| Literature DB >> 25190185 |
Endrias Zewdu Gebremedhin1, Mukarim Abdurahaman, Tesfaye Sisay Tessema, Getachew Tilahun, Eric Cox, Bruno Goddeeris, Pierre Dorny, Stephane De Craeye, Marie-Laure Dardé, Daniel Ajzenberg.
Abstract
BACKGROUND: Toxoplasma gondii is an obligate intracellular protozoan parasite that infects humans and a broad spectrum of warm-blooded vertebrates. The present study was undertaken with the objectives of isolation and determining the genotypes of T. gondii strains from sheep and goats slaughtered in East and West Shewa Zones of Oromia Regional State, Central Ethiopia.Entities:
Mesh:
Year: 2014 PMID: 25190185 PMCID: PMC4161867 DOI: 10.1186/1756-3305-7-425
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Genotyping results of DNA with 15 microsatellite markers from 33 isolates collected in sheep and goats of Central Ethiopia and from 14 reference strains collected in America, Africa, Asia, and Europe
| Microsatellite markers 1 | ||||||||||||||||||
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| Isolate | Type | Origin | Host |
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| TgSpEt2 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | NA | 176 | NA | NA | NA | NA | NA |
| TgSpEt3 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 123 | 259 | 091 | 308 |
| TgSpEt4 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 123 | 259 | 091 | 308 |
| TgGtEt1 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 225 | 172 | 142 | 117 | 259 | 093 | 308 |
| TgGtEt2 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 235 | 176 | 138 | 115 | 279 | 099 | 312 |
| TgGtEt3 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 235 | 176 | 138 | 115 | 279 | 099 | 312 |
| TgGtEt5 | III |
| Goat | 289 | 242 | 205 | 160 | 336 | 165 | 278 | 356 | 213 | 190 | 147 | 113 | 267 | 089 | 312 |
| TgGtEt4 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 237 | 176 | 140 | 113 | 273 | 093 | 312 |
| TgSpEt6 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 176 | 140 | 115 | 265 | 117 | 308 |
| TgGtEt8 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 178 | 142 | 109 | 285 | 085 | 310 |
| TgGtEt212 | II |
| Goat | NA | 242 | NA | 158 | 336 | NA | NA | 356 | NA | NA | NA | NA | NA | NA | 312 |
| TgGtEt222 | II |
| Goat | NA | 242 | NA | 158 | NA | NA | 274 | NA | NA | NA | NA | NA | 279 | NA | 312 |
| TgGtEt12 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 176 | 140 | 115 | 261 | 089 | 308 |
| TgSpEt10 | II |
| Sheep | 289 | NA | 207 | 158 | 336 | 169 | 274 | NA | NA | NA | NA | NA | NA | NA | 312 |
| TgSpEt282 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 176 | 140 | 115 | 261 | 089 | 308 |
| TgGtEt14 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 233 | 174 | 140 | 113 | 269 | 097 | 312 |
| TgGtEt13 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | NA | NA | NA | 140 | 113 | NA | NA | NA |
| TgSpEt19 | Atypical |
| Sheep | 289 | 240 | 201 | 156 | 340 | 163 | 272 | 360 | 209 | 218 | 147 | 127 | 283 | 099 | 342 |
| TgGtEt17 | III |
| Goat | 289 | 242 | 205 | 160 | 336 | 165 | 278 | 356 | 213 | 190 | 147 | 113 | 267 | 089 | 312 |
| TgSpEt18 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 109 | 267 | 091 | 308 |
| TgGtEt16 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 109 | 267 | 091 | 308 |
| TgSpEt22 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 219 | 176 | 140 | 111 | 267 | 097 | 310 |
| TgSpEt20 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 178 | 140 | 115 | 261 | 091 | 308 |
| TgSpEt21 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 109 | 267 | 091 | 308 |
| TgGtEt19 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 215 | 176 | 138 | 117 | 267 | 099 | 312 |
| TgSpEt23 | III |
| Sheep | 289 | 242 | 205 | 160 | 336 | 165 | 278 | 356 | 213 | 190 | 147 | 111 | 271 | 089 | 312 |
| TgSpEt25 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 211 | 176 | 140 | 121 | 267 | 091 | 308 |
| TgSpEt26 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 239 | 176 | 138 | 115 | 281 | 097 | 310 |
| TgSpEt27 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 176 | 140 | 123 | 259 | 091 | 308 |
| TgGtEt20 | II |
| Goat | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 176 | 140 | 115 | 261 | 089 | 308 |
| TgSpEt7 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 225 | 172 | 142 | 117 | 261 | 093 | 308 |
| TgSpEt8 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 213 | 178 | 140 | 115 | 265 | 089 | 308 |
| TgSpEt9 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | NA | NA | 140 | 115 | NA | NA | 316 |
| GAB5-GAL-DOM01 | Africa 1 |
| Chicken | 291 | 248 | 205 | 160 | 342 | 165 | 274 | 354 | 231 | 166 | 149 | 111 | 277 | 087 | 306 |
| CCH002-NIA | Africa 2 |
| Human | 289 | 248 | 205 | 160 | 336 | 165 | 274 | 354 | 225 | 166 | 145 | 111 | 273 | 089 | 308 |
| GAB2-GAL-DOM02 | Africa 3 |
| Human | 291 | 242 | 207 | 160 | 342 | 165 | 278 | 354 | 223 | 166 | 142 | 111 | 277 | 097 | 310 |
| ENT | I |
| Human | 291 | 248 | 209 | 160 | 342 | 169 | 274 | 358 | 209 | 166 | 145 | 119 | 267 | 087 | 306 |
| ME49 | II |
| Sheep | 289 | 242 | 207 | 158 | 336 | 169 | 274 | 356 | 215 | 174 | 142 | 111 | 265 | 091 | 310 |
| NED | III |
| Human | 289 | 242 | 205 | 160 | 336 | 165 | 278 | 356 | 209 | 190 | 147 | 111 | 267 | 091 | 312 |
| VAND | Atypical |
| Human | 291 | 242 | 203 | 162 | 344 | 167 | 276 | 356 | 217 | 170 | 142 | 113 | 277 | 091 | 308 |
| GUY-CAN-FAM01 | Caribbean 1 |
| Dog | 291 | 242 | 205 | 162 | 342 | 165 | 278 | 356 | 213 | 164 | 142 | 109 | 265 | 087 | 312 |
| TgCtPRC04 | Chinese 1 |
| Cat | 293 | 242 | 211 | 160 | 336 | 169 | 274 | 354 | 215 | 172 | 145 | 123 | 281 | 093 | 308 |
| TgCatBr01 | BR II |
| Cat | 289 | 242 | 205 | 160 | 342 | 165 | 278 | 358 | 233 | 164 | 147 | 111 | 316 | 089 | 308 |
| TgCatBr03 | BR III |
| Cat | 289 | 242 | 205 | 160 | 348 | 165 | 278 | 356 | 213 | 190 | 142 | 111 | 263 | 113 | 312 |
| TgCatBr05 | Atypical |
| Cat | 291 | 242 | 205 | 160 | 362 | 165 | 278 | 356 | 237 | 174 | 140 | 111 | 265 | 089 | 314 |
| TgCatBr15 | Atypical |
| Cat | 289 | 242 | 205 | 162 | 344 | 165 | 278 | 358 | 225 | 164 | 142 | 111 | 263 | 105 | 312 |
| TgCkBr81 | BR IV |
| Chicken | 291 | 246 | 207 | 162 | 362 | 169 | 272 | 358 | 217 | 164 | 142 | 105 | 322 | 081 | 314 |
W. Shewa = West Shewa Zone, E. Shewa = East Shewa Zone.
1NA, not amplified, 2 cyst negative but nPCR positive.
Figure 1Neighbor-joining analysis of 33 strains isolated from sheep and goats (TgSp and TgGt) from Ethiopia and 14 reference strains with 15 microsatellite markers. Color-coding indicates the three major clonal types: type I (red), type II (green), and type III (blue). The atypical isolate from Ethiopia, TgSpEt19, is highlighted by a black box.