Literature DB >> 25161527

Poly[tris-(μ-4,4'-bi-pyridine-κ(2) N:N')bis(dimethyl sulfoxide-κO)tetra-kis-(thiocyanato-κN)dicobalt(II)].

Surasak Kaenket1, Pongthipun Phuengphai2, Chaveng Pakawatchai3, Sujittra Youngme1.   

Abstract

The asymmetric unit of the title compound, [Co2(NCS)4(C10n class="Species">H8N2)3(C2H6OS)2] n , consists of one Co(II) atom, two thio-cyanate anions, one dimethyl sulfoxide mol-ecule and one and a half 4,4'-bi-pyridine mol-ecules. The half-molecule is completed by inversion symmetry. The Co(II) atom is coordin-ated in a distorted octa-hedral geometry by two N atoms from two thio-cyanate anions, one O atom from dimethyl sulfoxide as a terminal ligand and three N atoms from three 4,4'-bi-pyridine mol-ecules as bridging ligands linking the cations, with a Co⋯Co separation of 11.5964 (5) Å. This generates a two-dimensional structure parallel to (-103). A C-H⋯S hydrogen bond links the layers into a three-dimensional supra-molecular framework. The layers are stacked in an ABC fashion preventing the occurrence of inter-layer void space and hence leading to the absence of lattice solvent and/or organic guest mol-ecules in the structure.

Entities:  

Year:  2014        PMID: 25161527      PMCID: PMC4120565          DOI: 10.1107/S1600536814013555

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related coordination polymers with ligands such as n class="Chemical">pyrazine, pyrimidine, 4,4′-bi­pyridine and SCN−, see: Wriedt & Näther (2009 ▶, 2010 ▶); Wriedt et al. (2009 ▶); Yao & Wang (2009 ▶).

Experimental

Crystal data

[Co2(NCS)4(C10n class="Species">H8N2)3(C2H6OS)2] M = 974.98 Monoclinic, a = 11.0772 (3) Å b = 16.9999 (2) Å c = 11.6843 (3) Å β = 103.628 (1)° V = 2138.34 (8) Å3 Z = 2 Mo Kα radiation μ = 1.12 mm−1 T = 273 K 0.40 × 0.16 × 0.10 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.591, T max = 0.894 14262 measured reflections 5584 independent reflections 3936 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.109 S = 1.01 5584 reflections 264 parameters H-atom parameters constrained Δρmax = 1.02 e Å−3 Δρmin = −0.58 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814013555/is5365sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814013555/is5365Isup2.hkl CCDC reference: 1007744 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Co2(NCS)4(C10H8N2)3(C2H6OS)2]Z = 2
Mr = 974.98F(000) = 1000
Monoclinic, P21/nDx = 1.514 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 11.0772 (3) ŵ = 1.12 mm1
b = 16.9999 (2) ÅT = 273 K
c = 11.6843 (3) ÅBlock, pink
β = 103.628 (1)°0.40 × 0.16 × 0.10 mm
V = 2138.34 (8) Å3
Bruker SMART APEX CCD diffractometer5584 independent reflections
Radiation source: fine-focus sealed tube3936 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
phi and ω scansθmax = 29.8°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −14→14
Tmin = 0.591, Tmax = 0.894k = −16→22
14262 measured reflectionsl = −12→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.109H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0522P)2 + 1.1491P] where P = (Fo2 + 2Fc2)/3
5584 reflections(Δ/σ)max < 0.001
264 parametersΔρmax = 1.02 e Å3
0 restraintsΔρmin = −0.58 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.61610 (3)0.238576 (18)0.34507 (3)0.02619 (10)
S30.74846 (7)0.21001 (5)0.14197 (7)0.04276 (18)
S20.57089 (8)0.31500 (5)0.72918 (8)0.0535 (2)
S10.93773 (9)0.42788 (7)0.32672 (16)0.1102 (6)
N30.47394 (17)0.14430 (11)0.30393 (18)0.0268 (4)
N20.47009 (19)0.33263 (12)0.30583 (19)0.0309 (5)
N10.76429 (18)0.14581 (12)0.39797 (18)0.0303 (4)
O10.62030 (17)0.22923 (12)0.16482 (17)0.0396 (4)
N70.6038 (2)0.25004 (14)0.5192 (2)0.0394 (5)
C150.4133 (2)0.12562 (14)0.1932 (2)0.0297 (5)
H150.43150.15410.13140.036*
N60.7569 (2)0.32360 (14)0.3613 (2)0.0435 (6)
C80.2944 (2)0.45622 (14)0.2665 (2)0.0299 (5)
C30.9512 (2)0.03082 (14)0.4782 (2)0.0279 (5)
C160.5904 (2)0.27781 (15)0.6063 (2)0.0324 (6)
C50.8725 (2)0.16319 (15)0.4734 (2)0.0366 (6)
H50.88560.21490.49920.044*
C90.2624 (2)0.38055 (16)0.2287 (3)0.0404 (7)
H90.18130.36920.18880.048*
C20.8399 (2)0.01292 (15)0.3977 (3)0.0398 (7)
H20.8257−0.03790.36810.048*
C110.4472 (2)0.10091 (15)0.3912 (2)0.0321 (5)
H110.48740.11280.46850.039*
C100.3514 (2)0.32131 (15)0.2502 (3)0.0395 (6)
H100.32680.27080.22420.047*
C40.9657 (2)0.10903 (15)0.5153 (2)0.0376 (6)
H41.03820.12480.56820.045*
C10.7503 (2)0.07089 (15)0.3616 (3)0.0373 (6)
H10.67650.05680.30920.045*
C60.5003 (3)0.40610 (16)0.3448 (3)0.0447 (7)
H60.58170.41570.38550.054*
C170.8323 (3)0.36663 (17)0.3468 (3)0.0437 (7)
C140.3251 (2)0.06625 (15)0.1664 (2)0.0319 (5)
H140.28420.05670.08860.038*
C70.4169 (3)0.46839 (16)0.3280 (3)0.0469 (8)
H70.44270.51800.35760.056*
C190.7763 (4)0.2828 (3)0.0436 (4)0.0746 (12)
H19A0.70510.2873−0.02140.112*
H19B0.84760.26840.01480.112*
H19C0.79140.33240.08380.112*
C180.7228 (5)0.1284 (3)0.0458 (5)0.0992 (17)
H18A0.69430.08460.08420.149*
H18B0.79890.11460.02500.149*
H18C0.66110.1416−0.02410.149*
C120.3626 (2)0.03931 (15)0.3716 (2)0.0344 (6)
H120.34870.01020.43470.041*
C130.2983 (2)0.02117 (14)0.2567 (2)0.0298 (5)
U11U22U33U12U13U23
Co10.02248 (16)0.02112 (16)0.03429 (18)0.00099 (12)0.00529 (12)0.00138 (13)
S30.0366 (4)0.0522 (4)0.0425 (4)0.0033 (3)0.0155 (3)0.0038 (3)
S20.0528 (5)0.0601 (5)0.0505 (5)−0.0048 (4)0.0179 (4)−0.0164 (4)
S10.0445 (5)0.0713 (7)0.1993 (16)−0.0200 (5)−0.0023 (7)0.0688 (9)
N30.0229 (9)0.0205 (10)0.0362 (11)0.0000 (7)0.0053 (8)0.0014 (8)
N20.0276 (10)0.0266 (11)0.0374 (12)0.0033 (8)0.0055 (9)−0.0002 (9)
N10.0289 (10)0.0263 (10)0.0344 (11)0.0059 (8)0.0049 (8)0.0017 (9)
O10.0297 (9)0.0504 (12)0.0399 (10)−0.0013 (8)0.0105 (8)0.0048 (9)
N70.0391 (12)0.0393 (13)0.0380 (12)0.0040 (10)0.0054 (10)0.0015 (10)
C150.0293 (12)0.0246 (12)0.0353 (13)−0.0024 (9)0.0075 (10)0.0040 (10)
N60.0340 (12)0.0319 (12)0.0631 (16)−0.0024 (10)0.0083 (11)−0.0004 (11)
C80.0277 (12)0.0257 (12)0.0364 (13)0.0050 (9)0.0079 (10)0.0004 (10)
C30.0249 (11)0.0260 (12)0.0325 (12)0.0051 (9)0.0061 (9)0.0009 (10)
C160.0292 (12)0.0264 (13)0.0394 (14)−0.0001 (9)0.0035 (10)0.0015 (10)
C50.0342 (13)0.0252 (12)0.0450 (15)0.0050 (10)−0.0017 (11)−0.0053 (11)
C90.0274 (13)0.0291 (13)0.0589 (18)0.0036 (10)−0.0012 (12)−0.0063 (12)
C20.0325 (13)0.0233 (12)0.0560 (17)0.0040 (10)−0.0048 (12)−0.0074 (12)
C110.0326 (13)0.0286 (13)0.0339 (13)−0.0028 (10)0.0053 (10)0.0004 (10)
C100.0334 (13)0.0227 (12)0.0579 (18)0.0029 (10)0.0018 (12)−0.0071 (12)
C40.0316 (13)0.0296 (14)0.0452 (15)0.0038 (10)−0.0037 (11)−0.0054 (11)
C10.0263 (12)0.0303 (13)0.0491 (16)0.0044 (10)−0.0032 (11)−0.0042 (12)
C60.0273 (13)0.0306 (14)0.069 (2)0.0041 (10)−0.0027 (13)−0.0075 (13)
C170.0301 (13)0.0312 (14)0.0650 (19)0.0001 (11)0.0015 (13)0.0108 (13)
C140.0309 (12)0.0299 (13)0.0326 (13)−0.0054 (10)0.0029 (10)0.0001 (10)
C70.0348 (14)0.0253 (13)0.073 (2)0.0028 (11)−0.0029 (14)−0.0119 (13)
C190.063 (2)0.088 (3)0.086 (3)0.014 (2)0.044 (2)0.039 (2)
C180.111 (4)0.095 (4)0.109 (4)−0.019 (3)0.059 (3)−0.054 (3)
C120.0374 (14)0.0312 (13)0.0352 (14)−0.0073 (11)0.0097 (11)0.0056 (11)
C130.0259 (12)0.0223 (12)0.0411 (14)−0.0025 (9)0.0076 (10)0.0002 (10)
Co1—N72.080 (2)C3—C3ii1.506 (4)
Co1—N62.102 (2)C5—C41.384 (3)
Co1—O12.1234 (19)C5—H50.9300
Co1—N32.2187 (19)C9—C101.390 (4)
Co1—N22.244 (2)C9—H90.9300
Co1—N12.2551 (19)C2—C11.392 (3)
S3—O11.5401 (19)C2—H20.9300
S3—C191.765 (4)C11—C121.388 (3)
S3—C181.766 (4)C11—H110.9300
S2—C161.629 (3)C10—H100.9300
S1—C171.623 (3)C4—H40.9300
N3—C111.347 (3)C1—H10.9300
N3—C151.348 (3)C6—C71.388 (4)
N2—C101.336 (3)C6—H60.9300
N2—C61.344 (3)C14—C131.391 (4)
N1—C11.340 (3)C14—H140.9300
N1—C51.343 (3)C7—H70.9300
N7—C161.163 (4)C19—H19A0.9600
C15—C141.388 (3)C19—H19B0.9600
C15—H150.9300C19—H19C0.9600
N6—C171.152 (4)C18—H18A0.9600
C8—C91.379 (4)C18—H18B0.9600
C8—C71.393 (4)C18—H18C0.9600
C8—C13i1.489 (3)C12—C131.398 (4)
C3—C41.396 (3)C12—H120.9300
C3—C21.396 (3)C13—C8iii1.489 (3)
N7—Co1—N693.76 (10)C10—C9—H9120.0
N7—Co1—O1177.34 (8)C1—C2—C3120.2 (2)
N6—Co1—O187.22 (9)C1—C2—H2119.9
N7—Co1—N394.19 (9)C3—C2—H2119.9
N6—Co1—N3171.85 (9)N3—C11—C12123.3 (2)
O1—Co1—N384.91 (7)N3—C11—H11118.4
N7—Co1—N285.58 (8)C12—C11—H11118.4
N6—Co1—N290.69 (8)N2—C10—C9123.9 (2)
O1—Co1—N291.94 (8)N2—C10—H10118.0
N3—Co1—N291.71 (7)C9—C10—H10118.0
N7—Co1—N190.49 (8)C5—C4—C3120.1 (2)
N6—Co1—N188.83 (8)C5—C4—H4119.9
O1—Co1—N192.00 (8)C3—C4—H4119.9
N3—Co1—N189.30 (7)N1—C1—C2123.8 (2)
N2—Co1—N1176.00 (8)N1—C1—H1118.1
O1—S3—C19105.89 (15)C2—C1—H1118.1
O1—S3—C18105.07 (18)N2—C6—C7123.8 (2)
C19—S3—C1899.4 (3)N2—C6—H6118.1
C11—N3—C15116.7 (2)C7—C6—H6118.1
C11—N3—Co1120.20 (16)N6—C17—S1179.5 (3)
C15—N3—Co1123.09 (16)C15—C14—C13119.6 (2)
C10—N2—C6115.9 (2)C15—C14—H14120.2
C10—N2—Co1125.18 (17)C13—C14—H14120.2
C6—N2—Co1118.89 (17)C6—C7—C8119.6 (2)
C1—N1—C5115.8 (2)C6—C7—H7120.2
C1—N1—Co1123.75 (16)C8—C7—H7120.2
C5—N1—Co1120.37 (16)S3—C19—H19A109.5
S3—O1—Co1115.11 (11)S3—C19—H19B109.5
C16—N7—Co1161.0 (2)H19A—C19—H19B109.5
N3—C15—C14123.6 (2)S3—C19—H19C109.5
N3—C15—H15118.2H19A—C19—H19C109.5
C14—C15—H15118.2H19B—C19—H19C109.5
C17—N6—Co1166.3 (3)S3—C18—H18A109.5
C9—C8—C7116.7 (2)S3—C18—H18B109.5
C9—C8—C13i121.3 (2)H18A—C18—H18B109.5
C7—C8—C13i122.0 (2)S3—C18—H18C109.5
C4—C3—C2115.8 (2)H18A—C18—H18C109.5
C4—C3—C3ii122.5 (3)H18B—C18—H18C109.5
C2—C3—C3ii121.7 (3)C11—C12—C13119.8 (2)
N7—C16—S2178.9 (3)C11—C12—H12120.1
N1—C5—C4124.2 (2)C13—C12—H12120.1
N1—C5—H5117.9C14—C13—C12117.1 (2)
C4—C5—H5117.9C14—C13—C8iii122.2 (2)
C8—C9—C10120.0 (2)C12—C13—C8iii120.8 (2)
C8—C9—H9120.0
N7—Co1—N3—C11−21.36 (19)N3—Co1—N7—C16−124.4 (7)
N6—Co1—N3—C11145.8 (5)N2—Co1—N7—C16−33.0 (7)
O1—Co1—N3—C11161.15 (19)N1—Co1—N7—C16146.2 (7)
N2—Co1—N3—C11−107.05 (18)C11—N3—C15—C141.3 (4)
N1—Co1—N3—C1169.08 (18)Co1—N3—C15—C14179.32 (19)
N7—Co1—N3—C15160.68 (19)N7—Co1—N6—C17180.0 (10)
N6—Co1—N3—C15−32.1 (7)O1—Co1—N6—C17−2.5 (10)
O1—Co1—N3—C15−16.81 (19)N3—Co1—N6—C1712.8 (14)
N2—Co1—N3—C1574.99 (19)N2—Co1—N6—C17−94.4 (10)
N1—Co1—N3—C15−108.88 (19)N1—Co1—N6—C1789.5 (10)
N7—Co1—N2—C10−107.9 (2)C1—N1—C5—C4−1.1 (4)
N6—Co1—N2—C10158.4 (2)Co1—N1—C5—C4176.5 (2)
O1—Co1—N2—C1071.1 (2)C7—C8—C9—C10−1.5 (4)
N3—Co1—N2—C10−13.8 (2)C13i—C8—C9—C10179.1 (3)
N1—Co1—N2—C10−118.5 (11)C4—C3—C2—C1−1.7 (4)
N7—Co1—N2—C669.0 (2)C3ii—C3—C2—C1178.4 (3)
N6—Co1—N2—C6−24.8 (2)C15—N3—C11—C120.4 (4)
O1—Co1—N2—C6−112.0 (2)Co1—N3—C11—C12−177.7 (2)
N3—Co1—N2—C6163.0 (2)C6—N2—C10—C92.0 (4)
N1—Co1—N2—C658.4 (12)Co1—N2—C10—C9178.9 (2)
N7—Co1—N1—C1116.1 (2)C8—C9—C10—N2−0.6 (5)
N6—Co1—N1—C1−150.2 (2)N1—C5—C4—C30.7 (5)
O1—Co1—N1—C1−63.0 (2)C2—C3—C4—C50.7 (4)
N3—Co1—N1—C121.9 (2)C3ii—C3—C4—C5−179.4 (3)
N2—Co1—N1—C1126.6 (11)C5—N1—C1—C20.1 (4)
N7—Co1—N1—C5−61.4 (2)Co1—N1—C1—C2−177.5 (2)
N6—Co1—N1—C532.4 (2)C3—C2—C1—N11.4 (5)
O1—Co1—N1—C5119.5 (2)C10—N2—C6—C7−1.4 (5)
N3—Co1—N1—C5−155.6 (2)Co1—N2—C6—C7−178.5 (3)
N2—Co1—N1—C5−50.8 (12)N3—C15—C14—C13−1.8 (4)
C19—S3—O1—Co1−127.1 (2)N2—C6—C7—C8−0.6 (5)
C18—S3—O1—Co1128.3 (2)C9—C8—C7—C62.0 (5)
N7—Co1—O1—S3167.2 (18)C13i—C8—C7—C6−178.6 (3)
N6—Co1—O1—S355.48 (13)N3—C11—C12—C13−1.6 (4)
N3—Co1—O1—S3−122.38 (13)C15—C14—C13—C120.5 (4)
N2—Co1—O1—S3146.08 (13)C15—C14—C13—C8iii−179.4 (2)
N1—Co1—O1—S3−33.25 (13)C11—C12—C13—C141.1 (4)
N6—Co1—N7—C1657.4 (7)C11—C12—C13—C8iii−179.0 (2)
O1—Co1—N7—C16−54 (2)
D—H···AD—HH···AD···AD—H···A
C1—H1···S1iv0.932.823.596 (3)141
Table 1

Selected bond lengths (Å)

Co1—N72.080 (2)
Co1—N62.102 (2)
Co1—O12.1234 (19)
Co1—N32.2187 (19)
Co1—N22.244 (2)
Co1—N12.2551 (19)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C1—H1⋯S1i 0.932.823.596 (3)141

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  In situ solid state formation of copper(I) coordination polymers by thermal reduction of copper(II) precursor compounds: structure and reactivity of [Cu(NCS)2(pyrimidine)2]n.

Authors:  Mario Wriedt; Christian Näther
Journal:  Dalton Trans       Date:  2009-08-28       Impact factor: 4.390

3.  catena-Poly[[diaqua-bis(thio-cyanato-κN)cobalt(II)]-μ-4,4'-bipyridine-κN:N'] 4,4'-bipyridine solvate].

Authors:  Rufu Yao; Dong E Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-24
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.