Literature DB >> 25142511

Sequential processing of quantitative phase images for the study of cell behaviour in real-time digital holographic microscopy.

T Zikmund1, L Kvasnica, M Týč, A Křížová, J Colláková, R Chmelík.   

Abstract

Transmitted light holographic microscopy is particularly used for quantitative phase imaging of transparent microscopic objects such as living cells. The study of the cell is based on extraction of the dynamic data on cell behaviour from the time-lapse sequence of the phase images. However, the phase images are affected by the phase aberrations that make the analysis particularly difficult. This is because the phase deformation is prone to change during long-term experiments. Here, we present a novel algorithm for sequential processing of living cells phase images in a time-lapse sequence. The algorithm compensates for the deformation of a phase image using weighted least-squares surface fitting. Moreover, it identifies and segments the individual cells in the phase image. All these procedures are performed automatically and applied immediately after obtaining every single phase image. This property of the algorithm is important for real-time cell quantitative phase imaging and instantaneous control of the course of the experiment by playback of the recorded sequence up to actual time. Such operator's intervention is a forerunner of process automation derived from image analysis. The efficiency of the propounded algorithm is demonstrated on images of rat fibrosarcoma cells using an off-axis holographic microscope.
© 2014 The Authors Journal of Microscopy © 2014 Royal Microscopical Society.

Entities:  

Keywords:  Aberration compensation; cell tracking; digital image processing; quantitative phase imaging; real-time holography

Mesh:

Year:  2014        PMID: 25142511     DOI: 10.1111/jmi.12165

Source DB:  PubMed          Journal:  J Microsc        ISSN: 0022-2720            Impact factor:   1.758


  4 in total

1.  Quantitative assessment of cancer cell morphology and motility using telecentric digital holographic microscopy and machine learning.

Authors:  Van K Lam; Thanh C Nguyen; Byung M Chung; George Nehmetallah; Christopher B Raub
Journal:  Cytometry A       Date:  2017-12-28       Impact factor: 4.355

2.  Multimodal holographic microscopy: distinction between apoptosis and oncosis.

Authors:  Jan Balvan; Aneta Krizova; Jaromir Gumulec; Martina Raudenska; Zbysek Sladek; Miroslava Sedlackova; Petr Babula; Marketa Sztalmachova; Rene Kizek; Radim Chmelik; Michal Masarik
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

3.  Geometric-Phase Microscopy for Quantitative Phase Imaging of Isotropic, Birefringent and Space-Variant Polarization Samples.

Authors:  Petr Bouchal; Lenka Štrbková; Zbyněk Dostál; Radim Chmelík; Zdeněk Bouchal
Journal:  Sci Rep       Date:  2019-03-05       Impact factor: 4.379

4.  Automated interpretation of time-lapse quantitative phase image by machine learning to study cellular dynamics during epithelial-mesenchymal transition.

Authors:  Lenka Strbkova; Brittany B Carson; Theresa Vincent; Pavel Vesely; Radim Chmelik
Journal:  J Biomed Opt       Date:  2020-08       Impact factor: 3.170

  4 in total

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