Literature DB >> 25189217

Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis.

Claudia Racioppi1, Ashwani K Kamal1, Florian Razy-Krajka2, Gennaro Gambardella3, Laura Zanetti1, Diego di Bernardo3, Remo Sanges4, Lionel A Christiaen2, Filomena Ristoratore1.   

Abstract

During the development of the central nervous system (CNS), combinations of transcription factors and signalling molecules orchestrate patterning, specification and differentiation of neural cell types. In vertebrates, three types of melanin-containing pigment cells, exert a variety of functional roles including visual perception. Here we analysed the mechanisms underlying pigment cell specification within the CNS of a simple chordate, the ascidian Ciona intestinalis. Ciona tadpole larvae exhibit a basic chordate body plan characterized by a small number of neural cells. We employed lineage-specific transcription profiling to characterize the expression of genes downstream of fibroblast growth factor signalling, which govern pigment cell formation. We demonstrate that FGF signalling sequentially imposes a pigment cell identity at the expense of anterior neural fates. We identify FGF-dependent and pigment cell-specific factors, including the small GTPase, Rab32/38 and demonstrated its requirement for the pigmentation of larval sensory organs.

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Year:  2014        PMID: 25189217      PMCID: PMC4164782          DOI: 10.1038/ncomms5830

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   17.694


  67 in total

1.  The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program.

Authors:  Olivier Tassy; Delphine Dauga; Fabrice Daian; Daniel Sobral; François Robin; Pierre Khoueiry; David Salgado; Vanessa Fox; Danièle Caillol; Renaud Schiappa; Baptiste Laporte; Anne Rios; Guillaume Luxardi; Takehiro Kusakabe; Jean-Stéphane Joly; Sébastien Darras; Lionel Christiaen; Magali Contensin; Hélène Auger; Clément Lamy; Clare Hudson; Ute Rothbächer; Michael J Gilchrist; Kazuhiro W Makabe; Kohji Hotta; Shigeki Fujiwara; Nori Satoh; Yutaka Satou; Patrick Lemaire
Journal:  Genome Res       Date:  2010-07-20       Impact factor: 9.043

2.  Melanosome maturation defect in Rab38-deficient retinal pigment epithelium results in instability of immature melanosomes during transient melanogenesis.

Authors:  Vanda S Lopes; Christina Wasmeier; Miguel C Seabra; Clare E Futter
Journal:  Mol Biol Cell       Date:  2007-08-01       Impact factor: 4.138

3.  The role of FGF/Erk signaling in pluripotent cells.

Authors:  Fredrik Lanner; Janet Rossant
Journal:  Development       Date:  2010-10       Impact factor: 6.868

Review 4.  Melanosomes--dark organelles enlighten endosomal membrane transport.

Authors:  Graça Raposo; Michael S Marks
Journal:  Nat Rev Mol Cell Biol       Date:  2007-10       Impact factor: 94.444

5.  FGF/MAPK/Ets signaling renders pigment cell precursors competent to respond to Wnt signal by directly controlling Ci-Tcf transcription.

Authors:  Paola Squarzoni; Fateema Parveen; Laura Zanetti; Filomena Ristoratore; Antonietta Spagnuolo
Journal:  Development       Date:  2011-04       Impact factor: 6.868

6.  The dopamine-synthesizing cells in the swimming larva of the tunicate Ciona intestinalis are located only in the hypothalamus-related domain of the sensory vesicle.

Authors:  Frédéric Moret; Lionel Christiaen; Carole Deyts; Maryline Blin; Jean-Stéphane Joly; Philippe Vernier
Journal:  Eur J Neurosci       Date:  2005-06       Impact factor: 3.386

7.  BMPER, a novel endothelial cell precursor-derived protein, antagonizes bone morphogenetic protein signaling and endothelial cell differentiation.

Authors:  Martin Moser; Olav Binder; Yaxu Wu; Julius Aitsebaomo; Rongqin Ren; Christoph Bode; Victoria L Bautch; Frank L Conlon; Cam Patterson
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

8.  Rab38 and Rab32 control post-Golgi trafficking of melanogenic enzymes.

Authors:  Christina Wasmeier; Maryse Romao; Lynn Plowright; Dorothy C Bennett; Graça Raposo; Miguel C Seabra
Journal:  J Cell Biol       Date:  2006-10-16       Impact factor: 10.539

9.  Differential network analysis for the identification of condition-specific pathway activity and regulation.

Authors:  Gennaro Gambardella; Maria Nicoletta Moretti; Rossella de Cegli; Luca Cardone; Adriano Peron; Diego di Bernardo
Journal:  Bioinformatics       Date:  2013-06-06       Impact factor: 6.937

10.  NK4 antagonizes Tbx1/10 to promote cardiac versus pharyngeal muscle fate in the ascidian second heart field.

Authors:  Wei Wang; Florian Razy-Krajka; Eric Siu; Alexandra Ketcham; Lionel Christiaen
Journal:  PLoS Biol       Date:  2013-12-03       Impact factor: 8.029

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  19 in total

1.  Single-cell transcriptome profiling of the Ciona larval brain.

Authors:  Sarthak Sharma; Wei Wang; Alberto Stolfi
Journal:  Dev Biol       Date:  2018-10-28       Impact factor: 3.582

2.  Functional and evolutionary insights from the Ciona notochord transcriptome.

Authors:  Wendy M Reeves; Yuye Wu; Matthew J Harder; Michael T Veeman
Journal:  Development       Date:  2017-09-15       Impact factor: 6.868

3.  Combinatorial chromatin dynamics foster accurate cardiopharyngeal fate choices.

Authors:  Claudia Racioppi; Keira A Wiechecki; Lionel Christiaen
Journal:  Elife       Date:  2019-11-20       Impact factor: 8.140

4.  Diverse ETS transcription factors mediate FGF signaling in the Ciona anterior neural plate.

Authors:  T Blair Gainous; Eileen Wagner; Michael Levine
Journal:  Dev Biol       Date:  2015-01-07       Impact factor: 3.582

5.  Purification of Fluorescent Labeled Cells from Dissociated Ciona Embryos.

Authors:  Wei Wang; Claudia Racioppi; Basile Gravez; Lionel Christiaen
Journal:  Adv Exp Med Biol       Date:  2018       Impact factor: 2.622

6.  FOX and ETS family transcription factors regulate the pigment cell lineage in planarians.

Authors:  Xinwen He; Nicole Lindsay-Mosher; Yan Li; Alyssa M Molinaro; Jason Pellettieri; Bret J Pearson
Journal:  Development       Date:  2017-11-20       Impact factor: 6.868

Review 7.  Tunicate gastrulation.

Authors:  Konner M Winkley; Matthew J Kourakis; Anthony W DeTomaso; Michael T Veeman; William C Smith
Journal:  Curr Top Dev Biol       Date:  2019-11-22       Impact factor: 4.897

8.  Evolutionary recruitment of flexible Esrp-dependent splicing programs into diverse embryonic morphogenetic processes.

Authors:  Demian Burguera; Yamile Marquez; Claudia Racioppi; Jon Permanyer; Antonio Torres-Méndez; Rosaria Esposito; Beatriz Albuixech-Crespo; Lucía Fanlo; Ylenia D'Agostino; Andre Gohr; Enrique Navas-Perez; Ana Riesgo; Claudia Cuomo; Giovanna Benvenuto; Lionel A Christiaen; Elisa Martí; Salvatore D'Aniello; Antonietta Spagnuolo; Filomena Ristoratore; Maria Ina Arnone; Jordi Garcia-Fernàndez; Manuel Irimia
Journal:  Nat Commun       Date:  2017-11-27       Impact factor: 14.919

9.  ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets.

Authors:  Matija Brozovic; Christelle Dantec; Justine Dardaillon; Delphine Dauga; Emmanuel Faure; Mathieu Gineste; Alexandra Louis; Magali Naville; Kazuhiro R Nitta; Jacques Piette; Wendy Reeves; Céline Scornavacca; Paul Simion; Renaud Vincentelli; Maelle Bellec; Sameh Ben Aicha; Marie Fagotto; Marion Guéroult-Bellone; Maximilian Haeussler; Edwin Jacox; Elijah K Lowe; Mickael Mendez; Alexis Roberge; Alberto Stolfi; Rui Yokomori; C Titus Brown; Christian Cambillau; Lionel Christiaen; Frédéric Delsuc; Emmanuel Douzery; Rémi Dumollard; Takehiro Kusakabe; Kenta Nakai; Hiroki Nishida; Yutaka Satou; Billie Swalla; Michael Veeman; Jean-Nicolas Volff; Patrick Lemaire
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

10.  Rab32 and Rab38 genes in chordate pigmentation: an evolutionary perspective.

Authors:  Ugo Coppola; Giovanni Annona; Salvatore D'Aniello; Filomena Ristoratore
Journal:  BMC Evol Biol       Date:  2016-01-27       Impact factor: 3.260

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