Literature DB >> 25157145

A critical reanalysis of the relationship between genomics and well-being.

Nicholas J L Brown1, Douglas A MacDonald2, Manoj Pratim Samanta3, Harris L Friedman4, James C Coyne5.   

Abstract

Fredrickson et al. [Fredrickson BL, et al. (2013) Proc Natl Acad Sci USA 110(33):13684-13689] claimed to have observed significant differences in gene expression related to hedonic and eudaimonic dimensions of well-being. Having closely examined both their claims and their data, we draw substantially different conclusions. After identifying some important conceptual and methodological flaws in their argument, we report the results of a series of reanalyses of their dataset. We first applied a variety of exploratory and confirmatory factor analysis techniques to their self-reported well-being data. A number of plausible factor solutions emerged, but none of these corresponded to Fredrickson et al.'s claimed hedonic and eudaimonic dimensions. We next examined the regression analyses that purportedly yielded distinct differential profiles of gene expression associated with the two well-being dimensions. Using the best-fitting two-factor solution that we identified, we obtained effects almost twice as large as those found by Fredrickson et al. using their questionable hedonic and eudaimonic factors. Next, we conducted regression analyses for all possible two-factor solutions of the psychometric data; we found that 69.2% of these gave statistically significant results for both factors, whereas only 0.25% would be expected to do so if the regression process was really able to identify independent differential gene expression effects. Finally, we replaced Fredrickson et al.'s psychometric data with random numbers and continued to find very large numbers of apparently statistically significant effects. We conclude that Fredrickson et al.'s widely publicized claims about the effects of different dimensions of well-being on health-related gene expression are merely artifacts of dubious analyses and erroneous methodology.

Keywords:  epigenetics; genomic perspectives; leukocytes; transcriptional response

Mesh:

Year:  2014        PMID: 25157145      PMCID: PMC4156729          DOI: 10.1073/pnas.1407057111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  9 in total

1.  Evaluating the psychometric properties of the Mental Health Continuum-Short Form (MHC-SF).

Authors:  Sanne M A Lamers; Gerben J Westerhof; Ernst T Bohlmeijer; Peter M ten Klooster; Corey L M Keyes
Journal:  J Clin Psychol       Date:  2011-01

2.  Evaluation of the mental health continuum-short form (MHC-SF) in setswana-speaking South Africans.

Authors:  Corey L M Keyes; Marié Wissing; Johan P Potgieter; Michael Temane; Annamarie Kruger; Sinette van Rooy
Journal:  Clin Psychol Psychother       Date:  2008 May-Jun

3.  Reply to Coyne: Genomic analyses are unthwarted.

Authors:  Steven W Cole; Barbara L Fredrickson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-05       Impact factor: 11.205

4.  Highly correlated hedonic and eudaimonic well-being thwart genomic analysis.

Authors:  James C Coyne
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-17       Impact factor: 11.205

Review 5.  Sources of method bias in social science research and recommendations on how to control it.

Authors:  Philip M Podsakoff; Scott B MacKenzie; Nathan P Podsakoff
Journal:  Annu Rev Psychol       Date:  2011-08-11       Impact factor: 24.137

Review 6.  The illusion of mental health.

Authors:  J Shedler; M Mayman; M Manis
Journal:  Am Psychol       Date:  1993-11

Review 7.  Positive illusions and well-being revisited: separating fact from fiction.

Authors:  S E Taylor; J D Brown
Journal:  Psychol Bull       Date:  1994-07       Impact factor: 17.737

8.  A single-molecule long-read survey of the human transcriptome.

Authors:  Donald Sharon; Hagen Tilgner; Fabian Grubert; Michael Snyder
Journal:  Nat Biotechnol       Date:  2013-10-13       Impact factor: 54.908

9.  A functional genomic perspective on human well-being.

Authors:  Barbara L Fredrickson; Karen M Grewen; Kimberly A Coffey; Sara B Algoe; Ann M Firestine; Jesusa M G Arevalo; Jeffrey Ma; Steven W Cole
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-29       Impact factor: 11.205

  9 in total
  11 in total

1.  Errors in the Brown et al. critical reanalysis.

Authors:  Steven W Cole; Barbara L Fredrickson
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-25       Impact factor: 11.205

2.  Big Five Personality and CTRA gene expression: Lack of association in a midlife sample of US adults (MIDUS-Refresher).

Authors:  Kelsey A Hobbs; Frank D Mann; Steven W Cole; Robert F Krueger
Journal:  Pers Individ Dif       Date:  2020-02-28

3.  Psychological well-being and the human conserved transcriptional response to adversity.

Authors:  Barbara L Fredrickson; Karen M Grewen; Sara B Algoe; Ann M Firestine; Jesusa M G Arevalo; Jeffrey Ma; Steve W Cole
Journal:  PLoS One       Date:  2015-03-26       Impact factor: 3.240

Review 4.  From big data analysis to personalized medicine for all: challenges and opportunities.

Authors:  Akram Alyass; Michelle Turcotte; David Meyre
Journal:  BMC Med Genomics       Date:  2015-06-27       Impact factor: 3.063

Review 5.  Genetics of wellbeing and its components satisfaction with life, happiness, and quality of life: a review and meta-analysis of heritability studies.

Authors:  Meike Bartels
Journal:  Behav Genet       Date:  2015-02-26       Impact factor: 2.805

Review 6.  More Questions than Answers: Continued Critical Reanalysis of Fredrickson et al.'s Studies of Genomics and Well-Being.

Authors:  Nicholas J L Brown; Douglas A MacDonald; Manoj P Samanta; Harris L Friedman; James C Coyne
Journal:  PLoS One       Date:  2016-06-07       Impact factor: 3.240

7.  Replication initiatives will not salvage the trustworthiness of psychology.

Authors:  James C Coyne
Journal:  BMC Psychol       Date:  2016-05-31

8.  Selective Data Analysis in Brown et al.'s Continued Critical Reanalysis.

Authors:  Barbara L Fredrickson
Journal:  PLoS One       Date:  2016-08-04       Impact factor: 3.240

9.  Monte Carlo simulation of OLS and linear mixed model inference of phenotypic effects on gene expression.

Authors:  Jeffrey A Walker
Journal:  PeerJ       Date:  2016-10-11       Impact factor: 2.984

10.  Implications of Debunking the "Critical Positivity Ratio" for Humanistic Psychology: Introduction to Special Issue.

Authors:  Harris L Friedman; Nicholas J L Brown
Journal:  J Humanist Psychol       Date:  2018-03-29
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