Literature DB >> 25161519

trans-Bis[2,5-bis-(pyridin-2-yl)-1,3,4-thia-diazole-κ(2) N (2),N (3)]bis-(methanol-κO)iron(II) bis-(perchlorate).

Dominic Kaase1, Julia Klingele1.   

Abstract

The title compound, [Fe(C12H8N4S)2(CH3OH)2](ClO4)2, crystallized in the solvent-free form from a methanol solution. The Fe(II) ion is located on a centre of inversion. The distorted N4O2 octa-hedral coordination geometry is formed by two N,N'-chelating equatorial 2,5-bis-(pyridin-2-yl)-1,3,4-thia-diazole ligands and axially coordinating methanol coligands, resulting in the mononuclear trans-(N (2),N (3),O)2 coordination mode. The methanol co-ligand is involved in a hydrogen bond to the perchlorate counter-ion.

Entities:  

Year:  2014        PMID: 25161519      PMCID: PMC4120561          DOI: 10.1107/S160053681401277X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For other 3d metal structures of 2,5-bis­(pyridin-2-yl)-1,3,4-thia­diazole, see: Klingele et al. (2010 ▶, 2012 ▶); Bentiss, Lagrenee, Mentre et al. (2004 ▶); Bentiss, Lagrenee, Vezin et al. (2004 ▶); Zheng et al. (2006 ▶); Bentiss et al. (2002 ▶); Wan et al. (2007 ▶). For related compounds, see: Guionneau et al. (2004 ▶). For the bridging capability of 4,4′-bispyridine-N,N′-dioxide, see: Jia et al. (2008 ▶).

Experimental

Crystal data

[Fe(C12H8N4S)2(CH4O)2](ClO4)2 M = 799.40 Triclinic, a = 8.8410 (3) Å b = 9.5579 (4) Å c = 9.5875 (4) Å α = 87.169 (2)° β = 88.945 (2)° γ = 74.735 (2)° V = 780.61 (5) Å3 Z = 1 Mo Kα radiation μ = 0.86 mm−1 T = 100 K 0.18 × 0.08 × 0.03 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.861, T max = 0.975 18025 measured reflections 3128 independent reflections 2789 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.062 S = 1.05 3128 reflections 227 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.49 e Å−3 Δρmin = −0.38 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: OLEX2.refine (Puschmann et al., 2013 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) and OLEX2.refine (Puschmann et al., 2013 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2011 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I. DOI: 10.1107/S160053681401277X/lr2128sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681401277X/lr2128Isup2.hkl CCDC reference: 1006207 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Fe(C12H8N4S)2(CH4O)2](ClO4)2Z = 1
Mr = 799.40F(000) = 408
Triclinic, P1Dx = 1.701 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.8410 (3) ÅCell parameters from 9969 reflections
b = 9.5579 (4) Åθ = 2.2–30.5°
c = 9.5875 (4) ŵ = 0.86 mm1
α = 87.169 (2)°T = 100 K
β = 88.945 (2)°Plate, red
γ = 74.735 (2)°0.18 × 0.08 × 0.03 mm
V = 780.61 (5) Å3
Bruker APEXII CCD area-detector diffractometer3128 independent reflections
Radiation source: microfocus sealed tube2789 reflections with I > 2σ(I)
Multilayer mirror optics monochromatorRint = 0.019
φ and ω scansθmax = 26.4°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −11→11
Tmin = 0.861, Tmax = 0.975k = −11→11
18025 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.062H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0172P)2 + 0.9493P] where P = (Fo2 + 2Fc2)/3
3128 reflections(Δ/σ)max < 0.001
227 parametersΔρmax = 0.49 e Å3
0 restraintsΔρmin = −0.38 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Fe10.00001.00000.00000.01139 (10)
S10.22171 (5)0.51392 (5)0.06646 (5)0.01390 (11)
N10.18464 (17)0.89318 (16)−0.14602 (15)0.0128 (3)
N20.05730 (17)0.77550 (16)0.07183 (16)0.0131 (3)
N3−0.00347 (18)0.70371 (17)0.17709 (16)0.0144 (3)
N40.14375 (19)0.33511 (17)0.30380 (17)0.0171 (3)
C10.2469 (2)0.9547 (2)−0.25294 (19)0.0154 (4)
H10.20341.0550−0.27600.018*
C20.3724 (2)0.8783 (2)−0.33180 (19)0.0162 (4)
H20.41300.9255−0.40750.019*
C30.4371 (2)0.7330 (2)−0.2986 (2)0.0154 (4)
H30.52280.6786−0.35100.018*
C40.3748 (2)0.6677 (2)−0.18715 (19)0.0138 (4)
H40.41740.5679−0.16170.017*
C50.2495 (2)0.75062 (19)−0.11400 (18)0.0115 (4)
C60.1740 (2)0.69113 (19)0.00391 (18)0.0118 (4)
C70.0705 (2)0.5668 (2)0.18660 (19)0.0131 (4)
C80.0312 (2)0.4599 (2)0.28666 (19)0.0131 (4)
C9−0.1131 (2)0.4898 (2)0.35465 (19)0.0158 (4)
H9−0.18880.58010.33870.019*
C10−0.1429 (2)0.3835 (2)0.4465 (2)0.0186 (4)
H10−0.24020.39920.49490.022*
C11−0.0285 (2)0.2540 (2)0.4665 (2)0.0200 (4)
H11−0.04620.17940.52880.024*
C120.1125 (2)0.2350 (2)0.3942 (2)0.0201 (4)
H120.19080.14630.40980.024*
C20−0.2991 (2)0.9010 (2)−0.0662 (2)0.0234 (5)
H20A−0.34660.8617−0.14160.035*
H20B−0.37920.9775−0.02230.035*
H20C−0.25520.82320.00360.035*
O20−0.17589 (15)0.96075 (15)−0.12275 (15)0.0173 (3)
H20−0.212 (3)1.021 (3)−0.179 (3)0.026*
Cl10−0.46099 (5)1.25579 (5)−0.29619 (5)0.01521 (11)
O11−0.30426 (17)1.16340 (19)−0.32171 (16)0.0353 (4)
O12−0.47275 (19)1.39590 (16)−0.36152 (17)0.0320 (4)
O13−0.57261 (18)1.19384 (18)−0.35684 (18)0.0339 (4)
O14−0.48818 (18)1.26721 (19)−0.14843 (15)0.0327 (4)
U11U22U33U12U13U23
Fe10.01072 (18)0.00969 (19)0.01282 (19)−0.00126 (14)0.00130 (14)0.00030 (14)
S10.0141 (2)0.0101 (2)0.0162 (2)−0.00128 (17)0.00275 (17)0.00076 (18)
N10.0137 (8)0.0124 (8)0.0118 (8)−0.0027 (6)0.0007 (6)−0.0007 (6)
N20.0133 (7)0.0125 (8)0.0128 (8)−0.0024 (6)0.0018 (6)0.0005 (6)
N30.0159 (8)0.0134 (8)0.0136 (8)−0.0042 (6)0.0017 (6)0.0012 (6)
N40.0202 (8)0.0136 (8)0.0171 (8)−0.0041 (7)0.0023 (7)0.0009 (7)
C10.0184 (9)0.0129 (9)0.0153 (9)−0.0048 (8)0.0005 (7)−0.0001 (7)
C20.0177 (9)0.0198 (10)0.0134 (9)−0.0090 (8)0.0025 (7)−0.0020 (8)
C30.0124 (9)0.0184 (10)0.0163 (9)−0.0047 (7)0.0026 (7)−0.0070 (8)
C40.0137 (9)0.0115 (9)0.0157 (9)−0.0021 (7)−0.0010 (7)−0.0026 (7)
C50.0119 (8)0.0128 (9)0.0104 (8)−0.0041 (7)−0.0022 (7)−0.0014 (7)
C60.0117 (8)0.0109 (9)0.0126 (9)−0.0026 (7)−0.0025 (7)−0.0009 (7)
C70.0115 (9)0.0152 (9)0.0127 (9)−0.0036 (7)−0.0007 (7)−0.0015 (7)
C80.0159 (9)0.0129 (9)0.0118 (9)−0.0060 (7)−0.0007 (7)−0.0015 (7)
C90.0152 (9)0.0170 (10)0.0161 (9)−0.0057 (8)−0.0035 (7)−0.0003 (8)
C100.0184 (10)0.0262 (11)0.0153 (10)−0.0130 (8)0.0002 (8)−0.0026 (8)
C110.0301 (11)0.0198 (10)0.0144 (10)−0.0145 (9)0.0005 (8)0.0011 (8)
C120.0272 (11)0.0131 (10)0.0189 (10)−0.0037 (8)−0.0001 (8)0.0015 (8)
C200.0144 (10)0.0255 (11)0.0320 (12)−0.0074 (8)0.0032 (8)−0.0068 (9)
O200.0145 (7)0.0178 (7)0.0192 (7)−0.0037 (6)−0.0026 (5)0.0009 (6)
Cl100.0138 (2)0.0166 (2)0.0151 (2)−0.00390 (17)0.00130 (17)0.00016 (18)
O110.0177 (8)0.0490 (11)0.0267 (9)0.0102 (7)0.0051 (6)0.0129 (8)
O120.0452 (10)0.0162 (8)0.0349 (9)−0.0095 (7)0.0194 (7)−0.0019 (7)
O130.0289 (9)0.0383 (10)0.0423 (10)−0.0201 (7)0.0035 (7)−0.0160 (8)
O140.0312 (9)0.0527 (11)0.0135 (7)−0.0105 (8)0.0059 (6)−0.0004 (7)
Fe1—O202.0886 (13)C1—C21.391 (3)
Fe1—O20i2.0886 (13)C2—C31.379 (3)
Fe1—N2i2.1516 (15)C3—C41.389 (3)
Fe1—N22.1516 (15)C4—C51.382 (3)
Fe1—N1i2.2015 (15)C5—C61.468 (2)
Fe1—N12.2015 (15)C7—C81.471 (2)
S1—C61.7144 (18)C8—C91.389 (3)
S1—C71.7364 (19)C9—C101.386 (3)
N1—C11.338 (2)C10—C111.384 (3)
N1—C51.354 (2)C11—C121.389 (3)
N2—C61.315 (2)C20—O201.443 (2)
N2—N31.372 (2)Cl10—O131.4232 (15)
N3—C71.299 (2)Cl10—O121.4292 (15)
N4—C121.339 (2)Cl10—O141.4372 (15)
N4—C81.342 (2)Cl10—O111.4574 (15)
O20—Fe1—O20i180.00 (4)C2—C3—C4118.88 (17)
O20—Fe1—N2i91.48 (6)C5—C4—C3118.73 (17)
O20i—Fe1—N2i88.52 (6)N1—C5—C4122.90 (16)
O20—Fe1—N288.52 (6)N1—C5—C6114.25 (16)
O20i—Fe1—N291.48 (6)C4—C5—C6122.85 (16)
N2i—Fe1—N2180.0N2—C6—C5120.39 (16)
O20—Fe1—N1i87.99 (5)N2—C6—S1113.48 (13)
O20i—Fe1—N1i92.01 (5)C5—C6—S1126.13 (14)
N2i—Fe1—N1i76.37 (6)N3—C7—C8124.64 (17)
N2—Fe1—N1i103.63 (6)N3—C7—S1114.73 (13)
O20—Fe1—N192.01 (5)C8—C7—S1120.61 (14)
O20i—Fe1—N187.99 (5)N4—C8—C9124.49 (17)
N2i—Fe1—N1103.63 (6)N4—C8—C7114.70 (16)
N2—Fe1—N176.37 (6)C9—C8—C7120.81 (17)
N1i—Fe1—N1180.0C10—C9—C8117.74 (18)
C6—S1—C786.84 (9)C11—C10—C9118.93 (18)
C1—N1—C5117.61 (16)C10—C11—C12118.91 (18)
C1—N1—Fe1127.76 (12)N4—C12—C11123.43 (19)
C5—N1—Fe1114.39 (11)C20—O20—Fe1123.03 (12)
C6—N2—N3113.63 (15)O13—Cl10—O12109.10 (10)
C6—N2—Fe1114.27 (12)O13—Cl10—O14110.30 (10)
N3—N2—Fe1132.09 (12)O12—Cl10—O14110.33 (10)
C7—N3—N2111.33 (15)O13—Cl10—O11108.75 (10)
C12—N4—C8116.48 (17)O12—Cl10—O11108.62 (9)
N1—C1—C2122.82 (17)O14—Cl10—O11109.71 (9)
C3—C2—C1119.05 (17)
O20—Fe1—N1—C192.67 (15)Fe1—N2—C6—C5−2.5 (2)
O20i—Fe1—N1—C1−87.33 (15)N3—N2—C6—S1−0.96 (19)
N2i—Fe1—N1—C10.65 (16)Fe1—N2—C6—S1178.04 (8)
N2—Fe1—N1—C1−179.35 (16)N1—C5—C6—N2−2.2 (2)
O20—Fe1—N1—C5−93.28 (12)C4—C5—C6—N2178.55 (16)
O20i—Fe1—N1—C586.72 (12)N1—C5—C6—S1177.18 (13)
N2i—Fe1—N1—C5174.71 (12)C4—C5—C6—S1−2.0 (3)
N2—Fe1—N1—C5−5.29 (12)C7—S1—C6—N20.74 (14)
O20—Fe1—N2—C696.46 (13)C7—S1—C6—C5−178.71 (16)
O20i—Fe1—N2—C6−83.54 (13)N2—N3—C7—C8−178.46 (16)
N1i—Fe1—N2—C6−175.97 (12)N2—N3—C7—S1−0.07 (19)
N1—Fe1—N2—C64.03 (12)C6—S1—C7—N3−0.37 (15)
O20—Fe1—N2—N3−84.78 (15)C6—S1—C7—C8178.09 (15)
O20i—Fe1—N2—N395.22 (15)C12—N4—C8—C9−0.7 (3)
N1i—Fe1—N2—N32.79 (16)C12—N4—C8—C7179.92 (17)
N1—Fe1—N2—N3−177.21 (16)N3—C7—C8—N4−163.82 (17)
C6—N2—N3—C70.7 (2)S1—C7—C8—N417.9 (2)
Fe1—N2—N3—C7−178.11 (13)N3—C7—C8—C916.8 (3)
C5—N1—C1—C20.7 (3)S1—C7—C8—C9−161.50 (14)
Fe1—N1—C1—C2174.61 (13)N4—C8—C9—C100.0 (3)
N1—C1—C2—C3−0.5 (3)C7—C8—C9—C10179.33 (17)
C1—C2—C3—C4−0.1 (3)C8—C9—C10—C110.3 (3)
C2—C3—C4—C50.3 (3)C9—C10—C11—C120.1 (3)
C1—N1—C5—C4−0.4 (3)C8—N4—C12—C111.2 (3)
Fe1—N1—C5—C4−175.14 (13)C10—C11—C12—N4−0.9 (3)
C1—N1—C5—C6−179.67 (15)N2i—Fe1—O20—C20−124.06 (14)
Fe1—N1—C5—C65.64 (19)N2—Fe1—O20—C2055.94 (14)
C3—C4—C5—N1−0.1 (3)N1i—Fe1—O20—C20−47.76 (14)
C3—C4—C5—C6179.08 (16)N1—Fe1—O20—C20132.24 (14)
N3—N2—C6—C5178.53 (15)
D—H···AD—HH···AD···AD—H···A
O20—H20···O110.78 (3)1.91 (3)2.690 (2)178 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O20—H20⋯O110.78 (3)1.91 (3)2.690 (2)178 (3)
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Multi-dimensional transition-metal coordination polymers of 4,4'-bipyridine-N,N'-dioxide: 1D chains and 2D sheets.

Authors:  Junhua Jia; Alexander J Blake; Neil R Champness; Peter Hubberstey; Claire Wilson; Martin Schröder
Journal:  Inorg Chem       Date:  2008-08-29       Impact factor: 5.165

3.  Two-step spin crossover in the mononuclear iron(II) complex [Fe(II)(L)(2)(NCS)(2)] (L = 2,5-di-(2-pyridyl)-1,3,4-thiadiazole).

Authors:  Julia Klingele; Dominik Kaase; Marco H Klingele; Jochen Lach; Serhiy Demeshko
Journal:  Dalton Trans       Date:  2009-12-15       Impact factor: 4.390

4.  Synthesis and mononuclear complexes of the bis-bidentate ligand 2,5-di(2-pyridyl)-1,3,4-thiadiazole (dptd): spin crossover in [Fe(II)(dptd)2(NCSe)2] and [Fe(II)(dptd)2(NCBH3)2]·H2O.

Authors:  Julia Klingele; Dominic Kaase; Marco H Klingele; Jochen Lach
Journal:  Dalton Trans       Date:  2011-11-29       Impact factor: 4.390

5.  Intermolecular magnetic couplings in the dinuclear copper(II) complex mu-chloro-mu-[2,5-bis(2-pyridyl)-1,3,4-thiadiazole] aqua chlorocopper(II) dichlorocopper(II): synthesis, crystal structure, and EPR and magnetic characterization.

Authors:  Fouad Bentiss; Michel Lagrenée; Olivier Mentré; Pierre Conflant; Hervé Vezin; Jean Pierre Wignacourt; Elizabeth M Holt
Journal:  Inorg Chem       Date:  2004-03-22       Impact factor: 5.165

  5 in total
  2 in total

1.  Crystal structure of bis-(azido-κN)bis[2,5-bis(pyridin-2-yl)-1,3,4-thia-diazole-κ(2) N (2),N (3)]cobalt(II).

Authors:  Abdelhakim Laachir; Fouad Bentiss; Salaheddine Guesmi; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-04-09

2.  Crystal structure of bis-[2,5-bis-(pyridin-2-yl)-1,3,4-thia-diazole-κ(2) N (2),N (3)]bis-(thio-cyanato-κS)copper(II).

Authors:  Abdelhakim Laachir; Fouad Bentiss; Salaheddine Guesmi; Mohamed Saadi; Lahcen El Ammari
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2016-07-22
  2 in total

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