Literature DB >> 25149440

Rational design of carbonitrile-carboxaldehyde cation receptor models: probing the nature of the heteroatom-metal interaction.

Ahmad Nazmi Rosli1, Maizathul Akmam Abu Bakar, Vannajan Sanghiran Lee, Sharifuddin Md Zain, Mohd Rais Ahmad, Ninie Suhana Abdul Manan, Yatimah Alias, Pei Meng Woi.   

Abstract

In this work, hybrid functional and G4 methods were employed in the rational design of carbonitrile-carboxaldehyde receptor models for cation recognition. Electron-sharing and ionic interactions between the models and the cations were analyzed utilizing the concepts of overlap population, atomic valence, electrostatic potential, and CHELPG charge in order to elucidate the nature of the heteroatom-metal interaction, the N versus O disparity, and the effect of pH. Receptor fragment models from ionomycin were employed to rationalize the selection of receptor models for discriminating group I cations and enhancing the selectivity for Mg(II) rather than Ca(II), and to examine the effects of keto-enol forms and negatively charged sites. The changes in geometries, overlap population, metal valence, and CHELPG charge upon solvation in heptane medium as compared to the gas phase were negligible. The optimized geometries reveal that the interaction between group II cations and the keto, enol, and enolate forms of 2-cyanoethanal causes 12 % bending of the C-C-N angle from linearity. Overlap populations show that the electron-sharing interaction favors group II cations but that the same mechanism allows Li(I) to compete. The total spin of Li(I) is 17 % greater than that of Ca(II), but the G4 binding energies of the two are separated by more than 50 kcal/mol, favoring group II cations, which may eliminate interference from Li(I). 1,2-Dicyanoethylene, which has only one form, shows similar characteristics. CHELPG analysis shows that Mg(II) transfers 25 and 18 % of its positive charge to 2-cyanoethanal enolate and 1,2-dicyanoethylene, respectively. Hydrogen atoms receive most of the positive charge in both receptors, but the N-termini exhibit strikingly different characteristics. Electrostatic potential contour profiles were found to be in good agreement with the atomic charge distributions. The application of uncharged 1,3-dicarbonyl and 2-cyanocarbonyl receptors and a judicious choice of polymeric membrane that suppresses the Hofmeister effect should lead to high selectivity for magnesium, whereas the utilization of multiple negatively charged ionophores should result in selectivity for calcium.

Entities:  

Year:  2014        PMID: 25149440     DOI: 10.1007/s00894-014-2428-9

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  20 in total

Review 1.  Selectivity of potentiometric ion sensors.

Authors:  E Bakker; E Pretsch; P Bühlmann
Journal:  Anal Chem       Date:  2000-03-15       Impact factor: 6.986

2.  Balanced basis sets of split valence, triple zeta valence and quadruple zeta valence quality for H to Rn: Design and assessment of accuracy.

Authors:  Florian Weigend; Reinhart Ahlrichs
Journal:  Phys Chem Chem Phys       Date:  2005-08-04       Impact factor: 3.676

Review 3.  Interactions between macromolecules and ions: The Hofmeister series.

Authors:  Yanjie Zhang; Paul S Cremer
Journal:  Curr Opin Chem Biol       Date:  2006-10-10       Impact factor: 8.822

4.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

5.  Ca2+ transport properties of ionophores A23187, ionomycin, and 4-BrA23187 in a well defined model system.

Authors:  W L Erdahl; C J Chapman; R W Taylor; D R Pfeiffer
Journal:  Biophys J       Date:  1994-05       Impact factor: 4.033

6.  Selectivity of polymer membrane-based ion-selective electrodes: self-consistent model describing the potentiometric response in mixed ion solutions of different charge.

Authors:  E Bakker; R K Meruva; E Pretsch; M E Meyerhoff
Journal:  Anal Chem       Date:  1994-10-01       Impact factor: 6.986

7.  Role of carboxylate side chains in the cation Hofmeister series.

Authors:  Jaibir Kherb; Sarah C Flores; Paul S Cremer
Journal:  J Phys Chem B       Date:  2012-06-14       Impact factor: 2.991

Review 8.  Physiological functions of mineral macronutrients.

Authors:  Frans J M Maathuis
Journal:  Curr Opin Plant Biol       Date:  2009-05-25       Impact factor: 7.834

9.  Effects of pH conditions on Ca2+ transport catalyzed by ionophores A23187, 4-BrA23187, and ionomycin suggest problems with common applications of these compounds in biological systems.

Authors:  W L Erdahl; C J Chapman; R W Taylor; D R Pfeiffer
Journal:  Biophys J       Date:  1995-12       Impact factor: 4.033

10.  The 2011 report on dietary reference intakes for calcium and vitamin D from the Institute of Medicine: what clinicians need to know.

Authors:  A Catharine Ross; JoAnn E Manson; Steven A Abrams; John F Aloia; Patsy M Brannon; Steven K Clinton; Ramon A Durazo-Arvizu; J Christopher Gallagher; Richard L Gallo; Glenville Jones; Christopher S Kovacs; Susan T Mayne; Clifford J Rosen; Sue A Shapses
Journal:  J Clin Endocrinol Metab       Date:  2010-11-29       Impact factor: 5.958

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  2 in total

1.  Computational evaluation of unsaturated carbonitriles as neutral receptor model for beryllium(II) recognition.

Authors:  Ahmad Nazmi Rosli; Mohd Rais Ahmad; Yatimah Alias; Sharifuddin Md Zain; Vannajan Sanghiran Lee; Pei Meng Woi
Journal:  J Mol Model       Date:  2014-11-30       Impact factor: 1.810

2.  Rational Design of a Fluorescent Chromophore as a Calcium Receptor via DFT and Multivariate Approaches.

Authors:  Leila Narimani; Vannajan Sanghiran Lee; Yatimah Alias; Ninie Suhana Manan; Pei Meng Woi
Journal:  Molecules       Date:  2022-09-22       Impact factor: 4.927

  2 in total

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