Literature DB >> 25161539

(Z)-3-[(2-Amino-benz-yl)amino]-1-phenyl-but-2-en-1-one.

Vedavalli Sairaj1, Thothadri Srinivasan2, Muthusamy Kandaswamy1, Devadasan Velmurugan2.   

Abstract

In the title compound, C17H18N2O, the aromatic rings are almost normal to one another, making a dihedral angle of 89.00 (8)°. There is an intra-molecular N-H⋯O hydrogen bond in the mol-ecule enclosing an S(6) ring motif. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming chains along [010].

Entities:  

Year:  2014        PMID: 25161539      PMCID: PMC4120556          DOI: 10.1107/S1600536814012070

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of chalcones, see: Di Carlo et al. (1999 ▶); Lin et al. (2002 ▶). For a related structure, see: Ranjith et al. (2010 ▶).

Experimental

Crystal data

C17H18N2O M = 266.33 Monoclinic, a = 11.3197 (4) Å b = 9.8341 (3) Å c = 13.4207 (4) Å β = 106.387 (2)° V = 1433.29 (8) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.698, T max = 0.746 14860 measured reflections 3921 independent reflections 2528 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.156 S = 1.03 3921 reflections 183 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.16 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814012070/su2735sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814012070/su2735Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814012070/su2735Isup3.cml CCDC reference: 1005094 Additional supporting information: crystallographic information; 3D view; checkCIF report
C17H18N2OF(000) = 568
Mr = 266.33Dx = 1.234 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3921 reflections
a = 11.3197 (4) Åθ = 1.9–29.3°
b = 9.8341 (3) ŵ = 0.08 mm1
c = 13.4207 (4) ÅT = 293 K
β = 106.387 (2)°Block, colourless
V = 1433.29 (8) Å30.30 × 0.25 × 0.20 mm
Z = 4
Bruker SMART APEXII area-detector diffractometer3921 independent reflections
Radiation source: fine-focus sealed tube2528 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
ω and φ scansθmax = 29.3°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −15→15
Tmin = 0.698, Tmax = 0.746k = −13→13
14860 measured reflectionsl = −10→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H-atom parameters constrained
wR(F2) = 0.156w = 1/[σ2(Fo2) + (0.0715P)2 + 0.2241P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3921 reflectionsΔρmax = 0.23 e Å3
183 parametersΔρmin = −0.16 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.020 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.37143 (13)0.36601 (14)−0.34891 (10)0.0447 (3)
C20.24361 (15)0.37189 (17)−0.38045 (13)0.0588 (4)
H20.20350.4073−0.44550.071*
C30.17631 (16)0.3268 (2)−0.31782 (17)0.0701 (5)
H30.09080.3311−0.34070.084*
C40.23319 (19)0.27475 (19)−0.22096 (17)0.0724 (5)
H40.18670.2442−0.17830.087*
C50.36069 (17)0.26853 (18)−0.18788 (13)0.0601 (4)
H50.39950.2335−0.12240.072*
C60.43142 (13)0.31337 (15)−0.25025 (10)0.0445 (3)
C70.56975 (14)0.3028 (2)−0.21832 (11)0.0602 (4)
H7A0.59300.2264−0.25450.072*
H7B0.60310.3844−0.24070.072*
C80.66303 (14)0.38414 (16)−0.03882 (11)0.0516 (4)
C90.6376 (2)0.5280 (2)−0.07480 (15)0.0830 (6)
H9A0.68430.5498−0.12220.125*
H9B0.66070.5880−0.01610.125*
H9C0.55130.5384−0.10920.125*
C100.72605 (14)0.35770 (15)0.06411 (11)0.0492 (4)
H100.74880.43130.10900.059*
C110.75754 (13)0.22683 (14)0.10462 (10)0.0438 (3)
C120.83849 (12)0.20920 (14)0.21386 (10)0.0414 (3)
C130.88339 (15)0.08133 (17)0.24592 (12)0.0559 (4)
H130.86320.00860.19990.067*
C140.95824 (18)0.0598 (2)0.34596 (13)0.0714 (5)
H140.9888−0.02670.36630.086*
C150.98725 (17)0.1654 (2)0.41484 (12)0.0709 (5)
H151.03760.15090.48190.085*
C160.94187 (17)0.2926 (2)0.38466 (12)0.0691 (5)
H160.96040.36410.43180.083*
C170.86870 (15)0.31536 (17)0.28458 (11)0.0568 (4)
H170.83950.40250.26450.068*
N10.43740 (14)0.41274 (17)−0.41456 (10)0.0704 (4)
H1A0.39930.4452−0.47450.084*
H1B0.51650.4093−0.39540.084*
N20.62611 (13)0.28532 (14)−0.10721 (9)0.0572 (4)
H2A0.63620.2033−0.08410.069*
O10.72160 (13)0.12117 (11)0.05299 (8)0.0710 (4)
U11U22U33U12U13U23
C10.0496 (8)0.0388 (8)0.0424 (7)0.0033 (6)0.0076 (6)−0.0008 (5)
C20.0501 (9)0.0528 (9)0.0654 (9)0.0066 (7)0.0031 (7)−0.0081 (7)
C30.0493 (9)0.0607 (11)0.0986 (14)−0.0023 (8)0.0179 (9)−0.0194 (10)
C40.0741 (12)0.0607 (11)0.0985 (14)−0.0168 (9)0.0506 (11)−0.0133 (10)
C50.0728 (11)0.0578 (10)0.0551 (8)−0.0043 (8)0.0270 (8)0.0019 (7)
C60.0493 (8)0.0446 (8)0.0381 (6)0.0003 (6)0.0101 (5)0.0000 (6)
C70.0511 (8)0.0879 (13)0.0373 (7)0.0072 (8)0.0052 (6)0.0062 (7)
C80.0517 (8)0.0490 (9)0.0492 (7)0.0033 (7)0.0065 (6)0.0074 (6)
C90.1066 (16)0.0575 (12)0.0705 (11)0.0052 (11)0.0013 (11)0.0193 (9)
C100.0554 (8)0.0400 (8)0.0446 (7)−0.0008 (6)0.0016 (6)0.0002 (6)
C110.0445 (7)0.0414 (8)0.0402 (6)−0.0044 (6)0.0032 (5)−0.0026 (5)
C120.0389 (7)0.0425 (8)0.0401 (6)−0.0038 (5)0.0069 (5)0.0023 (5)
C130.0635 (10)0.0474 (9)0.0527 (8)0.0000 (7)0.0094 (7)0.0081 (7)
C140.0772 (12)0.0672 (12)0.0623 (10)0.0094 (9)0.0074 (9)0.0260 (9)
C150.0655 (11)0.0922 (14)0.0453 (8)−0.0024 (10)0.0001 (7)0.0165 (9)
C160.0724 (11)0.0783 (13)0.0455 (8)−0.0077 (10)−0.0015 (8)−0.0074 (8)
C170.0621 (9)0.0502 (9)0.0482 (8)−0.0006 (7)−0.0008 (7)−0.0032 (7)
N10.0644 (9)0.0951 (12)0.0499 (7)0.0127 (8)0.0134 (6)0.0302 (7)
N20.0638 (8)0.0585 (8)0.0395 (6)0.0052 (6)−0.0012 (6)0.0044 (5)
O10.0959 (9)0.0427 (7)0.0538 (6)−0.0044 (6)−0.0122 (6)−0.0065 (5)
C1—N11.384 (2)C9—H9C0.9600
C1—C21.389 (2)C10—C111.403 (2)
C1—C61.4053 (18)C10—H100.9300
C2—C31.358 (3)C11—O11.2516 (16)
C2—H20.9300C11—C121.5036 (17)
C3—C41.376 (3)C12—C131.379 (2)
C3—H30.9300C12—C171.387 (2)
C4—C51.386 (3)C13—C141.387 (2)
C4—H40.9300C13—H130.9300
C5—C61.384 (2)C14—C151.367 (3)
C5—H50.9300C14—H140.9300
C6—C71.506 (2)C15—C161.369 (3)
C7—N21.4571 (17)C15—H150.9300
C7—H7A0.9700C16—C171.383 (2)
C7—H7B0.9700C16—H160.9300
C8—N21.3210 (19)C17—H170.9300
C8—C101.3888 (19)N1—H1A0.8600
C8—C91.496 (2)N1—H1B0.8600
C9—H9A0.9600N2—H2A0.8600
C9—H9B0.9600
N1—C1—C2119.65 (13)H9B—C9—H9C109.5
N1—C1—C6121.19 (13)C8—C10—C11124.07 (13)
C2—C1—C6119.16 (14)C8—C10—H10118.0
C3—C2—C1121.04 (16)C11—C10—H10118.0
C3—C2—H2119.5O1—C11—C10122.65 (12)
C1—C2—H2119.5O1—C11—C12117.23 (12)
C2—C3—C4120.75 (16)C10—C11—C12120.12 (12)
C2—C3—H3119.6C13—C12—C17118.34 (13)
C4—C3—H3119.6C13—C12—C11118.62 (13)
C3—C4—C5119.09 (16)C17—C12—C11123.03 (13)
C3—C4—H4120.5C12—C13—C14120.79 (16)
C5—C4—H4120.5C12—C13—H13119.6
C6—C5—C4121.33 (16)C14—C13—H13119.6
C6—C5—H5119.3C15—C14—C13120.23 (17)
C4—C5—H5119.3C15—C14—H14119.9
C5—C6—C1118.63 (14)C13—C14—H14119.9
C5—C6—C7122.58 (13)C14—C15—C16119.68 (15)
C1—C6—C7118.75 (12)C14—C15—H15120.2
N2—C7—C6114.79 (13)C16—C15—H15120.2
N2—C7—H7A108.6C15—C16—C17120.48 (16)
C6—C7—H7A108.6C15—C16—H16119.8
N2—C7—H7B108.6C17—C16—H16119.8
C6—C7—H7B108.6C16—C17—C12120.47 (16)
H7A—C7—H7B107.5C16—C17—H17119.8
N2—C8—C10121.76 (14)C12—C17—H17119.8
N2—C8—C9118.48 (13)C1—N1—H1A120.0
C10—C8—C9119.75 (15)C1—N1—H1B120.0
C8—C9—H9A109.5H1A—N1—H1B120.0
C8—C9—H9B109.5C8—N2—C7125.86 (14)
H9A—C9—H9B109.5C8—N2—H2A117.1
C8—C9—H9C109.5C7—N2—H2A117.1
H9A—C9—H9C109.5
N1—C1—C2—C3179.97 (16)C8—C10—C11—C12172.88 (14)
C6—C1—C2—C3−0.5 (2)O1—C11—C12—C139.5 (2)
C1—C2—C3—C40.4 (3)C10—C11—C12—C13−170.01 (14)
C2—C3—C4—C5−0.2 (3)O1—C11—C12—C17−169.53 (15)
C3—C4—C5—C60.0 (3)C10—C11—C12—C1711.0 (2)
C4—C5—C6—C10.0 (2)C17—C12—C13—C14−0.9 (2)
C4—C5—C6—C7−177.47 (16)C11—C12—C13—C14−179.89 (15)
N1—C1—C6—C5179.81 (15)C12—C13—C14—C150.9 (3)
C2—C1—C6—C50.3 (2)C13—C14—C15—C160.1 (3)
N1—C1—C6—C7−2.6 (2)C14—C15—C16—C17−1.1 (3)
C2—C1—C6—C7177.83 (14)C15—C16—C17—C121.1 (3)
C5—C6—C7—N2−19.4 (2)C13—C12—C17—C16−0.1 (2)
C1—C6—C7—N2163.10 (14)C11—C12—C17—C16178.86 (15)
N2—C8—C10—C110.8 (3)C10—C8—N2—C7−174.01 (15)
C9—C8—C10—C11−178.05 (17)C9—C8—N2—C74.9 (3)
C8—C10—C11—O1−6.6 (3)C6—C7—N2—C8−90.1 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O10.861.992.6619 (17)134
N1—H1A···O1i0.862.273.0009 (19)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2A⋯O10.861.992.6619 (17)134
N1—H1A⋯O1i 0.862.273.0009 (19)143

Symmetry code: (i) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Flavonoids: old and new aspects of a class of natural therapeutic drugs.

Authors:  G Di Carlo; N Mascolo; A A Izzo; F Capasso
Journal:  Life Sci       Date:  1999       Impact factor: 5.037

3.  Chalcones and flavonoids as anti-tuberculosis agents.

Authors:  Yuh-Meei Lin; Yasheen Zhou; Michael T Flavin; Li-Ming Zhou; Weiguo Nie; Fa-Ching Chen
Journal:  Bioorg Med Chem       Date:  2002-08       Impact factor: 3.641

4.  (E)-1-[4-(Prop-2-yn-1-yl-oxy)phen-yl]-3-(3,4,5-trimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  S Ranjith; A Thirunarayanan; S Raja; P Rajakumar; A Subbiahpandi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.