoven; Huiqing Zhou
Journal: EMBO Rep Date: 2015-06-01 Impact factor: 8.807

Review 3. Pathway Regulation of p63, a Director of Epithelial Cell Fate.

Authors: Kathryn Yoh; Ron Prywes
Journal: Front Endocrinol (Lausanne) Date: 2015-04-28 Impact factor: 5.555

4. RNA-seq based transcriptomic map reveals new insights into mouse salivary gland development and maturation.

Authors: Christian Gluck; Sangwon Min; Akinsola Oyelakin; Kirsten Smalley; Satrajit Sinha; Rose-Anne Romano
Journal: BMC Genomics Date: 2016-11-16 Impact factor: 3.969

5. Evolutionary re-wiring of p63 and the epigenomic regulatory landscape in keratinocytes and its potential implications on species-specific gene expression and phenotypes.

Authors: Isha Sethi; Christian Gluck; Huiqing Zhou; Michael J Buck; Satrajit Sinha
Journal: Nucleic Acids Res Date: 2017-08-21 Impact factor: 16.971