Literature DB >> 25161575

Diethyl 4-(biphenyl-4-yl)-2,6-dimethyl-1,4-di-hydro-pyridine-3,5-di-carboxyl-ate.

Scott A Steiger1, Anthony J Monacelli2, Chun Li2, Janet L Hunting2, Nicholas R Natale1.   

Abstract

The title compound, C25H27NO4, has a flattened di-hydro-pyridine ring. The benzene and phenyl rings are synclinal to one another, forming a dihedral angle of 49.82 (8)°; the axis of the biphenyl rings makes an 81.05 (9)° angle to the plane of the di-hydro-pyridine ring. In the crystal, N-H⋯O hydrogen bonds link the mol-ecules into chain motifs running along the a-axis direction. The chains are cross-linked by C-H⋯O inter-actions, forming sheet motifs running slightly off the (110) plane, together with an intermolecular interaction between head-to tail biphenyl groups, thus making the whole crystal packing a three-dimensional network. Intra-molecular C-H⋯O hydrogen bonds are also observed.

Entities:  

Year:  2014        PMID: 25161575      PMCID: PMC4120632          DOI: 10.1107/S1600536814013294

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general structure–activity relationship studies of 1,4-di­hydro­pyridines (DHPs) as calcium channel modulators, see: Bossert et al. (1981 ▶); Triggle (2003 ▶). For binding studies of DHPs to multiple drug resistant protein 1 (MDR1), see: Abe et al. (1995 ▶); Cole et al. (1989 ▶); Tasaki et al. (1995 ▶); Vanhoefer et al. (1999 ▶); Tolomero et al. (1994 ▶); Cindric et al. (2010 ▶).

Experimental

Crystal data

C25H27NO4 M = 405.47 Triclinic, a = 7.3431 (3) Å b = 10.6075 (4) Å c = 13.8449 (6) Å α = 85.762 (3)° β = 88.124 (3)° γ = 73.530 (2)° V = 1031.25 (7) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.15 × 0.14 × 0.13 mm

Data collection

Bruker SMART BREEZE CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2012 ▶) T min = 0.919, T max = 1.000 19956 measured reflections 4752 independent reflections 2983 reflections with I > 2σ(I) R int = 0.072

Refinement

R[F 2 > 2σ(F 2)] = 0.062 wR(F 2) = 0.149 S = 1.02 4752 reflections 279 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.43 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2012 ▶); cell refinement: SAINT (Bruker, 2012 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814013294/zl2590sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814013294/zl2590Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814013294/zl2590Isup3.cml Additional supporting information: crystallographic information; 3D view; checkCIF report
C25H27NO4Z = 2
Mr = 405.47F(000) = 432
Triclinic, P1Dx = 1.306 Mg m3
a = 7.3431 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.6075 (4) ÅCell parameters from 5122 reflections
c = 13.8449 (6) Åθ = 2.4–27.4°
α = 85.762 (3)°µ = 0.09 mm1
β = 88.124 (3)°T = 100 K
γ = 73.530 (2)°Prism, pale white
V = 1031.25 (7) Å30.15 × 0.14 × 0.13 mm
Bruker SMART BREEZE CCD diffractometer2983 reflections with I > 2σ(I)
Radiation source: 2 kW sealed X-ray tubeRint = 0.072
φ and ω scansθmax = 27.6°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2012)h = −9→9
Tmin = 0.919, Tmax = 1.000k = −13→13
19956 measured reflectionsl = −17→18
4752 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.062H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.149w = 1/[σ2(Fo2) + (0.0537P)2 + 0.8331P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max = 0.001
4752 reflectionsΔρmax = 0.43 e Å3
279 parametersΔρmin = −0.37 e Å3
0 restraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O30.1263 (2)0.73985 (17)0.98682 (13)0.0183 (4)
O10.4574 (2)0.44644 (15)0.75695 (12)0.0149 (4)
O40.2751 (2)0.84869 (17)1.07429 (13)0.0191 (4)
N10.7805 (3)0.68215 (19)0.92579 (15)0.0127 (5)
O20.7739 (2)0.38137 (18)0.73785 (14)0.0248 (5)
C30.4394 (3)0.6641 (2)0.85636 (17)0.0111 (5)
H30.34080.61530.86190.013*
C40.4521 (3)0.7191 (2)0.95378 (17)0.0115 (5)
C200.1965 (3)1.0952 (2)0.55708 (17)0.0118 (5)
C140.3787 (3)0.7763 (2)0.77713 (17)0.0107 (5)
C250.2602 (3)1.0854 (2)0.46091 (18)0.0156 (5)
H250.33841.00370.44060.019*
C10.7918 (3)0.5861 (2)0.86166 (17)0.0122 (5)
C180.2529 (3)0.8563 (2)0.61659 (18)0.0141 (5)
H180.20850.83830.55690.017*
C50.6197 (3)0.7352 (2)0.98050 (17)0.0112 (5)
C20.6293 (3)0.5673 (2)0.83079 (17)0.0118 (5)
C70.2713 (3)0.7670 (2)1.00548 (18)0.0136 (5)
C210.0758 (3)1.2152 (2)0.58379 (18)0.0138 (5)
H210.02901.22310.64850.017*
C220.0236 (3)1.3226 (2)0.51739 (19)0.0167 (6)
H22−0.06011.40310.53650.020*
C170.2607 (3)0.9835 (2)0.63075 (17)0.0107 (5)
C160.3313 (3)1.0043 (2)0.71876 (18)0.0144 (5)
H160.33981.08970.73010.017*
C60.6587 (3)0.8067 (2)1.06364 (18)0.0163 (6)
H6A0.79620.78831.07110.025*
H6B0.60330.77681.12330.025*
H6C0.60210.90171.05080.025*
C190.3093 (3)0.7555 (2)0.68872 (18)0.0139 (5)
H190.30040.67010.67760.017*
C150.3893 (3)0.9031 (2)0.78989 (18)0.0125 (5)
H150.43740.92040.84880.015*
C130.9930 (3)0.5135 (3)0.8374 (2)0.0204 (6)
H13A1.05060.57170.79650.031*
H13B0.99460.43600.80250.031*
H13C1.06540.48530.89720.031*
C80.0994 (3)0.9041 (2)1.12773 (18)0.0152 (5)
H8A0.06080.83371.16670.018*
H8B−0.00410.94961.08250.018*
C100.6336 (3)0.4574 (2)0.77147 (18)0.0146 (5)
C90.1404 (4)1.0005 (2)1.19262 (19)0.0195 (6)
H9A0.18381.06721.15320.029*
H9B0.23950.95351.23860.029*
H9C0.02461.04331.22830.029*
C230.0929 (4)1.3132 (2)0.42313 (19)0.0177 (6)
H230.06031.38780.37810.021*
C240.2102 (3)1.1940 (2)0.39484 (19)0.0168 (6)
H240.25641.18680.33000.020*
C110.4471 (4)0.3420 (2)0.69640 (18)0.0176 (6)
H11A0.32490.32130.70910.021*
H11B0.55070.26160.71410.021*
C120.4631 (4)0.3793 (3)0.59046 (19)0.0245 (6)
H12A0.44540.30930.55260.037*
H12B0.58910.39120.57630.037*
H12C0.36540.46180.57330.037*
H10.893 (4)0.696 (3)0.9411 (19)0.023 (8)*
U11U22U33U12U13U23
O30.0103 (9)0.0255 (10)0.0221 (11)−0.0085 (8)0.0015 (7)−0.0084 (8)
O10.0152 (9)0.0113 (9)0.0194 (10)−0.0046 (7)0.0007 (7)−0.0057 (7)
O40.0115 (9)0.0269 (10)0.0210 (10)−0.0064 (8)0.0055 (7)−0.0145 (8)
N10.0078 (10)0.0152 (11)0.0168 (12)−0.0054 (9)0.0013 (8)−0.0049 (9)
O20.0154 (9)0.0238 (10)0.0328 (12)0.0018 (8)−0.0007 (8)−0.0158 (9)
C30.0091 (11)0.0108 (12)0.0145 (13)−0.0040 (9)−0.0004 (10)−0.0026 (10)
C40.0122 (12)0.0108 (12)0.0110 (13)−0.0026 (9)0.0003 (9)0.0000 (9)
C200.0106 (12)0.0127 (12)0.0127 (13)−0.0044 (10)−0.0018 (10)−0.0002 (10)
C140.0068 (11)0.0106 (12)0.0130 (13)0.0005 (9)0.0019 (9)−0.0018 (10)
C250.0126 (12)0.0170 (13)0.0181 (14)−0.0047 (10)−0.0010 (10)−0.0039 (11)
C10.0108 (12)0.0119 (12)0.0126 (13)−0.0016 (10)−0.0005 (10)0.0021 (10)
C180.0143 (12)0.0145 (13)0.0128 (14)−0.0018 (10)−0.0022 (10)−0.0052 (10)
C50.0126 (12)0.0093 (11)0.0118 (13)−0.0038 (9)−0.0001 (10)0.0011 (10)
C20.0131 (12)0.0111 (12)0.0120 (13)−0.0050 (10)0.0003 (10)0.0006 (10)
C70.0142 (12)0.0131 (12)0.0136 (14)−0.0044 (10)−0.0007 (10)0.0012 (10)
C210.0149 (12)0.0138 (12)0.0126 (13)−0.0033 (10)−0.0010 (10)−0.0028 (10)
C220.0154 (13)0.0113 (12)0.0229 (15)−0.0020 (10)−0.0035 (11)−0.0040 (11)
C170.0076 (11)0.0116 (12)0.0119 (13)−0.0013 (9)0.0018 (9)−0.0011 (10)
C160.0161 (13)0.0114 (12)0.0168 (14)−0.0051 (10)0.0004 (10)−0.0032 (10)
C60.0125 (12)0.0205 (13)0.0167 (14)−0.0050 (10)−0.0001 (10)−0.0040 (11)
C190.0129 (12)0.0091 (12)0.0191 (14)−0.0017 (10)0.0003 (10)−0.0020 (10)
C150.0131 (12)0.0147 (12)0.0109 (13)−0.0050 (10)−0.0022 (10)−0.0033 (10)
C130.0133 (13)0.0238 (14)0.0220 (15)−0.0003 (11)0.0000 (11)−0.0078 (12)
C80.0102 (12)0.0200 (13)0.0145 (14)−0.0024 (10)0.0040 (10)−0.0048 (11)
C100.0147 (13)0.0121 (12)0.0156 (14)−0.0016 (10)−0.0009 (10)0.0002 (10)
C90.0163 (13)0.0194 (14)0.0230 (16)−0.0041 (11)0.0036 (11)−0.0089 (11)
C230.0221 (14)0.0155 (13)0.0163 (14)−0.0075 (11)−0.0065 (11)0.0048 (11)
C240.0172 (13)0.0244 (14)0.0108 (13)−0.0091 (11)−0.0004 (10)−0.0011 (11)
C110.0228 (14)0.0110 (12)0.0203 (15)−0.0052 (11)0.0002 (11)−0.0081 (11)
C120.0253 (15)0.0329 (16)0.0195 (15)−0.0135 (13)−0.0007 (12)−0.0067 (12)
O3—C71.219 (3)C21—C221.382 (3)
O1—C101.354 (3)C22—H220.9500
O1—C111.458 (3)C22—C231.385 (4)
O4—C71.340 (3)C17—C161.396 (3)
O4—C81.459 (3)C16—H160.9500
N1—C11.383 (3)C16—C151.385 (3)
N1—C51.383 (3)C6—H6A0.9800
N1—H10.91 (3)C6—H6B0.9800
O2—C101.217 (3)C6—H6C0.9800
C3—H31.0000C19—H190.9500
C3—C41.525 (3)C15—H150.9500
C3—C141.536 (3)C13—H13A0.9800
C3—C21.527 (3)C13—H13B0.9800
C4—C51.356 (3)C13—H13C0.9800
C4—C71.464 (3)C8—H8A0.9900
C20—C251.398 (3)C8—H8B0.9900
C20—C211.396 (3)C8—C91.506 (3)
C20—C171.484 (3)C9—H9A0.9800
C14—C191.397 (3)C9—H9B0.9800
C14—C151.392 (3)C9—H9C0.9800
C25—H250.9500C23—H230.9500
C25—C241.388 (4)C23—C241.388 (3)
C1—C21.352 (3)C24—H240.9500
C1—C131.500 (3)C11—H11A0.9900
C18—H180.9500C11—H11B0.9900
C18—C171.395 (3)C11—C121.500 (4)
C18—C191.389 (3)C12—H12A0.9800
C5—C61.502 (3)C12—H12B0.9800
C2—C101.468 (3)C12—H12C0.9800
C21—H210.9500
C10—O1—C11115.95 (18)C5—C6—H6B109.5
C7—O4—C8117.92 (18)C5—C6—H6C109.5
C1—N1—H1115.9 (17)H6A—C6—H6B109.5
C5—N1—C1123.2 (2)H6A—C6—H6C109.5
C5—N1—H1119.4 (17)H6B—C6—H6C109.5
C4—C3—H3108.3C14—C19—H19119.1
C4—C3—C14110.48 (18)C18—C19—C14121.8 (2)
C4—C3—C2110.09 (19)C18—C19—H19119.1
C14—C3—H3108.3C14—C15—H15119.2
C2—C3—H3108.3C16—C15—C14121.6 (2)
C2—C3—C14111.20 (19)C16—C15—H15119.2
C5—C4—C3119.3 (2)C1—C13—H13A109.5
C5—C4—C7124.8 (2)C1—C13—H13B109.5
C7—C4—C3115.4 (2)C1—C13—H13C109.5
C25—C20—C17121.4 (2)H13A—C13—H13B109.5
C21—C20—C25118.4 (2)H13A—C13—H13C109.5
C21—C20—C17120.2 (2)H13B—C13—H13C109.5
C19—C14—C3121.1 (2)O4—C8—H8A110.5
C15—C14—C3121.9 (2)O4—C8—H8B110.5
C15—C14—C19117.0 (2)O4—C8—C9106.34 (19)
C20—C25—H25119.7H8A—C8—H8B108.7
C24—C25—C20120.5 (2)C9—C8—H8A110.5
C24—C25—H25119.7C9—C8—H8B110.5
N1—C1—C13112.5 (2)O1—C10—C2112.0 (2)
C2—C1—N1118.8 (2)O2—C10—O1121.3 (2)
C2—C1—C13128.7 (2)O2—C10—C2126.7 (2)
C17—C18—H18119.6C8—C9—H9A109.5
C19—C18—H18119.6C8—C9—H9B109.5
C19—C18—C17120.8 (2)C8—C9—H9C109.5
N1—C5—C6112.8 (2)H9A—C9—H9B109.5
C4—C5—N1118.6 (2)H9A—C9—H9C109.5
C4—C5—C6128.6 (2)H9B—C9—H9C109.5
C1—C2—C3119.2 (2)C22—C23—H23120.2
C1—C2—C10120.9 (2)C22—C23—C24119.6 (2)
C10—C2—C3119.9 (2)C24—C23—H23120.2
O3—C7—O4121.7 (2)C25—C24—C23120.3 (2)
O3—C7—C4124.1 (2)C25—C24—H24119.9
O4—C7—C4114.2 (2)C23—C24—H24119.9
C20—C21—H21119.5O1—C11—H11A109.1
C22—C21—C20120.9 (2)O1—C11—H11B109.1
C22—C21—H21119.5O1—C11—C12112.4 (2)
C21—C22—H22119.9H11A—C11—H11B107.9
C21—C22—C23120.2 (2)C12—C11—H11A109.1
C23—C22—H22119.9C12—C11—H11B109.1
C18—C17—C20122.8 (2)C11—C12—H12A109.5
C18—C17—C16117.5 (2)C11—C12—H12B109.5
C16—C17—C20119.7 (2)C11—C12—H12C109.5
C17—C16—H16119.3H12A—C12—H12B109.5
C15—C16—C17121.3 (2)H12A—C12—H12C109.5
C15—C16—H16119.3H12B—C12—H12C109.5
C5—C6—H6A109.5
N1—C1—C2—C38.3 (3)C14—C3—C2—C10−87.0 (3)
N1—C1—C2—C10−173.2 (2)C25—C20—C21—C22−1.3 (3)
C3—C4—C5—N1−10.0 (3)C25—C20—C17—C18−50.9 (3)
C3—C4—C5—C6169.1 (2)C25—C20—C17—C16129.5 (2)
C3—C4—C7—O316.6 (3)C1—N1—C5—C4−17.3 (3)
C3—C4—C7—O4−161.2 (2)C1—N1—C5—C6163.4 (2)
C3—C14—C19—C18179.7 (2)C1—C2—C10—O1173.1 (2)
C3—C14—C15—C16−178.9 (2)C1—C2—C10—O2−6.4 (4)
C3—C2—C10—O1−8.3 (3)C18—C17—C16—C15−0.8 (3)
C3—C2—C10—O2172.2 (2)C5—N1—C1—C218.3 (4)
C4—C3—C14—C19−163.0 (2)C5—N1—C1—C13−160.6 (2)
C4—C3—C14—C1516.7 (3)C5—C4—C7—O3−171.8 (2)
C4—C3—C2—C1−31.2 (3)C5—C4—C7—O410.5 (3)
C4—C3—C2—C10150.2 (2)C2—C3—C4—C532.1 (3)
C20—C25—C24—C23−1.3 (4)C2—C3—C4—C7−155.7 (2)
C20—C21—C22—C23−0.9 (4)C2—C3—C14—C1974.4 (3)
C20—C17—C16—C15178.8 (2)C2—C3—C14—C15−105.9 (2)
C14—C3—C4—C5−91.1 (3)C7—O4—C8—C9−174.9 (2)
C14—C3—C4—C781.1 (2)C7—C4—C5—N1178.6 (2)
C14—C3—C2—C191.6 (3)C7—C4—C5—C6−2.3 (4)
D—H···AD—HH···AD···AD—H···A
C21—H21···O2i0.952.503.256 (3)137
C6—H6A···O3ii0.982.593.452 (3)147
C19—H19···O10.952.513.227 (3)132
C13—H13B···O20.982.112.857 (3)131
C8—H8A···O2iii0.992.553.344 (3)137
N1—H1···O3ii0.91 (3)2.03 (3)2.938 (3)173 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C21—H21⋯O2i 0.952.503.256 (3)137
C6—H6A⋯O3ii 0.982.593.452 (3)147
C19—H19⋯O10.952.513.227 (3)132
C13—H13B⋯O20.982.112.857 (3)131
C8—H8A⋯O2iii 0.992.553.344 (3)137
N1—H1⋯O3ii 0.91 (3)2.03 (3)2.938 (3)173 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  Br J Cancer       Date:  1989-01       Impact factor: 7.640

7.  Reversal of MDR1-associated resistance to topotecan by PAK-200S, a new dihydropyridine analogue, in human cancer cell lines.

Authors:  U Vanhoefer; M R Müller; R A Hilger; B Lindtner; U Klaassen; N Schleucher; Y M Rustum; S Seeber; A Harstrick
Journal:  Br J Cancer       Date:  1999-12       Impact factor: 7.640

8.  Chemosensitisation of spontaneous multidrug resistance by a 1,4-dihydropyridine analogue and verapamil in human glioma cell lines overexpressing MRP or MDR1.

Authors:  T Abe; K Koike; T Ohga; T Kubo; M Wada; K Kohno; T Mori; K Hidaka; M Kuwano
Journal:  Br J Cancer       Date:  1995-08       Impact factor: 7.640

  8 in total
  1 in total

1.  Dimeric isoxazolyl-1,4-dihydropyridines have enhanced binding at the multi-drug resistance transporter.

Authors:  Scott A Steiger; Chun Li; Donald S Backos; Philip Reigan; N R Natale
Journal:  Bioorg Med Chem       Date:  2017-04-08       Impact factor: 3.641

  1 in total

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