Literature DB >> 25195900

Expression, purification, crystallization and preliminary crystallographic analysis of human myotubularin-related protein 3.

Ji Young Son1, Jee Un Lee1, Ki-Young Yoo1, Woori Shin1, Dong-Won Im1, Seung Jun Kim2, Seong Eon Ryu3, Yong-Seok Heo1.   

Abstract

Myotubularin-related proteins are a large family of phosphatases that have the catalytic activity of dephosphorylating the phospholipid molecules phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate. Each of the 14 family members contains a phosphatase catalytic domain, which is inactive in six family members owing to amino-acid changes in a key motif for the activity. All of the members also bear PH-GRAM domains, which have low homologies between them and have roles that are not yet clear. Here, the cloning, expression, purification and crystallization of human myotubularin-related protein 3 encompassing the PH-GRAM and the phosphatase catalytic domain are reported. Preliminary X-ray crystallographic analysis shows that the crystals diffracted to 3.30 Å resolution at a synchrotron X-ray source. The crystals belonged to space group C2, with unit-cell parameters a = 323.3, b = 263.3, c = 149.4 Å, β = 109.7°.

Entities:  

Keywords:  MTMR3; PH-GRAM domain; myotubularin-related proteins; phosphatase; phosphoinositide

Mesh:

Substances:

Year:  2014        PMID: 25195900      PMCID: PMC4157427          DOI: 10.1107/S2053230X14015714

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  20 in total

1.  Antibacterial autophagy occurs at PI(3)P-enriched domains of the endoplasmic reticulum and requires Rab1 GTPase.

Authors:  Ju Huang; Cheryl L Birmingham; Shahab Shahnazari; Jessica Shiu; Yiyu T Zheng; Adam C Smith; Kenneth G Campellone; Won Do Heo; Samantha Gruenheid; Tobias Meyer; Matthew D Welch; Nicholas T Ktistakis; Peter Kijun Kim; Daniel J Klionsky; John H Brumell
Journal:  Autophagy       Date:  2011-01-01       Impact factor: 16.016

Review 2.  The structure and regulation of myotubularin phosphatases.

Authors:  Michael J Begley; Jack E Dixon
Journal:  Curr Opin Struct Biol       Date:  2005-11-09       Impact factor: 6.809

3.  Systematic analysis of myotubularins: heteromeric interactions, subcellular localisation and endosome related functions.

Authors:  Oscar Lorenzo; Sylvie Urbé; Michael J Clague
Journal:  J Cell Sci       Date:  2006-06-20       Impact factor: 5.285

4.  Molecular basis for substrate recognition by MTMR2, a myotubularin family phosphoinositide phosphatase.

Authors:  Michael J Begley; Gregory S Taylor; Melissa A Brock; Partho Ghosh; Virgil L Woods; Jack E Dixon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-12       Impact factor: 11.205

5.  Specificity of the myotubularin family of phosphatidylinositol-3-phosphatase is determined by the PH/GRAM domain.

Authors:  Papiya Choudhury; Shekhar Srivastava; Zhai Li; Kyung Ko; Mamdouh Albaqumi; Kartik Narayan; William A Coetzee; Mark A Lemmon; Edward Y Skolnik
Journal:  J Biol Chem       Date:  2006-08-16       Impact factor: 5.157

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Myotubularin, a phosphatase deficient in myotubular myopathy, acts on phosphatidylinositol 3-kinase and phosphatidylinositol 3-phosphate pathway.

Authors:  F Blondeau; J Laporte; S Bodin; G Superti-Furga; B Payrastre; J L Mandel
Journal:  Hum Mol Genet       Date:  2000-09-22       Impact factor: 6.150

8.  Modulation of local PtdIns3P levels by the PI phosphatase MTMR3 regulates constitutive autophagy.

Authors:  Naoko Taguchi-Atarashi; Maho Hamasaki; Kohichi Matsunaga; Hiroko Omori; Nicholas T Ktistakis; Tamotsu Yoshimori; Takeshi Noda
Journal:  Traffic       Date:  2010-01-06       Impact factor: 6.215

Review 9.  Endosomal phosphoinositides and human diseases.

Authors:  Anne-Sophie Nicot; Jocelyn Laporte
Journal:  Traffic       Date:  2008-04-21       Impact factor: 6.215

10.  Defective autophagy in neurons and astrocytes from mice deficient in PI(3,5)P2.

Authors:  Cole J Ferguson; Guy M Lenk; Miriam H Meisler
Journal:  Hum Mol Genet       Date:  2009-09-29       Impact factor: 6.150

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