| Literature DB >> 25161573 |
Fozil E Saitkulov1, Azamat A Tashniyazov2, Azimjon A Mamadrahimov3, Kh M Shakhidoyatov4.
Abstract
The non-H atoms of the title mol-ecule, C10H10N2O, are essentially coplanar, with a maximum deviation of 0.046 (4) Å for the O atom. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds, forming chains along [010]. In addtion, weak C-H⋯π inter-actions and π-π stacking inter-actions between benzene and pyrimidine rings, with a centroid-centroid distance of 3.730 (3) Å, link the chains, forming a two-dimensional network parallel to (001).Entities:
Year: 2014 PMID: 25161573 PMCID: PMC4120575 DOI: 10.1107/S1600536814013749
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H10N2O | |
| Melting point: 491(2) K | |
| Orthorhombic, | Cu |
| Hall symbol: P 2ac 2ab | Cell parameters from 333 reflections |
| θ = 3.8–64.0° | |
| µ = 0.71 mm−1 | |
| Needle, colourless | |
| 0.40 × 0.10 × 0.08 mm | |
| Oxford Diffraction Xcalibur Ruby diffractometer | 1585 independent reflections |
| Radiation source: fine-focus sealed tube | 821 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.2576 pixels mm-1 | θmax = 75.9°, θmin = 3.8° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 2236 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1585 reflections | Δρmax = 0.20 e Å−3 |
| 121 parameters | Δρmin = −0.19 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 507 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.3 (12) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N3 | 0.3333 (9) | −0.1245 (5) | 0.17512 (17) | 0.0819 (12) | |
| O1 | 0.4020 (9) | 0.1511 (4) | 0.19869 (17) | 0.1055 (13) | |
| N1 | 0.5799 (9) | −0.2643 (5) | 0.10074 (17) | 0.0846 (11) | |
| C4A | 0.6580 (10) | 0.0357 (6) | 0.1199 (2) | 0.0773 (13) | |
| C4 | 0.4620 (11) | 0.0295 (7) | 0.1667 (2) | 0.0807 (13) | |
| C10 | 0.1309 (12) | −0.1350 (7) | 0.2233 (2) | 0.1009 (17) | |
| H10A | 0.2040 | −0.2059 | 0.2534 | 0.151* | |
| H10B | −0.0397 | −0.1819 | 0.2093 | 0.151* | |
| H10C | 0.0975 | −0.0240 | 0.2386 | 0.151* | |
| C8 | 0.8983 (11) | −0.1088 (7) | 0.0431 (2) | 0.0912 (15) | |
| H8 | 0.9313 | −0.2067 | 0.0219 | 0.109* | |
| C2 | 0.4000 (11) | −0.2650 (6) | 0.1422 (2) | 0.0816 (13) | |
| C8A | 0.7099 (9) | −0.1120 (6) | 0.0883 (2) | 0.0769 (12) | |
| C7 | 1.0368 (13) | 0.0367 (8) | 0.0292 (2) | 0.1023 (16) | |
| H7 | 1.1647 | 0.0374 | −0.0010 | 0.123* | |
| C9 | 0.2541 (14) | −0.4274 (7) | 0.1551 (3) | 0.109 (2) | |
| H9A | 0.2779 | −0.4552 | 0.1954 | 0.164* | |
| H9B | 0.3305 | −0.5158 | 0.1316 | 0.164* | |
| H9C | 0.0603 | −0.4153 | 0.1468 | 0.164* | |
| C6 | 0.9842 (12) | 0.1838 (7) | 0.0607 (3) | 0.1019 (18) | |
| H6 | 1.0776 | 0.2828 | 0.0514 | 0.122* | |
| C5 | 0.7965 (12) | 0.1837 (6) | 0.1051 (2) | 0.0923 (16) | |
| H5 | 0.7615 | 0.2828 | 0.1255 | 0.111* |
| N3 | 0.077 (2) | 0.080 (3) | 0.089 (3) | 0.004 (2) | 0.003 (2) | 0.002 (2) |
| O1 | 0.118 (3) | 0.083 (2) | 0.115 (3) | 0.008 (2) | −0.002 (3) | −0.024 (2) |
| N1 | 0.080 (2) | 0.080 (2) | 0.094 (3) | −0.004 (2) | 0.002 (2) | −0.005 (2) |
| C4A | 0.074 (3) | 0.072 (3) | 0.086 (3) | −0.001 (2) | −0.011 (3) | −0.001 (3) |
| C4 | 0.083 (3) | 0.073 (3) | 0.086 (3) | 0.010 (3) | −0.011 (3) | −0.004 (3) |
| C10 | 0.100 (4) | 0.104 (4) | 0.098 (3) | 0.020 (4) | 0.012 (3) | 0.008 (3) |
| C8 | 0.085 (3) | 0.090 (3) | 0.099 (3) | 0.004 (3) | 0.003 (3) | −0.012 (3) |
| C2 | 0.076 (3) | 0.066 (3) | 0.102 (3) | 0.004 (3) | −0.006 (3) | −0.002 (3) |
| C8A | 0.068 (3) | 0.071 (3) | 0.091 (3) | −0.001 (3) | −0.005 (3) | 0.003 (3) |
| C7 | 0.092 (4) | 0.117 (4) | 0.098 (3) | −0.003 (4) | 0.006 (3) | 0.006 (4) |
| C9 | 0.103 (4) | 0.077 (3) | 0.147 (5) | −0.002 (3) | 0.014 (4) | 0.002 (4) |
| C6 | 0.096 (4) | 0.092 (4) | 0.118 (4) | −0.013 (3) | −0.008 (4) | 0.022 (3) |
| C5 | 0.093 (4) | 0.076 (3) | 0.108 (4) | 0.003 (3) | −0.009 (3) | −0.002 (3) |
| N3—C4 | 1.382 (6) | C8—C7 | 1.370 (7) |
| N3—C2 | 1.385 (6) | C8—C8A | 1.383 (7) |
| N3—C10 | 1.482 (6) | C8—H8 | 0.9300 |
| O1—C4 | 1.248 (6) | C2—C9 | 1.496 (7) |
| N1—C2 | 1.292 (6) | C7—C6 | 1.397 (8) |
| N1—C8A | 1.390 (6) | C7—H7 | 0.9300 |
| C4A—C5 | 1.392 (7) | C9—H9A | 0.9600 |
| C4A—C8A | 1.400 (6) | C9—H9B | 0.9600 |
| C4A—C4 | 1.436 (7) | C9—H9C | 0.9600 |
| C10—H10A | 0.9600 | C6—C5 | 1.368 (7) |
| C10—H10B | 0.9600 | C6—H6 | 0.9300 |
| C10—H10C | 0.9600 | C5—H5 | 0.9300 |
| C4—N3—C2 | 121.8 (4) | N1—C2—C9 | 117.9 (5) |
| C4—N3—C10 | 116.8 (4) | N3—C2—C9 | 118.2 (5) |
| C2—N3—C10 | 121.3 (5) | C8—C8A—N1 | 117.9 (5) |
| C2—N1—C8A | 117.4 (4) | C8—C8A—C4A | 119.6 (5) |
| C5—C4A—C8A | 119.4 (5) | N1—C8A—C4A | 122.4 (4) |
| C5—C4A—C4 | 121.9 (5) | C8—C7—C6 | 119.4 (5) |
| C8A—C4A—C4 | 118.7 (5) | C8—C7—H7 | 120.3 |
| O1—C4—N3 | 119.5 (5) | C6—C7—H7 | 120.3 |
| O1—C4—C4A | 124.9 (5) | C2—C9—H9A | 109.5 |
| N3—C4—C4A | 115.6 (4) | C2—C9—H9B | 109.5 |
| N3—C10—H10A | 109.5 | H9A—C9—H9B | 109.5 |
| N3—C10—H10B | 109.5 | C2—C9—H9C | 109.5 |
| H10A—C10—H10B | 109.5 | H9A—C9—H9C | 109.5 |
| N3—C10—H10C | 109.5 | H9B—C9—H9C | 109.5 |
| H10A—C10—H10C | 109.5 | C5—C6—C7 | 120.7 (5) |
| H10B—C10—H10C | 109.5 | C5—C6—H6 | 119.7 |
| C7—C8—C8A | 120.8 (5) | C7—C6—H6 | 119.7 |
| C7—C8—H8 | 119.6 | C6—C5—C4A | 120.1 (5) |
| C8A—C8—H8 | 119.6 | C6—C5—H5 | 120.0 |
| N1—C2—N3 | 124.0 (5) | C4A—C5—H5 | 120.0 |
| H··· | ||||
| C10—H10 | 0.96 | 2.47 | 3.345 (8) | 151 |
| C10—H10 | 0.96 | 2.80 | 3.608 (6) | 142 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the N1/C2/N3/C4/C4A/C8A ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C10—H10 | 0.96 | 2.47 | 3.345 (8) | 151 |
| C10—H10 | 0.96 | 2.80 | 3.608 (6) | 142 |
Symmetry codes: (i) ; (ii) .