Literature DB >> 25161532

Bis{N-[2-hy-droxy-1,1-bis-(hy-droxy-methyl)eth-yl]glycinato-κ(3) O,N,O'}iron(II).

Ning Jiang1, Juan-Juan Hou1.   

Abstract

In the title compound, [Fe(C6H12NO5)2], the Fe(II) ion lies on an inversion center and is coordinated by two N atoms and four O atoms from two tridentate N-[2-hy-droxy-1,1-bis-(hy-droxy-methyl)eth-yl]glycine ligands, forming a slightly distorted octa-hedral coordination environment. In the crystal, O-H⋯O, O-H⋯N and weak C-H⋯O hydrogen bonds link mol-ecules, forming a three-dimensional network.

Entities:  

Keywords:  crystal structure

Year:  2014        PMID: 25161532      PMCID: PMC4120612          DOI: 10.1107/S160053681401397X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the applications of tripodal alcohols as single-mol­ecule magnets, see: Pilawa et al. (1998 ▶); Brechin (2005 ▶); Murugesu et al. (2005 ▶).

Experimental

Crystal data

[Fe(C6H12NO5)2] M = 412.18 Monoclinic, a = 8.8198 (7) Å b = 9.0245 (7) Å c = 12.3533 (7) Å β = 127.224 (4)° V = 782.94 (10) Å3 Z = 2 Mo Kα radiation μ = 1.02 mm−1 T = 298 K 0.19 × 0.16 × 0.08 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.829, T max = 0.923 4000 measured reflections 1708 independent reflections 1230 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.099 S = 1.04 1708 reflections 131 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.46 e Å−3 Δρmin = −0.39 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT-Plus (Bruker, 2007 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2006 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S160053681401397X/lh5715sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681401397X/lh5715Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S160053681401397X/lh5715Isup3.cdx Additional supporting information: crystallographic information; 3D view; checkCIF report
[Fe(C6H12NO5)2]F(000) = 432
Mr = 412.18Dx = 1.748 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 621 reflections
a = 8.8198 (7) Åθ = 2.9–21.9°
b = 9.0245 (7) ŵ = 1.02 mm1
c = 12.3533 (7) ÅT = 298 K
β = 127.224 (4)°Sheet, colorless
V = 782.94 (10) Å30.19 × 0.16 × 0.08 mm
Z = 2
Bruker SMART CCD diffractometer1708 independent reflections
Radiation source: fine-focus sealed tube1230 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.056
multi–scanθmax = 27.0°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −11→11
Tmin = 0.829, Tmax = 0.923k = −11→11
4000 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.034P)2] where P = (Fo2 + 2Fc2)/3
1708 reflections(Δ/σ)max < 0.001
131 parametersΔρmax = 0.46 e Å3
4 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Fe10.50000.50000.50000.01527 (19)
O1−0.0265 (4)0.7341 (3)0.0516 (3)0.0347 (7)
O20.0173 (4)0.8369 (3)0.3530 (3)0.0355 (7)
O30.4719 (4)0.7180 (3)0.5354 (3)0.0323 (7)
O40.6437 (4)0.6393 (3)0.2600 (3)0.0356 (7)
O50.6619 (3)0.5743 (3)0.4408 (2)0.0283 (6)
N10.2766 (4)0.5686 (3)0.2962 (3)0.0209 (6)
C10.2121 (5)0.7215 (4)0.2983 (3)0.0190 (8)
C20.3608 (5)0.5508 (4)0.2233 (3)0.0237 (8)
H2A0.29270.61320.14300.028*
H2B0.34660.44880.19400.028*
C30.5700 (5)0.5920 (4)0.3128 (4)0.0243 (8)
C40.1289 (5)0.8101 (4)0.1682 (4)0.0276 (9)
H4A0.08550.90560.17580.033*
H4B0.22740.82760.15720.033*
C50.0626 (5)0.6982 (4)0.3222 (4)0.0269 (8)
H5A−0.05160.65560.24160.032*
H5B0.11120.62980.39710.032*
C60.3822 (5)0.8077 (4)0.4165 (4)0.0269 (8)
H6A0.47120.83020.39730.032*
H6B0.33960.90030.42990.032*
H1A0.182 (4)0.506 (3)0.259 (3)0.027 (10)*
H3A0.514 (6)0.773 (5)0.605 (3)0.078 (18)*
H1B−0.126 (5)0.787 (5)0.014 (5)0.10 (2)*
H2C0.019 (7)0.815 (5)0.421 (4)0.080 (19)*
U11U22U33U12U13U23
Fe10.0159 (4)0.0181 (3)0.0101 (4)0.0003 (3)0.0069 (3)0.0009 (3)
O10.0265 (16)0.0462 (18)0.0188 (15)0.0048 (14)0.0070 (14)0.0003 (13)
O20.0443 (18)0.0349 (16)0.0402 (19)0.0148 (13)0.0323 (16)0.0086 (14)
O30.0379 (17)0.0292 (15)0.0160 (15)0.0004 (13)0.0091 (14)−0.0017 (12)
O40.0293 (15)0.0513 (18)0.0283 (16)0.0014 (13)0.0185 (14)0.0135 (13)
O50.0234 (14)0.0396 (15)0.0174 (14)0.0003 (12)0.0100 (12)0.0048 (12)
N10.0203 (16)0.0195 (16)0.0220 (17)−0.0026 (13)0.0123 (15)−0.0040 (13)
C10.0192 (18)0.0201 (18)0.0148 (19)0.0020 (14)0.0087 (16)0.0019 (14)
C20.0213 (19)0.0286 (19)0.018 (2)0.0028 (15)0.0103 (17)−0.0004 (15)
C30.026 (2)0.0218 (19)0.024 (2)0.0015 (16)0.0141 (18)0.0035 (16)
C40.027 (2)0.029 (2)0.022 (2)0.0025 (17)0.0123 (19)0.0029 (17)
C50.027 (2)0.031 (2)0.025 (2)0.0050 (17)0.0166 (19)0.0038 (17)
C60.025 (2)0.027 (2)0.023 (2)−0.0003 (16)0.0121 (18)−0.0005 (17)
Fe1—O3i2.062 (3)N1—C11.498 (4)
Fe1—O32.062 (3)N1—H1A0.871 (18)
Fe1—O5i2.071 (2)C1—C41.527 (4)
Fe1—O52.071 (2)C1—C61.529 (5)
Fe1—N12.145 (3)C1—C51.531 (4)
Fe1—N1i2.145 (3)C2—C31.515 (5)
O1—C41.427 (4)C2—H2A0.9700
O1—H1B0.850 (19)C2—H2B0.9700
O2—C51.433 (4)C4—H4A0.9700
O2—H2C0.854 (19)C4—H4B0.9700
O3—C61.426 (4)C5—H5A0.9700
O3—H3A0.855 (19)C5—H5B0.9700
O4—C31.242 (4)C6—H6A0.9700
O5—C31.277 (4)C6—H6B0.9700
N1—C21.482 (4)
O3i—Fe1—O3180.000 (1)N1—C1—C5104.9 (3)
O3i—Fe1—O5i87.88 (10)C4—C1—C5110.7 (3)
O3—Fe1—O5i92.12 (10)C6—C1—C5110.3 (3)
O3i—Fe1—O592.12 (10)N1—C2—C3111.5 (3)
O3—Fe1—O587.88 (10)N1—C2—H2A109.3
O5i—Fe1—O5180.0C3—C2—H2A109.3
O3i—Fe1—N199.75 (10)N1—C2—H2B109.3
O3—Fe1—N180.25 (10)C3—C2—H2B109.3
O5i—Fe1—N199.68 (10)H2A—C2—H2B108.0
O5—Fe1—N180.32 (10)O4—C3—O5123.4 (3)
O3i—Fe1—N1i80.25 (10)O4—C3—C2119.6 (3)
O3—Fe1—N1i99.75 (10)O5—C3—C2117.0 (3)
O5i—Fe1—N1i80.32 (10)O1—C4—C1111.5 (3)
O5—Fe1—N1i99.68 (10)O1—C4—H4A109.3
N1—Fe1—N1i180.000 (1)C1—C4—H4A109.3
C4—O1—H1B109 (4)O1—C4—H4B109.3
C5—O2—H2C102 (3)C1—C4—H4B109.3
C6—O3—Fe1112.7 (2)H4A—C4—H4B108.0
C6—O3—H3A109 (3)O2—C5—C1110.0 (3)
Fe1—O3—H3A137 (3)O2—C5—H5A109.7
C3—O5—Fe1114.9 (2)C1—C5—H5A109.7
C2—N1—C1116.4 (3)O2—C5—H5B109.7
C2—N1—Fe1103.9 (2)C1—C5—H5B109.7
C1—N1—Fe1109.5 (2)H5A—C5—H5B108.2
C2—N1—H1A106 (2)O3—C6—C1107.9 (3)
C1—N1—H1A111 (2)O3—C6—H6A110.1
Fe1—N1—H1A110 (2)C1—C6—H6A110.1
N1—C1—C4114.2 (3)O3—C6—H6B110.1
N1—C1—C6108.8 (3)C1—C6—H6B110.1
C4—C1—C6107.9 (3)H6A—C6—H6B108.4
O5i—Fe1—O3—C6−120.1 (2)Fe1—N1—C1—C632.2 (3)
O5—Fe1—O3—C659.9 (2)C2—N1—C1—C5156.7 (3)
N1—Fe1—O3—C6−20.6 (2)Fe1—N1—C1—C5−85.9 (3)
N1i—Fe1—O3—C6159.4 (2)C1—N1—C2—C383.5 (4)
O3i—Fe1—O5—C384.2 (2)Fe1—N1—C2—C3−37.0 (3)
O3—Fe1—O5—C3−95.8 (2)Fe1—O5—C3—O4178.2 (3)
N1—Fe1—O5—C3−15.3 (2)Fe1—O5—C3—C2−2.4 (4)
N1i—Fe1—O5—C3164.7 (2)N1—C2—C3—O4−152.0 (3)
O3i—Fe1—N1—C2−62.5 (2)N1—C2—C3—O528.6 (4)
O3—Fe1—N1—C2117.5 (2)N1—C1—C4—O156.5 (4)
O5i—Fe1—N1—C2−152.0 (2)C6—C1—C4—O1177.6 (3)
O5—Fe1—N1—C228.0 (2)C5—C1—C4—O1−61.6 (4)
O3i—Fe1—N1—C1172.4 (2)N1—C1—C5—O2168.6 (3)
O3—Fe1—N1—C1−7.6 (2)C4—C1—C5—O2−67.7 (4)
O5i—Fe1—N1—C182.9 (2)C6—C1—C5—O251.6 (4)
O5—Fe1—N1—C1−97.1 (2)Fe1—O3—C6—C143.9 (3)
C2—N1—C1—C435.4 (4)N1—C1—C6—O3−49.6 (3)
Fe1—N1—C1—C4152.8 (2)C4—C1—C6—O3−174.0 (3)
C2—N1—C1—C6−85.3 (3)C5—C1—C6—O365.0 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2ii0.87 (2)2.10 (2)2.952 (4)166 (3)
O3—H3A···O4iii0.86 (2)1.72 (2)2.562 (4)167 (5)
O1—H1B···O5iv0.85 (2)1.96 (2)2.804 (4)174 (6)
O1—H1B···O4iv0.85 (2)2.59 (5)3.172 (4)127 (4)
O2—H2C···O1iii0.85 (2)1.93 (2)2.779 (4)170 (5)
C5—H5B···O5i0.972.563.452 (4)153
C2—H2A···O10.972.563.184 (4)122
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O2i 0.87 (2)2.10 (2)2.952 (4)166 (3)
O3—H3A⋯O4ii 0.86 (2)1.72 (2)2.562 (4)167 (5)
O1—H1B⋯O5iii 0.85 (2)1.96 (2)2.804 (4)174 (6)
O1—H1B⋯O4iii 0.85 (2)2.59 (5)3.172 (4)127 (4)
O2—H2C⋯O1ii 0.85 (2)1.93 (2)2.779 (4)170 (5)
C5—H5B⋯O5iv 0.972.563.452 (4)153
C2—H2A⋯O10.972.563.184 (4)122

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  New structural motifs in manganese single-molecule magnetism from the use of triethanolamine ligands.

Authors:  Muralee Murugesu; Wolfgang Wernsdorfer; Khalil A Abboud; George Christou
Journal:  Angew Chem Int Ed Engl       Date:  2005-01-28       Impact factor: 15.336

2.  Using tripodal alcohols to build high-spin molecules and single-molecule magnets.

Authors:  Euan K Brechin
Journal:  Chem Commun (Camb)       Date:  2005-09-27       Impact factor: 6.222

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total

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