Literature DB >> 25159620

Multiple stable conformations account for reversible concentration-dependent oligomerization and autoinhibition of a metamorphic metallopeptidase.

Mar López-Pelegrín1, Núria Cerdà-Costa, Anna Cintas-Pedrola, Fátima Herranz-Trillo, Pau Bernadó, Juan R Peinado, Joan L Arolas, F Xavier Gomis-Rüth.   

Abstract

Molecular plasticity controls enzymatic activity: the native fold of a protein in a given environment is normally unique and at a global free-energy minimum. Some proteins, however, spontaneously undergo substantial fold switching to reversibly transit between defined conformers, the "metamorphic" proteins. Here, we present a minimal metamorphic, selective, and specific caseinolytic metallopeptidase, selecase, which reversibly transits between several different states of defined three-dimensional structure, which are associated with loss of enzymatic activity due to autoinhibition. The latter is triggered by sequestering the competent conformation in incompetent but structured dimers, tetramers, and octamers. This system, which is compatible with a discrete multifunnel energy landscape, affords a switch that provides a reversible mechanism of control of catalytic activity unique in nature.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  metallopeptidases; metamorphic proteins; protein folding; protein structures

Mesh:

Substances:

Year:  2014        PMID: 25159620     DOI: 10.1002/anie.201405727

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  11 in total

Review 1.  Structural metamorphism and polymorphism in proteins on the brink of thermodynamic stability.

Authors:  Prakash Kulkarni; Tsega L Solomon; Yanan He; Yihong Chen; Philip N Bryan; John Orban
Journal:  Protein Sci       Date:  2018-09-24       Impact factor: 6.725

2.  Specific binding-induced modulation of the XCL1 metamorphic equilibrium.

Authors:  Acacia F Dishman; Francis C Peterson; Brian F Volkman
Journal:  Biopolymers       Date:  2020-09-28       Impact factor: 2.505

3.  A sequence-based method for predicting extant fold switchers that undergo α-helix ↔ β-strand transitions.

Authors:  Soumya Mishra; Loren L Looger; Lauren L Porter
Journal:  Biopolymers       Date:  2021-09-09       Impact factor: 2.240

Review 4.  Unfolding the Mysteries of Protein Metamorphosis.

Authors:  Acacia F Dishman; Brian F Volkman
Journal:  ACS Chem Biol       Date:  2018-06-07       Impact factor: 5.100

5.  Inaccurate secondary structure predictions often indicate protein fold switching.

Authors:  Soumya Mishra; Loren L Looger; Lauren L Porter
Journal:  Protein Sci       Date:  2019-06-17       Impact factor: 6.725

6.  Sequence-Based Prediction of Metamorphic Behavior in Proteins.

Authors:  Nanhao Chen; Madhurima Das; Andy LiWang; Lee-Ping Wang
Journal:  Biophys J       Date:  2020-08-14       Impact factor: 4.033

Review 7.  Wrangling Shape-Shifting Morpheeins to Tackle Disease and Approach Drug Discovery.

Authors:  Eileen K Jaffe
Journal:  Front Mol Biosci       Date:  2020-11-27

8.  Metamorphic proteins: the Janus proteins of structural biology.

Authors:  Kulkarni Madhurima; Bodhisatwa Nandi; Ashok Sekhar
Journal:  Open Biol       Date:  2021-04-21       Impact factor: 6.411

9.  Evolution of fold switching in a metamorphic protein.

Authors:  Acacia F Dishman; Robert C Tyler; Jamie C Fox; Andrew B Kleist; Kenneth E Prehoda; M Madan Babu; Francis C Peterson; Brian F Volkman
Journal:  Science       Date:  2021-01-01       Impact factor: 47.728

Review 10.  Moonlighting Proteins in the Fuzzy Logic of Cellular Metabolism.

Authors:  Haipeng Liu; Constance J Jeffery
Journal:  Molecules       Date:  2020-07-29       Impact factor: 4.411

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