Literature DB >> 25177949

Genetic parameters and prediction of genotypic values for root quality traits in cassava using REML/BLUP.

E J Oliveira1, F A Santana2, L A Oliveira3, V S Santos3.   

Abstract

The aim of this study was to estimate the genetic parameters and predict the genotypic values of root quality traits in cassava (Manihot esculenta Crantz) using restricted maximum likelihood (REML) and best linear unbiased prediction (BLUP). A total of 471 cassava accessions were evaluated over two years of cultivation. The evaluated traits included amylose content (AML), root dry matter (DMC), cyanogenic compounds (CyC), and starch yield (StYi). Estimates of the individual broad-sense heritability of AML were low (hg(2) = 0.07 ± 0.02), medium for StYi and DMC, and high for CyC. The heritability of AML was substantially improved based on mean of accessions (hm(2) = 0.28), indicating that some strategies such as increasing the number of repetitions can be used to increase the selective efficiency. In general, the observed genotypic values were very close to the predicted average of the improved population, most likely due to the high accuracy (>0.90), especially for DMC, CyC, and StYi. Gains via selection of the 30 best genotypes for each trait were 4.8 and 3.2% for an increase and decrease for AML, respectively, an increase of 10.75 and 74.62% for DMC for StYi, respectively, and a decrease of 89.60% for CyC in relation to the overall mean of the genotypic values. Genotypic correlations between the quality traits of the cassava roots collected were generally favorable, although they were low in magnitude. The REML/BLUP method was adequate for estimating genetic parameters and predicting the genotypic values, making it useful for cassava breeding.

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Year:  2014        PMID: 25177949     DOI: 10.4238/2014.August.28.13

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN: 1676-5680


  13 in total

1.  Genome-Wide Identification and Expression Analysis of the NAC Transcription Factor Family in Cassava.

Authors:  Wei Hu; Yunxie Wei; Zhiqiang Xia; Yan Yan; Xiaowan Hou; Meiling Zou; Cheng Lu; Wenquan Wang; Ming Peng
Journal:  PLoS One       Date:  2015-08-28       Impact factor: 3.240

2.  Comparative Physiological and Transcriptomic Analyses Reveal the Actions of Melatonin in the Delay of Postharvest Physiological Deterioration of Cassava.

Authors:  Wei Hu; Hua Kong; Yunling Guo; Yuliang Zhang; Zehong Ding; Weiwei Tie; Yan Yan; Qixing Huang; Ming Peng; Haitao Shi; Anping Guo
Journal:  Front Plant Sci       Date:  2016-05-27       Impact factor: 5.753

3.  Genome-Wide Identification and Expression Analysis of the WRKY Gene Family in Cassava.

Authors:  Yunxie Wei; Haitao Shi; Zhiqiang Xia; Weiwei Tie; Zehong Ding; Yan Yan; Wenquan Wang; Wei Hu; Kaimian Li
Journal:  Front Plant Sci       Date:  2016-02-05       Impact factor: 5.753

4.  The ERF transcription factor family in cassava: genome-wide characterization and expression analyses against drought stress.

Authors:  Wei Fan; Meirong Hai; Yunling Guo; Zehong Ding; Weiwei Tie; Xupo Ding; Yan Yan; Yunxie Wei; Yang Liu; Chunlai Wu; Haitao Shi; Kaimian Li; Wei Hu
Journal:  Sci Rep       Date:  2016-11-21       Impact factor: 4.379

5.  The MAPKKK gene family in cassava: Genome-wide identification and expression analysis against drought stress.

Authors:  Jianqiu Ye; Hai Yang; Haitao Shi; Yunxie Wei; Weiwei Tie; Zehong Ding; Yan Yan; Ying Luo; Zhiqiang Xia; Wenquan Wang; Ming Peng; Kaimian Li; He Zhang; Wei Hu
Journal:  Sci Rep       Date:  2017-11-02       Impact factor: 4.379

Review 6.  Genotypic evaluation of twenty-eight high- and low-cyanide cassava in low-land tropics, southeast Nigeria.

Authors:  Emmanuel Ukaobasi Mbah; Blessing Chinwoke Nwankwo; Damian Ndubuisi Njoku; Michael A Gore
Journal:  Heliyon       Date:  2019-06-01

7.  Detection of Quantitative Trait Loci Controlling the Content of Phenolic Compounds in an Asian Plum (Prunus salicina L.) F1 Population.

Authors:  Diego Valderrama-Soto; Juan Salazar; Ailynne Sepúlveda-González; Claudia Silva-Andrade; Claudio Gardana; Héctor Morales; Benjamin Battistoni; Pablo Jiménez-Muñoz; Mauricio González; Álvaro Peña-Neira; Rodrigo Infante; Igor Pacheco
Journal:  Front Plant Sci       Date:  2021-07-09       Impact factor: 5.753

8.  Genome-wide characterization and analysis of bZIP transcription factor gene family related to abiotic stress in cassava.

Authors:  Wei Hu; Hubiao Yang; Yan Yan; Yunxie Wei; Weiwei Tie; Zehong Ding; Jiao Zuo; Ming Peng; Kaimian Li
Journal:  Sci Rep       Date:  2016-03-07       Impact factor: 4.379

9.  Expression Patterns and Identified Protein-Protein Interactions Suggest That Cassava CBL-CIPK Signal Networks Function in Responses to Abiotic Stresses.

Authors:  Chunyan Mo; Shumin Wan; Youquan Xia; Ning Ren; Yang Zhou; Xingyu Jiang
Journal:  Front Plant Sci       Date:  2018-03-02       Impact factor: 5.753

10.  The Late Embryogenesis Abundant Protein Family in Cassava (Manihot esculenta Crantz): Genome-Wide Characterization and Expression during Abiotic Stress.

Authors:  Chunlai Wu; Wei Hu; Yan Yan; Weiwei Tie; Zehong Ding; Jianchun Guo; Guangyuan He
Journal:  Molecules       Date:  2018-05-17       Impact factor: 4.411

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