Literature DB >> 25190649

A dominant mutation in hexokinase 1 (HK1) causes retinitis pigmentosa.

Lori S Sullivan1, Daniel C Koboldt2, Sara J Bowne1, Steven Lang3, Susan H Blanton3, Elizabeth Cadena1, Cheryl E Avery1, Richard A Lewis4, Kaylie Webb-Jones5, Dianna H Wheaton5, David G Birch5, Razck Coussa6, Huanan Ren6, Irma Lopez6, Christina Chakarova7, Robert K Koenekoop6, Charles A Garcia8, Robert S Fulton2, Richard K Wilson2, George M Weinstock2, Stephen P Daiger9.   

Abstract

PURPOSE: To identify the cause of retinitis pigmentosa (RP) in UTAD003, a large, six-generation Louisiana family with autosomal dominant retinitis pigmentosa (adRP).
METHODS: A series of strategies, including candidate gene screening, linkage exclusion, genome-wide linkage mapping, and whole-exome next-generation sequencing, was used to identify a mutation in a novel disease gene on chromosome 10q22.1. Probands from an additional 404 retinal degeneration families were subsequently screened for mutations in this gene.
RESULTS: Exome sequencing in UTAD003 led to identification of a single, novel coding variant (c.2539G>A, p.Glu847Lys) in hexokinase 1 (HK1) present in all affected individuals and absent from normal controls. One affected family member carries two copies of the mutation and has an unusually severe form of disease, consistent with homozygosity for this mutation. Screening of additional adRP probands identified four other families (American, Canadian, and Sicilian) with the same mutation and a similar range of phenotypes. The families share a rare 450-kilobase haplotype containing the mutation, suggesting a founder mutation among otherwise unrelated families.
CONCLUSIONS: We identified an HK1 mutation in five adRP families. Hexokinase 1 catalyzes phosphorylation of glucose to glucose-6-phosphate. HK1 is expressed in retina, with two abundant isoforms expressed at similar levels. The Glu847Lys mutation is located at a highly conserved position in the protein, outside the catalytic domains. We hypothesize that the effect of this mutation is limited to the retina, as no systemic abnormalities in glycolysis were detected. Prevalence of the HK1 mutation in our cohort of RP families is 1%. Copyright 2014 The Association for Research in Vision and Ophthalmology, Inc.

Entities:  

Keywords:  hexokinase; inherited retinal dystrophy; retinitis pigmentosa

Mesh:

Substances:

Year:  2014        PMID: 25190649      PMCID: PMC4224580          DOI: 10.1167/iovs.14-15419

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  56 in total

1.  The VDAC1 N-terminus is essential both for apoptosis and the protective effect of anti-apoptotic proteins.

Authors:  Salah Abu-Hamad; Nir Arbel; Doron Calo; Laetitia Arzoine; Adrian Israelson; Nurit Keinan; Ronit Ben-Romano; Orr Friedman; Varda Shoshan-Barmatz
Journal:  J Cell Sci       Date:  2009-06-01       Impact factor: 5.285

2.  Crystal structures of mutant monomeric hexokinase I reveal multiple ADP binding sites and conformational changes relevant to allosteric regulation.

Authors:  A E Aleshin; C Kirby; X Liu; G P Bourenkov; H D Bartunik; H J Fromm; R B Honzatko
Journal:  J Mol Biol       Date:  2000-03-03       Impact factor: 5.469

3.  Binding of non-catalytic ATP to human hexokinase I highlights the structural components for enzyme-membrane association control.

Authors:  C Rosano; E Sabini; M Rizzi; D Deriu; G Murshudov; M Bianchi; G Serafini; M Magnani; M Bolognesi
Journal:  Structure       Date:  1999-11-15       Impact factor: 5.006

4.  Next generation sequencing-based molecular diagnosis of retinitis pigmentosa: identification of a novel genotype-phenotype correlation and clinical refinements.

Authors:  Feng Wang; Hui Wang; Han-Fang Tuan; Duy H Nguyen; Vincent Sun; Vafa Keser; Sara J Bowne; Lori S Sullivan; Hongrong Luo; Ling Zhao; Xia Wang; Jacques E Zaneveld; Jason S Salvo; Sorath Siddiqui; Louise Mao; Dianna K Wheaton; David G Birch; Kari E Branham; John R Heckenlively; Cindy Wen; Ken Flagg; Henry Ferreyra; Jacqueline Pei; Ayesha Khan; Huanan Ren; Keqing Wang; Irma Lopez; Raheel Qamar; Juan C Zenteno; Raul Ayala-Ramirez; Beatriz Buentello-Volante; Qing Fu; David A Simpson; Yumei Li; Ruifang Sui; Giuliana Silvestri; Stephen P Daiger; Robert K Koenekoop; Kang Zhang; Rui Chen
Journal:  Hum Genet       Date:  2013-10-24       Impact factor: 4.132

5.  Structure of the 5' region of the human hexokinase type I (HKI) gene and identification of an additional testis-specific HKI mRNA.

Authors:  F Andreoni; A Ruzzo; M Magnani
Journal:  Biochim Biophys Acta       Date:  2000-09-07

Review 6.  Hexokinase: gene structure and mutations.

Authors:  H Kanno
Journal:  Baillieres Best Pract Res Clin Haematol       Date:  2000-03

7.  A method and server for predicting damaging missense mutations.

Authors:  Ivan A Adzhubei; Steffen Schmidt; Leonid Peshkin; Vasily E Ramensky; Anna Gerasimova; Peer Bork; Alexey S Kondrashov; Shamil R Sunyaev
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

8.  A mutation in an alternative untranslated exon of hexokinase 1 associated with hereditary motor and sensory neuropathy -- Russe (HMSNR).

Authors:  Janina Hantke; David Chandler; Rosalind King; Ronald J A Wanders; Dora Angelicheva; Ivailo Tournev; Elyshia McNamara; Marcel Kwa; Velina Guergueltcheva; Radka Kaneva; Frank Baas; Luba Kalaydjieva
Journal:  Eur J Hum Genet       Date:  2009-06-17       Impact factor: 4.246

9.  Application of next-generation sequencing to identify genes and mutations causing autosomal dominant retinitis pigmentosa (adRP).

Authors:  Stephen P Daiger; Sara J Bowne; Lori S Sullivan; Susan H Blanton; George M Weinstock; Daniel C Koboldt; Robert S Fulton; David Larsen; Peter Humphries; Marian M Humphries; Eric A Pierce; Rui Chen; Yumei Li
Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

10.  Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes.

Authors:  Michael H Farkas; Gregory R Grant; Joseph A White; Maria E Sousa; Mark B Consugar; Eric A Pierce
Journal:  BMC Genomics       Date:  2013-07-18       Impact factor: 3.969

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  20 in total

1.  Proteomic profiling of early degenerative retina of RCS rats.

Authors:  Zhi-Hong Zhu; Yan Fu; Chuan-Huang Weng; Cong-Jian Zhao; Zheng-Qin Yin
Journal:  Int J Ophthalmol       Date:  2017-06-18       Impact factor: 1.779

2.  Hexokinase 1 and retinitis pigmentosa: insights into the retina and the molecule.

Authors:  J Fielding Hejtmancik
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-11-07       Impact factor: 4.799

3.  De novo variants in HK1 associated with neurodevelopmental abnormalities and visual impairment.

Authors:  Volkan Okur; Megan T Cho; Richard van Wijk; Brigitte van Oirschot; Jonathan Picker; Stephanie A Coury; Dorothy Grange; Linda Manwaring; Ian Krantz; Colleen Clark Muraresku; Peter J Hulick; Holley May; Eric Pierce; Emily Place; Kinga Bujakowska; Aida Telegrafi; Ganka Douglas; Kristin G Monaghan; Amber Begtrup; Ashley Wilson; Kyle Retterer; Kwame Anyane-Yeboa; Wendy K Chung
Journal:  Eur J Hum Genet       Date:  2019-02-18       Impact factor: 4.246

4.  Identification of a Novel Gene on 10q22.1 Causing Autosomal Dominant Retinitis Pigmentosa (adRP).

Authors:  Stephen P Daiger; Lori S Sullivan; Sara J Bowne; Daniel C Koboldt; Susan H Blanton; Dianna K Wheaton; Cheryl E Avery; Elizabeth D Cadena; Robert K Koenekoop; Robert S Fulton; Richard K Wilson; George M Weinstock; Richard A Lewis; David G Birch
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

Review 5.  A Review of Secondary Photoreceptor Degenerations in Systemic Disease.

Authors:  Naveen Mysore; Jamie Koenekoop; Shen Li; Huanan Ren; Vafa Keser; Irma Lopez-Solache; Robert K Koenekoop
Journal:  Cold Spring Harb Perspect Med       Date:  2014-12-04       Impact factor: 6.915

Review 6.  Genetic characterization and disease mechanism of retinitis pigmentosa; current scenario.

Authors:  Muhammad Umar Ali; Muhammad Saif Ur Rahman; Jiang Cao; Ping Xi Yuan
Journal:  3 Biotech       Date:  2017-07-18       Impact factor: 2.406

7.  Molecular Findings in Families with an Initial Diagnose of Autosomal Dominant Retinitis Pigmentosa (adRP).

Authors:  Stephen P Daiger; Sara J Bowne; Lori S Sullivan; Kari Branham; Dianna K Wheaton; Kaylie D Jones; Cheryl E Avery; Elizabeth D Cadena; John R Heckenlively; David G Birch
Journal:  Adv Exp Med Biol       Date:  2018       Impact factor: 2.622

8.  Whole-exome sequencing revealed HKDC1 as a candidate gene associated with autosomal-recessive retinitis pigmentosa.

Authors:  Lin Zhang; Zixi Sun; Peiquan Zhao; Lulin Huang; Mingchu Xu; Yeming Yang; Xue Chen; Fang Lu; Xiang Zhang; Hui Wang; Shanshan Zhang; Wenjing Liu; Zhilin Jiang; Shi Ma; Rui Chen; Chen Zhao; Zhenglin Yang; Ruifang Sui; Xianjun Zhu
Journal:  Hum Mol Genet       Date:  2018-12-01       Impact factor: 6.150

Review 9.  Genes and Mutations Causing Autosomal Dominant Retinitis Pigmentosa.

Authors:  Stephen P Daiger; Sara J Bowne; Lori S Sullivan
Journal:  Cold Spring Harb Perspect Med       Date:  2014-10-10       Impact factor: 6.915

10.  Witnessing the first sign of retinitis pigmentosa onset in the allegedly normal eye of a case of unilateral RP: a 30-year follow-up.

Authors:  Mathieu Gauvin; Hadi Chakor; Robert K Koenekoop; John M Little; Jean-Marc Lina; Pierre Lachapelle
Journal:  Doc Ophthalmol       Date:  2016-04-04       Impact factor: 2.379

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