Literature DB >> 25146171

Ribozymes that can be regulated by external stimuli.

Jennifer Frommer1, Bettina Appel1, Sabine Müller2.   

Abstract

Ribozymes have been known for about 30 years, and nowadays are understood well enough to be turned into useful tools for a number of applications in vitro and in vivo. Allosteric ribozymes switch on and off their activity in response to a specific chemical (ligand) or physical (temperature, light) signal. The possibility of controlling ribozyme activity by external stimuli is of particular relevance for applications in different fields, such as environmental and medicinal diagnostics, molecular computing, control of gene expression and others. Herein, we review recent advances and describe selected examples of addressable ribozymes.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 25146171     DOI: 10.1016/j.copbio.2014.07.009

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  9 in total

1.  Optimization of a novel biophysical model using large scale in vivo antisense hybridization data displays improved prediction capabilities of structurally accessible RNA regions.

Authors:  Jorge Vazquez-Anderson; Mia K Mihailovic; Kevin C Baldridge; Kristofer G Reyes; Katie Haning; Seung Hee Cho; Paul Amador; Warren B Powell; Lydia M Contreras
Journal:  Nucleic Acids Res       Date:  2017-05-19       Impact factor: 16.971

2.  Riboswitch-mediated Attenuation of Transgene Cytotoxicity Increases Adeno-associated Virus Vector Yields in HEK-293 Cells.

Authors:  Benjamin Strobel; Benedikt Klauser; Jörg S Hartig; Thorsten Lamla; Florian Gantner; Sebastian Kreuz
Journal:  Mol Ther       Date:  2015-07-03       Impact factor: 11.454

Review 3.  RNA-based fluorescent biosensors for live cell imaging of small molecules and RNAs.

Authors:  Yichi Su; Ming C Hammond
Journal:  Curr Opin Biotechnol       Date:  2020-02-19       Impact factor: 9.740

Review 4.  Genetically encoded RNA nanodevices for cellular imaging and regulation.

Authors:  Qikun Yu; Kewei Ren; Mingxu You
Journal:  Nanoscale       Date:  2021-05-06       Impact factor: 7.790

5.  High-throughput assay and engineering of self-cleaving ribozymes by sequencing.

Authors:  Shungo Kobori; Yoko Nomura; Anh Miu; Yohei Yokobayashi
Journal:  Nucleic Acids Res       Date:  2015-03-30       Impact factor: 16.971

Review 6.  Thirty-five years of research into ribozymes and nucleic acid catalysis: where do we stand today?

Authors:  Sabine Müller; Bettina Appel; Darko Balke; Robert Hieronymus; Claudia Nübel
Journal:  F1000Res       Date:  2016-06-27

7.  Prebiotic Factors Influencing the Activity of a Ligase Ribozyme.

Authors:  Fabrizio Anella; Christophe Danelon
Journal:  Life (Basel)       Date:  2017-04-06

8.  Changed reactivity of secondary hydroxy groups in C8-modified adenosine - lessons learned from silylation.

Authors:  Jennifer Frommer; Sabine Müller
Journal:  Beilstein J Org Chem       Date:  2020-11-23       Impact factor: 2.883

9.  High-Throughput Mutational Analysis of a Twister Ribozyme.

Authors:  Shungo Kobori; Yohei Yokobayashi
Journal:  Angew Chem Int Ed Engl       Date:  2016-07-27       Impact factor: 15.336

  9 in total

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