| Literature DB >> 25161719 |
Carla I Nieto1, Pilar Cabildo1, M Ángeles García1, Rosa M Claramunt1, Ibon Alkorta2, José Elguero2.
Abstract
This paper reports the (1)H, (13)C and (15)N NMR experimental study of five benzimidazoles in solution and in the solid state ((13)C and (15)N CPMAS NMR) as well as the theoretically calculated (GIAO/DFT) chemical shifts. We have assigned unambiguously the "tautomeric positions" (C3a/C7a, C4/C7 and C5/C6) of NH-benzimidazoles that, in some solvents and in the solid state, appear different (blocked tautomerism). In the case of 1H-benzimidazole itself we have measured the prototropic rate in HMPA-d 18.Entities:
Keywords: CPMAS; DNMR; GIAO; proton transfer; tautomerism
Year: 2014 PMID: 25161719 PMCID: PMC4142846 DOI: 10.3762/bjoc.10.168
Source DB: PubMed Journal: Beilstein J Org Chem ISSN: 1860-5397 Impact factor: 2.883
Figure 1The five studied compounds.
Figure 2Trimers A (left) and B (right) of 1.
Figure 3The tautomerism of 1H-benzimidazole.
Calculated and experimental 1H and 13C chemical shifts of the benzene part.
| Compound | 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. |
| 4 | 7.81 | 7.79 | 7.54 | 121.67 | 119.58 | 118.7 | 119.4 |
| 5 | 7.20 | 7.34 | 7.11 | 121.68 | 121.79 | 120.1 | 123.0 |
| 6 | 7.24 | 7.41 | 7.11 | 122.88 | 123.04 | 121.2 | 123.8 |
| 7 | 7.32 | 7.67 | 7.42 | 108.23 | 110.99 | 110.9 | 112.9 |
| 3a | – | – | – | 144.67 | 144.22 | 143.4 | 143.1 |
| 7a | – | – | – | 132.70 | 133.54 | 133.7 | 136.4 |
| 4 | 7.89 | 7.93 | 7.54 | 119.85 | 118.28 | 118.7 | 119.4 |
| 5 | 7.26 | 7.39 | 7.11 | 122.10 | 121.91 | 120.1 | 123.0 |
| 6 | 7.28 | 7.39 | 7.11 | 122.93 | 122.73 | 121.2 | 123.8 |
| 7 | 7.49 | 7.77 | 7.42 | 110.00 | 111.88 | 110.9 | 112.9 |
| 3a | – | – | – | 143.85 | 143.62 | 143.4 | 143.1 |
| 7a | – | – | – | 134.13 | 134.76 | 133.7 | 136.4 |
| 4 | 7.91 | 7.90 | 7.54 | 119.99 | 118.42 | 118.7 | 119.4 |
| 5 | 7.28 | 7.38 | 7.11 | 122.02 | 121.87 | 120.1 | 123.0 |
| 6 | 7.26 | 7.39 | 7.11 | 122.72 | 122.68 | 121.2 | 123.8 |
| 7 | 7.48 | 7.75 | 7.42 | 110.18 | 112.00 | 110.9 | 112.9 |
| 3a | – | – | – | 143.84 | 143.35 | 143.4 | 143.1 |
| 7a | – | – | – | 134.04 | 134.62 | 133.7 | 136.4 |
| Compound | 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. CPMAS |
| 4/7 | 7.695 | 7.825 | 7.58 | 115.08 | 115.21 | 115.3 | |
| 5/6 | 7.27 | 7.385 | 7.17 | 122.37 | 122.28 | 121.7 | |
| 3a/7a | – | 138.94 | 138.98 | 138.4 | |||
| NH | 12.44 | ||||||
| 4 | 7.70 | 7.68 | 7.47 | 120.78 | 118.54 | 117.8 | 117.4 |
| 5 | 7.11 | 7.23 | 7.11 | 121.22 | 121.09 | 120.7 | 121.7 |
| 6 | 7.06 | 7.21 | 7.10 | 121.91 | 121.86 | 121.2 | 121.7 |
| 7 | 7.21 | 7.54 | 7.40 | 107.79 | 110.32 | 110.5 | 111.6 |
| 3a | – | – | – | 145.08 | 144.60 | 143.5 | 142.9 |
| 7a | – | – | – | 135.53 | 136.25 | 134.3 | 134.7 |
| NH | 12.14 | ||||||
| 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. CPMAS | |
| 4 | 7.87 | 7.88 | 7.72 | 122.65 | 120.89 | 120.8 | 114.7 |
| 5 | 7.43 | 7.59 | 7.37 | 124.08 | 124.84 | 123.2 | 120.3 |
| 6 | 7.37 | 7.57 | 7.42 | 125.89 | 126.68 | 125.1 | 128.1 |
| 7 | 7.31 | 7.67 | 7.58 | 109.07 | 112.00 | 112.9 | 108.2 |
| 3a | – | – | – | 144.54 | 143.87 | 142.9 | |
| 7a | – | – | – | 132.27 | 133.24 | 135.1 | |
| NH | 15.05 | ||||||
| 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. CPMAS | |
| 4 | 7.74 | 7.70 | 7.52 | 120.46 | 118.51 | 118.3 | 120.2 |
| 5 | 7.27 | 7.38 | 7.10 | 121.91 | 122.22 | 120.9 | 123.0 |
| 6 | 7.12 | 7.28 | 7.11 | 122.64 | 122.79 | 121.6 | 124.8 |
| 7 | 6.95 | 7.32 | 7.40 | 107.24 | 109.79 | 110.9 | 113.5 |
| 3a | – | – | – | 144.14 | 143.43 | 143.4 | 143.0 |
| 7a | – | – | – | 134.27 | 135.43 | 134.3 | 135.2 |
| NH | 12.28 | ||||||
| 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. CPMAS | |
| 4 | 7.80 | 7.77 | 7.64a | 121.81 | 119.62 | 119.2 | 119.1 |
| 5 | 7.23 | 7.36 | 7.19a | 121.55 | 121.73 | 121.3 | 121.2 |
| 6 | 7.20 | 7.36 | 7.25a | 122.32 | 122.53 | 122.1 | 123.2 |
| 7 | 7.24 | 7.59 | 7.54a | 106.50 | 109.36 | 110.1 | 110.7 |
| 3a | – | – | – | 146.49 | 145.60 | 143.3 | 143.4 |
| 7a | – | – | – | 135.58 | 136.21 | 134.5 | 134.7 |
a 3J45 = 7.89, 4J46 = 1.26, 5J47 = 0.78, 3J56 = 7.14, 4J57 = 1.30, 3J67 = 7.99 Hz.
Calculated and experimental 13C chemical shifts of the imidazole and substituent parts.
| Compound | 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. CPMAS |
| 2 | 7.64 | 7.95 | 8.21 | 136.78 | 140.77 | 141.6 | 143.1 |
| 2 | 8.01 | 8.32 | 8.21 | 139.05 | 141.86 | 141.6 | 143.1 |
| 2 | 7.95 | 8.24 | 8.21 | 138.24 | 141.16 | 141.6 | 143.1 |
| Compound | 1H calcd | 1H calcd | 1H exp. | 13C calcd | 13C calcd | 13C exp. | 13C exp. CPMAS |
| 2 | 8.20 | 141.9 | |||||
| 2 | – | – | – | 146.54 | 151.70 | 151.2 | 153.6 |
| Me | 2.41 | 2.50 | 2.47 | 14.37 | 14.42 | 14.6 | 12.6 |
| 13C exp | |||||||
| 2 | – | – | – | 138.96 | 139.54 | 140.8 | 135.2 |
| CF3 | – | – | – | 123.53 | 123.96 | 120.0 | 116.0 |
| 2 | – | – | – | 151.48 | 155.02 | 153.5 | 157.1 |
| CH2 | 4.18 | 4.22 | 35.0 | 38.73 | 38.42 | 35.0 | 36.0 |
| C | – | – | – | 139.73 | 139.83 | 137.7 | 136.2 |
| C | 7.30 | 7.54 | 7.30 | 129.32 | 129.28 | 128.5 | ~127 |
| C | 7.38 | 7.49 | 7.33 | 128.76 | 129.44 | 128.8 | ~127 |
| C | 7.34 | 7.38 | 7.22 | 126.76 | 127.15 | 126.5 | 124.3 |
| 2 | 7.41 | 7.74 | 8.16c | 140.83 | 144.14 | 144.5 | 144.6 |
| NMe | 3.62 | 3.80 | 3.82c | 29.78 | 30.69 | 30.6 | 29.7 |
aIn HMPA-d 273 K; b 19F calc.: −63.35 (gas), −63.84 (DMSO); 19F exp.: −62.8 (HMPA-d18); −61.2 (CPMAS). c 4JHMe = 0.42 Hz.
Calculated and experimental 15N chemical shifts of the imidazole part.
| Compound | 15N calcd gas | 15N calcd DMSO | 15N exp. HMPA- | 15N exp. CPMAS |
| N1 | −247.63 | −240.09 | −228.4 | −221.8 |
| N3 | −125.53 | −140.75 | −134.0 | −143.9 |
| N1 | −227.89 | −222.08 | −228.4 | −221.8 |
| N3 | −142.23 | −149.24 | −134.0 | −143.9 |
| N1 | −227.80 | −221.92 | −228.4 | −221.8 |
| N3 | −142.21 | −149.18 | −134.0 | −143.9 |
| Compound | 15N calcd gas | 15N calcd DMSO | 15N exp. DMSO- | 15N exp. CPMAS |
| N1/N3 | −186.58 | −190.42 | a | |
| N1 | −246.87 | −240.39 | −230.3 | −219.5, −224.2 |
| N3 | −127.73 | −142.15 | −137.9 | −146.9 |
| 15N exp HMPA- | ||||
| N1 | −247.40 | −241.51 | −230.4 | −225.9 |
| N3 | −120.36 | −132.07 | a | −142.8 |
| N1 | −245.40 | −241.11 | −230.8 | −221.8 |
| N3 | −130.39 | −141.51 | −136.6 | −147.2 |
| N1 | −241.25 | −232.11 | −235.6 | −233.4 |
| N3 | −128.38 | −143.76 | −136.4 | −135.4 |
aNot observed; bIn HMPA-d18 273 K.
Figure 4The 13C CPMAS NMR spectrum of 3.
Figure 5The two independent molecules of 3 drawn with the Mercury program [26].
Linear regression equations, intercepts in ppm. If not specified, both trimers yield the same results.
| Eq. | No | Intercept | Slope | R2 | Atom | Exp. | Calcd |
| 1 | 26 | (3.2 ± 0.7) | (0.55 ± 0.10) | 0.563 | 1H | solution | gas phase |
| 2 | 26 | (1.2 ± 0.6) | (0.81 ± 0.08) | 0.797 | 1H | solution | DMSO |
| 3 | 59 | −(0.2 ± 1.3) | (1.00 ± 0.01) | 0.993 | 13C | solution | gas phase |
| 4 | 59 | −(0.7 ± 0.7) | (1.000 ± 0.001) | 0.998 | 13C | solution | DMSO |
| 5 | 59 | −(0.7 ± 2.0) | (1.01 ± 0.02) | 0.987 | 13C | CPMAS | gas phase |
| 6 | 59 | −(0.8 ± 1.2) | (1.01 ± 0.01) | 0.993 | 13C | CPMAS | DMSO |
| 7a | 58 | −(0.2 ± 1.3) | (1.00 ± 0.01) | 0.994 | 13C | solution | gas phase |
| 8a | 58 | −(0.7 ± 0.7) | (1.000 ± 0.005) | 0.998 | 13C | solution | DMSO |
| 9a | 53 | −(0.6 ± 1.9) | (1.01 ± 0.02) | 0.989 | 13C | CPMAS | gas phase |
| 10a | 53 | −(1.1 ± 1.3) | (1.01 ± 0.01) | 0.995 | 13C | CPMAS | DMSO |
| 11 | 6 | (6.6 ± 7.2) | (0.95 ± 0.06) | 0.986 | 13C | CPMAS | monomerb |
| 12 | 6 | (5.2 ± 3.3) | (0.96 ± 0.03) | 0.997 | 13C | CPMAS | trimer Ab |
| 13 | 6 | (3.7 ± 3.4) | (0.98 ± 0.03) | 0.997 | 13C | CPMAS | trimer Bb |
| 14 | 14 | −(22.3 ± 7.3) | (0.86 ± 0.04) | 0.978 | 15N | solution | gas |
| 15 | 14 | (10.5 ± 9.1) | (1.02 ± 0.05) | 0.976 | 15N | solution | DMSO |
| 16 | 14 | −(51.0 ± 7.1) | (0.72 ± 0.04) | 0.970 | 15N | CPMAS | gas |
| 17 | 14 | −(23.5 ± 7.5) | (0.86 ± 0.04) | 0.976 | 15N | CPMAS | DMSO |
| 18 | 10 | −(1.4 ± 6.6) | (0.96 ± 0.03) | 0.991 | 15N | solution | monomerb |
| 19 | 10 | (6.6 ± 10.4) | (1.00 ± 0.05) | 0.979 | 15N | solution | trimerb |
| 20 | 10 | −(29.8 ± 5.3) | (0.82 ± 0.03) | 0.991 | 15N | CPMAS | monomerb |
| 21 | 10 | −(23.8 ± 7.5) | (0.85 ± 0.04) | 0.984 | 15N | CPMAS | trimerb |
aThe 13C signal of the CF3 group has been removed. bDMSO calculations.
Figure 6The evolution of the spectrum of 1 with temperature in HMPA-d18.