Literature DB >> 25137529

Iminosugar C-glycoside analogues of α-D-GlcNAc-1-phosphate: synthesis and bacterial transglycosylase inhibition.

Che-Hsiung Hsu1, Mathias Schelwies, Sebastian Enck, Lin-Ya Huang, Shih-Hsien Huang, Yi-Fan Chang, Ting-Jen Rachel Cheng, Wei-Chieh Cheng, Chi-Huey Wong.   

Abstract

We herein describe the first synthesis of iminosugar C-glycosides of α-D-GlcNAc-1-phosphate in 10 steps starting from unprotected D-GlcNAc. A diastereoselective intramolecular iodoamination-cyclization as the key step was employed to construct the central piperidine ring of the iminosugar and the C-glycosidic structure of α-D-GlcNAc. Finally, the iminosugar phosphonate and its elongated phosphate analogue were accessed. These phosphorus-containing iminosugars were coupled efficiently with lipophilic monophosphates to give lipid-linked pyrophosphate derivatives, which are lipid II mimetics endowed with potent inhibitory properties toward bacterial transglycosylases (TGase).

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25137529      PMCID: PMC4168788          DOI: 10.1021/jo501340s

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


Introduction

Iminosugars are central structural motifs of small molecules that act by inhibition of glycosidases or glycosyltransferases.[1] Their strong inhibitory activity is attributed to electrostatic binding interactions of the protonated nitrogen under physiological conditions and to their “oxocarbenium-ion-like” structure that mimics the transition state of the formation/cleavage of the glycosidic linkage.[2] Iminosugars have shown potential as therapeutics toward cancer as well as viral and bacterial infections and are used for the treatment of type 2 diabetes.[1,3] Because of the rise of infections from antibiotic-resistant bacteria such as methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococci (VRE), it is of great interest to develop new drugs targeting the conserved region of the bacterial cell wall.[4] Peptidoglycan transglycosylase (TGase) is the enzyme responsible for catalyzing the polymerization of β1,4-linked N-acetylglucosamine-N-acetylmuramic acid (GlcNAc-MurNAc) disaccharide of lipid II to form the bacterial cell wall.[5] TGases are attractive targets for antibacterial agents because they are essential enzymes located on the external cell surface and because no eukaryotic counterpart is known.[6] The only well-characterized TGase inhibitor, moenomycin (Moe), however, is not effective in humans because of its poor pharmacokinetic properties.[7] From recent structural studies,[8] the transglycosylation mechanism employed by TGase is that of a SN2-like reaction, which is similar to other inverting glycosyltransferases (Figure 1).[9] Therefore, we expect iminosugar-based lipid II mimetics to be potent substrate-based inhibitors that mimic the transition state of TGase transglycosylation (Scheme 1).[10] However, the idea has been tested only with pyrrolidine mimics that were discovered by a combinatorial approach.[11] Six-membered iminosugars would better represent the natural N-acetylglucosamine hydroxyl configurations, but they have yet to be studied.
Figure 1

Transglycosylation by TGase to synthesize peptidoglycans.

Scheme 1

Iminosugar C-Glycosidic Lipid II Analogue

Transglycosylation by TGase to synthesize peptidoglycans. Herein, we report structural iminosugar C-glycosidic lipid II analogues such as compound 1 (Scheme 1), which contains a simplified structure (e.g., shorter lipid chain and no peptide moiety) when compared to that of lipid II but still possesses a core structure with the potential to inhibit TGase. Also, a molecule with a C-glycosidic linkage is expected to be stable toward enzymatic hydrolysis. The synthesis of compound 1 is challenging because the iminosugar α-C-glycoside of phosphonate analogue 2 has to be realized. Only a few examples have been found for the synthesis of iminosugar analogues of GlcNAc.[12] Herein, we present the synthesis of phosphonate 2 and its phosphate analogue. These compounds can be used to efficiently construct lipid-linked pyrophosphate analogues such as 1 that have the potential to display potent bacterial TGase inhibition.

Results and Discussion

To construct the iminosugar C-glycoside core of GlcNAc, we utilized a ring-opening/cyclization strategy.[13] Key steps are a Wittig reaction followed by oxidation and reductive amination leading to a diaminohepenitol, followed by an NIS-mediated cyclization. Similar synthetic strategies were known before,[13] but have never been applied successfully to GlcNAc. The synthesis of diaminoheptenitols is depicted in Scheme 2. Starting from GlcNAc, compound 3 was prepared[14] and subjected to optimized Wittig conditions. The obtained aminoheptenitol 4(15) had to be transformed into the corresponding amine to construct the piperidine ring. Epimerization at C-6 of 4 followed by reinversion with a nitrogen nucleophile was attempted but was found not to be applicable to GlcNAc derivatives because the nitrogen substituent in the 3-position leads to the formation of a pyrrolidine when the hydroxyl group of 4 is transformed into a good leaving group. Converting the hydroxyl group to an amine was best completed by an oxidation/reductive amination sequence.[16] The ketone obtained by Swern oxidation was found to be in equilibrium with N-acyl hemiaminal 5 (typical 13C NMR appearance of the C-2 quaternary carbon at δ = 91 ppm),[17] which was stable and could be subjected to reductive amination directly without purification. Optimization of the reaction conditions led to the use of excess NaBH3CN/NH4OAc (10 equiv) at 50 °C in methanol. Under the optimal reaction conditions, diaminoheptenitols 6a and 6b were synthesized in 64% over two steps, with the (6R) diastereomer being the main product in a ratio 6a/6b (6R/6S) = 67:33. The ratio was determined by NMR analysis of the NH protons of 6a and 6b acetamides in the crude product. It is noteworthy that the use of other amine sources such as benzyl amine gave higher yield and selectivity of the (6R) diastereomer, but the subsequent cyclization reaction was not successful.
Scheme 2

Synthesis of Diaminoheptenitols 6a and 6b

In the next step toward the synthesis of 7a, the cyclization of 6a by internal iodoamination proceeds with a very high degree of stereoselectivity to form exclusively the α-epimer (Scheme 3).[13b] The configuration of the stable compound 7a was determined by NMR analysis. Early attempts to determine the two newly formed stereocenters at C-2 and C-6 on the basis of NMR parameters of 7a failed. However, small coupling constants and the absence of 1,3-diaxial NOE contacts indicated that the conformation of 7a was not a chair, but it was difficult to obtain unambiguous proof of its exact configuration (see Figure S1). The structure of 7a was finally determined by analyzing bicyclic oxazine 9, a side product in the synthesis of 8 (a C2-acetamido analogue of homonojirimycin, HNJ), that was obtained by treating iodo derivative 7a with silver acetate in THF/H2O (Scheme 3). The bicyclic system locks the sugar ring in the chair conformation (4C1),[18] in which the C-2 substituent is in an axial position. NOEs indicate spatial proximity of H3 and H5 on one side of the ring and of H4 and H6 on the other side, respectively (Figure 2). In addition, larger coupling constants throughout the molecule are observed, which indicates larger vicinal diaxial coupling constants associated with the d-gluco conformation.[19]
Scheme 3

Oxazine 9 for Structural Determination

Figure 2

Coupling constants and NOEs of bicyclic iminosugar 9. Abbreviations of the NOE intensities are as follows: s, strong; m, medium; and w, weak.

Coupling constants and NOEs of bicyclic iminosugar 9. Abbreviations of the NOE intensities are as follows: s, strong; m, medium; and w, weak. The synthesis of the first GlcNAc-derived iminosugar phosphonate was achieved for the d-gluco series of compounds, but initial attempts were not successful. The intramolecular formation of aziridine intermediate 11 dominated in reactions employing bases such as Cs2CO3 (Scheme 4). The problem was solved by using a bulkier base such as NaHDMS. Substitution of the iodine of 7a by deprotonated dibenzylphosphite using NaHDMS led to the isolation of protected phosphonate 10 in moderate yield (Scheme 4). Debenzylation of 10 was achieved to afford 2 in high yield with Pd/C under a H2 atmosphere in a solvent mixture of THF/H2O/AcOH. In addition to the phosphonate group, the versatile iodo intermediate 7a enabled the introduction of structural diversity, such as the introduction of the azido group (Scheme 5).
Scheme 4

Synthesis of Phosphonate Analogue 2

Scheme 5

Synthesis of Azido Derivative 12

We are also interested in the synthesis of an analogue with an extended phosphate group that has been found in several glycosyltransferase inhibitors.[20] The endocyclic secondary amine function of 8 was initially required to be protected because the amine group would engage in the phosphorylation reaction, causing low yields. As a result, carboxybenzyl (Cbz)-protected iminoheptitol 13 was prepared and transformed into phosphate 14 in good yield by using the phosphoramidite method (Scheme 6). The nitrogen was Cbz-protected because alkyl or aryl protecting groups gave significant amounts of N-oxide after treatment with mCPBA. Deprotection of 14 by Pd/H2 in THF/H2O/AcOH afforded the desired glycosyl phosphate mimetic 15 in 90%.
Scheme 6

Synthesis of Phosphate Analogue 15

Because l-iminosugars are being increasingly appreciated for pharmaceutical purposes,[21] the procedure also offers access to l-ido imino-C-glycosides of GlcNAc-1-phosphate 17 (Scheme 7), which allows biological studies to be extended to the unnatural (l-ido) derivatives. The structure of 17 was determined as the l-ido-isomer in a 1C4-configuration by NMR analysis (see Figure S2).
Scheme 7

Synthesis of l-ido Analogue 17

To synthesize lipid II analogues, phosphonate 2 and phosphate 15 were transformed into the corresponding pyrophosphates (Scheme 8). C15- (18, farnesyl) and C20-phosphates (19, geranylgeranyl) were attached using the carbonyldiimidazole (CDI) method.[22] Accordingly, we treated the ammonium salt of lipid monophosphates 18 and 19 with CDI to generate a highly reactive monophosphate imidazolide in situ, which was subsequently reacted with iminosugars 2 and 15. Surprisingly, pyrophosphate products 20, 21, and 1 were obtained in good yields (56–70%) with only a small amount of self-coupled product of lipid monophosphate.
Scheme 8

Synthesis of Lipid-Linked Pyrophosphate Analogues

Clostridium difficile is a Gram-positive spore-forming bacterium that can cause severe infectious diarrhea. The frequency C. difficile infection has significantly increased in North America and worldwide in recent years and is becoming one of the major causes of morbidity in healthcare facilities.[23] Because targeting C. difficile cell wall synthesis has proved to be successful,[24] we are interested in developing new C. difficile TGase inhibitors by our newly synthesized iminosugars. The inhibitory activity of compounds 2, 15, and 17 against C. difficile TGase was then evaluated by the HPLC-based TGase assay.[25] Unfortunately, none of these derivatives (lacking a lipophilic moiety) displayed a measurable inhibition at 500 and 100 μM. It is noted that the TGase inhibition results of the three lipid-linked compounds, 20, 21, and 1, showed increased inhibition against TGase (Table 1). It is clear that the presence of a lipid chain provides increased potency, possibly due to increased lipophilicity and increased binding to TGases.[26] By comparison of 20 and 21, the elongation of the bond length between the lipid and the sugar was found to decrease the inhibition activity from 100 to 50% (500 μM) and 30 to 0% (100 μM), suggesting that the phosphonate moiety is a better precursor for this design. The C20 derivative 1 exhibited the best inhibitory potency against C. difficile TGase, with a Ki value in the low micromolar range (Table 1), although the inhibition is still weak compared with that of moenomycin. The Ki value is determined by using our recent reported FRET-based TGase assay.[27]
Table 1

Inhibition of Clostridium difficile TGase by Synthesized Iminosugars

compdinhibition (%)a (500 μM)inhibition (%) (100 μM)Ki (μM)
2b 
15 
17 
20500 
2110030 
11001006.3 ± 1.4c
Moe1001000.0015 ± 0.0001d

Inhibition percent calculated by comparing the reaction rate in the presence of the compound to the rate in the absence of any inhibitory compound.

— refers to no inhibition.

Shown are the mean values of the data generated from three independent experiments.

The data was adopted from ref (27).

Inhibition percent calculated by comparing the reaction rate in the presence of the compound to the rate in the absence of any inhibitory compound. — refers to no inhibition. Shown are the mean values of the data generated from three independent experiments. The data was adopted from ref (27).

Conclusions

A variety of imino-C-glycosides of α-d-GlcNAc-1-phosphate, 2, and 15, their l-ido analogue 17, and lipid-linked analogues 20, 21, and 1 were synthesized and evaluated for C. difficile TGase inhibition. The synthetic procedure provides easy access to diaminoheptenitol 6a and 6b, versatile iodo intermediates 7a and 7b, and aminoheptenitol 4 which has been reported via a less direct route[15] (eight steps starting from d-arabinofuranose). Our result demonstrated that the connection of iminosugar phosphonate 2 with a lipid chain via a pyrophosphate group results in a new design for generating active TGase inhibitors. Because the lipid part greatly contributes to TGase inhibition, optimization may offer even better TGase inhibitors. In addition, such a glycolipid could be further elaborated by enzymes such as N-acetylglucosamine transferase to increase the glycan length to better fit the donor site of TGase, which can accommodate a large substrate.[8] Further investigations based on these results are in progress. The efficient pyrophosphate coupling could also be used for the synthesis of analogues of UDP-GlcNAc, which could result in potential inhibitors of GlcNAc transferases such as OGT.[28]

Experimental Section

General

All chemicals were obtained from commercial sources and used without further purification. Anhydrous solvents were purchased and used without additional purification. TLC was performed on glass plates precoated with Silica Gel 60 F254 (0.25 mm, E. Merck); detection was executed by spraying with a solution of Ce(NH4)2(NO3)6 and (NH4)6Mo7O24 and subsequent heating on a hot plate. 1H and 13C NMR spectra were recorded on 500 and 600 MHz spectrometers. In 1H NMR spectra, chemical shifts were referenced to internal tetramethylsilane (δ 0.00 ppm in CDCl3), C6D5H (δ 7.16 ppm in C6D6), or HOD (δ 4.79 ppm in D2O). Chemical shifts are in ppm and are calibrated using the resonances of the carbon and the residual proton of the deuterated solvent. Proton peaks were assigned with the aid of 2D NMR techniques (1H1H COSY, HSQC, DEPT135, DEPT90, and HMBC). Mass spectra (MS) were recorded on an ESI-TOF mass spectrometer.

Measurement of the Percent Inhibition of TGase Inhibitors

HPLC analysis was performed on an anion-exchange column (4.6 mm × 25 mm, 5 μm, LC-SAZ1, Supelco Co.). A linear gradient of NH4OAc (from 20 mM to 1 M in MeOH) was eluted at a flow rate of 1.0 mL/min over 30 min. Inhibition assays were composed of buffer (1 μL, 0.85% decyl-PEG, 500 mM HEBES, 100 mM CaCl2, pH 8.0), DMSO/MeOH (1:1, 2.5 μL), NBD-lipid II (200 μM)/internal standard (4 μM) (2:3, 1 μL), inhibitors (1 μL, different concentrations ranging from 10 to 100 mM), TGase (CD) (1 μL, 25 μg/mL), and H2O (4.5 μL). After incubation at 37 °C for 2 h, reactions were stopped by addition of moenomycin A (1 μL, 100 μM). The reaction mixture was analyzed by HPLC analysis. The percent inhibition was calculated by the relative peak area of the remaining NDB-lipid II and NBD internal standard via integration.

Determination of Ki Values of Transglycosylase Inhibitors

The Ki values of 1 were determined using our recently reported FRET-based assays.[27] The reaction was performed and monitored as described above with various concentrations of FRET-based lipid II analogue (0–15 μM) in the presence of 0–40 μM 1. Initial velocity for each progression curve was calculated and used for Ki determination. The Ki value for 1 was determined with the competitive inhibition model using GraphPad Prism 5 (GraphPad Software Inc.). The data shown are the mean value from three independent experiments.

N-((3R,4R,5R)-4,5,7-Tris(benzyloxy)-6-hydroxyhept-1-en-3-yl)acetamide (4)

Under an atmosphere of argon in a three-necked flask equipped with a dropping funnel, dry THF (100 mL) was added to methyltriphenylphosphonium bromide (dried by heating at 150 °C at 0.01 mbar), forming a suspension that was cooled to 0 °C. nBuLi (2.2 M in hexanes, 103 mmol, 46 mL) was added dropwise over 15 min using the droping funnel, forming a red–orange solution. This was stirred for 10 min at 0 °C and 40 min at rt, forming a dark red solution. Then a suspension of 3 (20.3 mmol, 10.0 g) in dry THF (150 mL) was added over 10 min via dropping funnel at 0 °C. The mixture was stirred for 1 h at 0 °C, 12 h at rt, and 8 h under reflux when TLC monitoring [CH2Cl2/MeOH 20:1, R(3) = 0.27, R(4) = 0.39, cerium molybdate] showed full consumption of the starting material. Then, saturated aqueous solutions of ammonium chloride (250 mL) and diethyl ether (250 mL) were added followed by separation of the phases and extraction of the aqueous phase with diethyl ether (3 × 250 mL), separating large amounts of unreacted phosphonium salts. The combined organic extracts were dried over Na2SO4, and the solvent was removed in vacuo. Separation from side products SP1 and SP2 [(R(3) = 0.20, R(SP1) = 0.15, cerium molybdate, R(SP2) = 0.15, UV, toluene/MeOH 9:1] by column chromatography on silica gel (separation from SP2: 50 cm column, 1.500 g silica, toluene/MeOH 40:1; separation from SP1: 50 cm column, 500 g silica, hexanes/EtOAc 1:1) led to the isolation of 4 (5.97 g, 60%) as a colorless oil. Analytical data was in full accordance with the reported data. 1H NMR (CDCl3, 500 MHz) δ 1.89 (s, 3H, CH3), 2.96 (d, J = 5.6 Hz, 1 H), 3.60–3.57 (m, 3H), 3.82 (dd, J = 6.0, 2.0 Hz, 1H), 3.94–3.99 (m, 1H), 4.5–4.7 (m, 6 H, 3CH2Ph), 4.78–4.82 (m, 1H), 5.12 (d, J = 10.3 Hz, 1H, 1-H), 5.16 (d, J = 17.2 Hz, 1H, 1-H), 5.82 (ddd, J = 17.2, 10.4, 5.2 Hz, 1 H, 2-H), 6.15 (d, J = 8.6 Hz, 1H, NH), 7.12–7.34 (m, 15 H, Ar-H). 13C NMR (CDCl3, 125 MHz), δ 23.3 (CH3), 52.7 (C-3), 70.9 (t, C-7), 71.0, 73.4, 74.5, 75.1 (3 t, OCH2Ph), 80.4, 81.0, 115.5 (C-1), 125.3, 127.7, 128.8, 127.9, 128.0, 128.3, 128.4, 128.4, 128.5 (9 d, Ar), 129.1, 136.9 (C-2), 138.0, 138.3 (3 s, Ar), 169.7 (C=O). HRMS (ESI-TOF) calcd for C30H36NO5 (M + H)+, 490.2593; found, 490.2588.

N-((3R,4R,5R,6S)-6-Amino-4,5,7-tris(benzyloxy)hept-1-en-3-yl)acetamide (6a) and N-((3R,4S,5R,6R)-6-Amino-4,5,7-tris(benzyloxy)hept-1-en-3-yl)acetamide (6b)

Oxalyl chloride (12 mmol, 1.02 mL) was added at −78 °C to a solution of DMSO (16 mmol, 1.13 mL) in dry CH2Cl2 (20 mL) under an atmosphere of argon in a Schlenk flask. After 30 min of stirring, a solution of 4 (4.0 mmol, 1.96 g) in dry CH2Cl2 (8 mL) was added carefully via syringe over 10 min (note that precooling the cooled wall of the flask is necessary!). After 1 h of stirring at −78 °C, NEt3 (32 mmol, 4.44 mL) was added followed by 40 min of stirring at −78 °C. The solution was warmed to 0 °C within 10 min with an ice bath, and CH2Cl2 (20 mL) and a saturated aqueous solution of NaHCO3 (50 mL) were added followed by extraction of the aqueous phase with CH2Cl2 (3 × 40 mL). The combined organic extracts were dried over Na2SO4, and the solvent was removed in vacuo. A crude, instable intermediate was obtained as a yellow oil [CH2Cl2/MeOH 20:1, R(4) = 0.39, R(ketone) = 0.49, cerium molybdate]. Without purification, dry methanol (40 mL) was added to the reaction crude under an atmosphere of argon, and the resulting solution was treated with ammonium acetate (100%, 40 mmol, 3.08 g) and NaBH3CN (20 mmol, 1.30 g). After the resulting solution was stirred for 18 h at 50 °C, TLC monitoring [2 × CH2Cl2/MeOH 20:1, R(ketone) = 0.66, R(alcohol) = 0.58, R(6b) = 0.41, R(6a) = 0.34, cerium molybdate], saturated NaHCO3 (40 mL) was added to the reaction mixture followed by the removal of MeOH. The residual aqueous solution was extracted by CH2Cl2 (120 mL) twice. The collected organic phase was dried over MgSO4 and concentrated. NMR of the crude product showed a ratio of 6a/6b = 67:33. Purification by column chromatography on silica gel (196 g silica, CH2Cl2/MeOH 25:1) led to the isolation of 6a (836 mg, 42%) and 6b (411 mg, 22%) as colorless oils. For 6a, [α]D20 ≅ −36.3 (c 1.0, CH2Cl2). 1H NMR (600 MHz, CDCl3) δ 7.39–7.26 (m, 15H), 6.31 (d, J = 8.7 Hz, 1H, NHAc), 5.82 (ddd, J = 17.2, 10.4, 5.1 Hz, 1H, 2-H), 5.19–5.13 (m, 2H, 1-H), 4.81–4.76 (m, 2H, CH2Ph, 3-H), 4.72 (d, J = 10.8 Hz, 1H, CH2Ph), 4.60 (dd, J = 10.6 Hz, 2H, CH2Ph), 4.54 (s, 2H, CH2Ph), 3.88 (dd, J = 7.1, 1.7 Hz, 1H, 4-H), 3.66 (dd, J = 9.2, 5.2 Hz, 1H, 7-Ha), 3.60 (dd, J = 7.0, 5.1 Hz, 1H, 5-H), 3.50 (dd, J = 9.2, 6.1 Hz, 1H, 7-Hb), 3.24 (ddd, J = 5.6, 5.6, 5.3 Hz, 1H, 6-H), 1.99 (s, 3H, NHAc). 13C NMR (151 MHz, CDCl3) δ 169.5 (C=O), 138.5, 138.0, 137.9, 136.8 (C-2), 128.4, 128.3, 128.2, 127.9, 127.8, 127.7, 127.6, 127.4, 115.2 (C-1), 82.7 (C-5), 81.4 (C-4), 74.9, 73.2, 72.1 (C-7), 52.2 (C-6), 52.1 (C-3), 23.3 (CH3). HRMS (ESI-TOF) calcd for C30H37N2O4 (M + H)+, 489.2753; found, 489.2748. For 6b, [α]D20 ≅ −43.8 (c 1.0, CH2Cl2). 1H NMR (CDCl3, 500 MHz) δ 2.07 (s, 3H, CH3), 3.23 (dd, J = 6.8, 6.8 Hz, 1H), 3.43 (dd, J = 7.6, 7.6 Hz, 1H), 3.54 (dd, J = 8.4, 6.5 Hz, 1H), 3.71 (d, J = 8.4 Hz, 1H), 4.06 (d, J = 8.4 Hz, 1H), 4.5–4.6 (m, 3H), 4.74 (d, J = 10.6 Hz, 1H, CH2Ph), 4.78 (d, J = 10.6 Hz, 1 H, CH2Ph), 4.86–4.91 (m, 2H), 5.27–5.37 (m, 2H, 1-H), 6.04 (ddd, J = 15.1, 10.5, 3.8 Hz, 1H, 2-H), 7.05 (d, J = 8.3 Hz, 1 H, NH), 7.30–7.43 (m, 15 H, Ar-H). 13C NMR (CDCl3, 125 MHz), δ 23.6 (CH3), 51.2, 51.8 (2 CNHR), 73.1, 73.5, 74.9, 75.4 (4 t, OCH2Ph, C-7), 80.4, 83.1, 115.6 (C-1), 127.7, 127.7, 127.8, 127.8, 128.0, 128.3, 128.4, 128.5, 128.54, 128.56 (9 d, Ar), 135.8 (C-2), 138.2, 138.3, 138.7 (3 s, Ar), 169.8 (C=O). HRMS (ESI-TOF) calcd for C30H37N2O4 (M + H)+, 489.2753; found, 489.2758.

N-((2S,3S,4R,5R,6R)-4,5-Bis(benzyloxy)-6-(benzyloxymethyl)-2-(iodomethyl)piperidin-3-yl)acetamide (7a)

Under an atmosphere of argon in the dark, N-iodosuccinimide (0.65 mmol, 147 mg) was added in one portion at rt to a solution of 6a (0.65 mmol, 320 mg) in dry CH2Cl2 (20 mL). The resulting solution was stirred at rt for 2 h (TLC monitoring, CH2Cl2/MeOH 20:1, R(6a) = 0.25, R(7a) = 0.60, cerium molybdate]. Then, a saturated aqueous solution of sodium thiosulfate (10 mL) was added followed by extraction with CH2Cl2 (3 × 20 mL). The combined organic extracts were dried over MgSO4, and the solvent was removed in vacuo. Purification by silica gel chromatography (CH2Cl2/MeOH 100:1) gave 7a (168 mg, 50%) as a white solid. [α]D20 ≅ +20.5 (c 0.4, CH2Cl2). 1H NMR (CDCl3, 600 MHz) δ 1.82 (s, 3H, CH3), 2.99 (t, J = 10.2 Hz, 1H, 1-Ha), 3.20 (dd, J = 10.2, 3.3 Hz, 1H, 1-Hb), 3.36–3.40 (m, 2H, 2-H and 7-Ha), 3.43 (m, 1H, 5-H), 3.47 (m, 1H, 6-H), 3.56 (m, 1H, 4-H), 3.82 (dd, J = 9.4, 4.9 Hz, 1H, 7-Hb), 4.33 (m, 1H, 3-H), 4.41–4.45 (t, 2H, CH2Ph), 4.60–4.49 (m, 4H, CH2Ph), 6.61 (d, J = 9.1 Hz, 1 H, NH), 7.19–7.33 (m, 15 H, Ar-H). 13C NMR (CDCl3, 150 MHz) 9.8 (CH2I), 23.3 (CH3), 48.9 (C-3), 49.8 (C-2), 56.0 (C-6), 68.0 (C-7), 72.0, 72.1, 73.4 (OCH2Ph), 74.5 (C-5), 75.4 (C-4), 138.0, 137.5, 137.3, 128.5, 128.5, 128.4, 128.0, 127.9, 127.8, 127.7, 127.7, 127.5 (Ar), 137.3, 137.5, 138.0 (Ar), 170.0 (C=O). HRMS (ESI-TOF) calcd for C30H36IN2O4 (M + H)+, 615.1714; found, 615.1686.

N-((2S,3S,4R,5R,6R)-4,5-Bis(benzyloxy)-6-((benzyloxy)methyl)-2-(hydroxymethyl)piperidin-3-yl)acetamide(8) and (4aS,6R,7R,8R,8aS)-7,8-Bis(benzyloxy)-6-((benzyloxy)methyl)-2-methyl-4a,5,6,7,8,8a-hexahydro-4H-pyrido[3,2-d][1,3]oxazine (9)

A solution of 7a (0.33 mmol, 200 mg) in THF/H2O 1:1 (44 mL) was treated with Ag(OAc) (0.9 mmol, 150 mg) and stirred at rt for 30 min followed by the addition of AcOH (200 μL). After 3 h (TLC monitoring, CH2Cl2/MeOH 20:1, R(8) = 0.38, R(9) = 0.5, cerium molybdate], the mixture was filtered, and the solvent was removed in vacuo. Dichloromethane (100 mL) was added to the residue, which was washed with saturated aqueous NaHCO3. The collected organic phase was dried by MgSO4 and concentrated in vacuo. Purification by column chromatography on silica gel (CH2Cl2/MeOH/Et3N 30:1:0.3) led to the isolation of 8 (96.5 mg, 58%) and 9 (41.7 mg, 26%) as white solid and colorless oil, respectively.

Compound 8

1H NMR (600 MHz, CDCl3) δ 7.38–7.14 (m, 15H), 6.98 (d, J = 7.3 Hz, 1H, NHAc), 4.60 (m, 2H, CH2Ph), 4.51–4.40 (m, 4H, CH2Ph), 4.21 (m, 1H, 3-H), 3.95 (d, J = 6.2 Hz, 1H, OH), 3.81 (t, J = 8.9 Hz, 1H, 7-Ha), 3.63 (m, 1H, 4-H), 3.58 (m, 1H, 5-H), 3.48 (dd, J = 9.4, 5.9 Hz, 1H, 7-Hb), 3.42–3.35 (m, 2H, 6-H, 1-Hb), 3.28–3.24 (m, 1H, 2-H), 3.23–3.18 (m, 1H, 1-Ha), 1.86 (s, 3H). 13C NMR (151 MHz, CDCl3) δ 171.4, 138.1, 137.5, 137.2, 128.7, 128.5, 128.4, 128.2, 127.9, 127.9, 127.7, 127.4, 74.6 (C-4), 74.5 (C-5), 73.3, 72.2, 71.9 (OCH2Ph), 68.4 (C-7), 62.2 (C-1), 55.0 (C-6), 48.9 (C-2), 46.2 (C-3), 23.2 (CH3). HRMS (ESI-TOF) calcd for C30H37N2O5 (M + H)+, 505.2697; found, 505.2698.

Corrected 1H NMR Values for Compound 9 (Lorentz-to-Gauss Transformed Spectra)

Compound 9

1H NMR (600 MHz, CDCl3) δ 7.41–7.07 (m, 15H, Ar-H), 4.87 (dd, J = 10.7, 6.4 Hz, 2H, CH2Ph), 4.73 (d, J = 10.7 Hz, 1H, CH2Ph), 4.53 (ddd, J = 10.9, 10.4, 5.1 Hz, 1H, 2-H), 4.48–4.41 (m, 2H, CH2Ph), 4.36 (d, J = 10.8 Hz, 1H), 4.29 (ddd, J = 10.4, 9.5, 1.2 Hz, 1H, 3-H), 3.79 (dd, J = 9.0, 3.0 Hz, 1H, 7-Ha), 3.61 (dd, J = 9.5, 9.3 Hz, 1H, 4-H), 3.38 (dd, J = 9.0, 8.1 Hz, 1H, 7-Hb), 3.25 (dd, J = 13.6, 5.1 Hz, 1H, 1-Ha), 3.19 (dd, J = 9.3, 9.2 Hz, 1H, 5-H), 2.94 (ddd, J = 9.2, 8.1, 3.0 Hz, 1H, 6-H), 2.58 (dd, J = 13.6, 10.9 Hz, 1H, 1-Hb), 1.94 (d, J = 1.2 Hz, 3H). 13C NMR (CDCl3, 150 MHz) δ 164.31(C=O), 138.98, 138.25, 137.86, 128.46, 128.29, 128.13, 127.97, 127.96, 127.83, 127.58, 127.28 (Ar), 84.53 (C-4), 82.52 (C-5), 79.84 (C-2), 75.88, 75.50, 73.38 (OCH2Ph), 72.18 (C-3), 71.50 (C-7), 63.30 (C-6), 47.90 (CH2O), 14.02 (CH3). HRMS (ESI-TOF) calcd for C30H35N2O4 (M + H)+, 487.2591; found, 487.2616.

Dibenzyl(((2S,3S,4R,5R,6R)-3-acetamido-4,5-bis(benzyloxy)-6-((benzyloxy)methyl)piperidin-2-yl)methyl)phosphonate (10)

To a stirring solution of dibenzyl phosphate (111 μL, 0.48 mmol) in dry DMF (2.5 mL) was added molecular sieve MS 4Å (150 mg), and the mixture was stirred for 30 min at rt. NaHMDS (2 M solution in THF, 230 μL, 0.46 mmol) was then added. After 1 h, compound 7a (51 mg, 0.08 mmol) in dry DMF (1.5 mL) was added to the reaction mixture at rt, and the mixture was stirred for another 24 h (R (10) = 0.38, UV, EtOAc/Hex 4:1). The reaction mixture was concentrated to remove DMF and purified by silica gel chromatography (CH2Cl2/MeOH 100:1 to 10:2, 5.0 g silica) to afford 10 (24.8 mg, 40%) as a white solid. 1H NMR (600 MHz, CDCl3) δ 7.33–7.18 (m, 25H), 6.60 (d, J = 8.2 Hz, 1H, NHAc), 4.97 (m, CH2Ph, 2H), 4.92–4.87 (m, CH2Ph, 2H), 4.56 (d, J = 11.8 Hz, CH2Ph, 1H), 4.52 (d, J = 11.5 Hz, CH2Ph, 1H), 4.45–4.40 (m, CH2Ph, 2H), 4.34 (d, J = 11.9 Hz, CH2Ph 1H), 4.10 (brd, J = 9.4 Hz, 1H, 3-H), 3.71–3.63 (m, 2H, 7-Ha and 2-H), 3.57 (m, 1H, 4-H), 3.53–3.47 (m, 2H, 7-Hb and 5-H), 3.32 (m, 6-H), 1.94–1.87 (m, 1H, 1-Ha), 1.84–1.75 (m, 4H, COCH3 and 1-Hb). 13C NMR (151 MHz, CDCl3) δ 169.95 (C=O), 138.3, 137.7, 137.5, 136.2, 136.2, 136.2, 128.5, 128.5, 128.4, 128.4, 128.3, 128.3, 127.9, 127.8, 127.8, 127.6, 127.5, 75.4 (C-4), 74.1 (C-5), 73.2, 72.1, 68.8 (C-7), 67.2, 67.2, 67.2, 67.2 (dd, Jc,p = 4.2 Hz, 2C, POCH2Ph), 55.4 (C-6), 49.8, 49.7 (d, Jc,p = 16.2 Hz, C-3), 43.6 (C-2), 29.3, 28.4 (d, Jc,p = 140.4 Hz, C-1), 23.3 (CH3). 31P NMR (CDCl3, 202 MHz) δ 31.9. HRMS (ESI-TOF) calcd for C44H49N2O7P (M + H)+, 749.3350; found, 749.3360.

(((2S,3S,4R,5R,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)piperidin-2yl)methyl) phosphonic acid (2)

To a round-bottomed flask contained starting material 10 (20 mg, 0.027 mmol) were added THF (2.5 mL), H2O (2.5 mL), and AcOH (50 μL). The solution was treated with Pd/C (10%, Degussa type, 26.0 mg) under a hydrogen atmosphere and stirred at rt for 18 h. The mixture was filtered, and the solvent was removed in vacuo. Purification by biogel P2 chromatography (eluted by water) led to the isolation of 2 (7.2 mg, 90%) as a white solid after lyophilization. 1H NMR (600 MHz, D2O) δ 4.10 (brd, J = 6.8 Hz, 1H, 3-H), 3.91–3.75 (m, 3H, 7-Ha, 7-Hb, 2-H), 3.68 (t, J = 9.5 Hz, 1H, 4-H), 3.56 (t, J = 9.0 Hz, 1H, 5-H), 3.22 (d, J = 8.2 Hz, 1H, 6-H), 2.01 (s, 3H), 1.79 (m, 1H, 1-Ha), 1.66 (m, 1H, 1-Hb). 13C NMR (151 MHz, D2O) δ 176.9 (C=O), 71.9 (C-4), 71.6 (C-5), 60.4 (C-7), 56.3 (C-6), 53.9 (C-2), 53.7–53.6 (C-3, Jc,p = 28.9 Hz), 24.3. 31P NMR (D2O, 202 MHz) δ 19.7 (brs). HRMS (ESI-TOF) calcd for C9H19N2O7P (M – H)−, 297.0846; found, 297.0860.

N-((2R,3S,4R,5R,6R)-2-(Azidomethyl)-4,5-bis(benzyloxy)-6-((benzyloxy)methyl)piperidin-3-yl)acetamide (12)

To a stirred solution of iodo compound 7a (58 mg, 0.094 mmol) in dry DMF (6 mL) was added NaN3 (12.2 mg, 0.188 mmol). The reaction mixture was heated at 80 °C and reacted for 8 h. After the disappearance of 7a (toluene/EtOAc 3:2, R = 0.25, cerium molybdate) on TLC, the reaction mixture was cooled to rt. CH2Cl2 (10 mL) was added, and the mixture was washed twice with water (5 mL), dried with MgSO4, and concentrated. The crude residue was purified by flash silica gel column chromatography (toluene/EtOAc 7:3) to afford compound 12 (32.3 mg, 65%) as colorless oil. 1H NMR (600 MHz, CDCl3) δ 7.40–7.31 (m, 11H), 7.29 (m, 2H), 7.25–7.22 (m, 2H), 6.68 (d, J = 9.1 Hz, 1H), 4.61 (t, J = 12.0 Hz, 2H), 4.55 (q, J = 12.0 Hz, 2H), 4.48 (t, J = 11.3 Hz, 2H), 4.22 (m, 1H, 3-H), 3.88 (t, J = 8.6 Hz, 1H), 3.63 (t, J = 3.0 Hz, 1H), 3.54 (td, J = 8.9, 3.3 Hz, 1H), 3.50 (dd, J = 12.2, 3.8 Hz, 1H), 3.48–3.42 (m, 2H), 3.34–3.31 (m, 1H), 3.17 (dd, J = 12.1, 9.5 Hz, 1H), 1.86 (s, 3H). 13C NMR (151 MHz, CDCl3) δ 169.9, 138.1, 137.5, 137.3, 128.5, 128.5, 128.4, 128.0, 127.8, 127.8, 127.7, 127.5, 75.0, 74.4, 73.3, 72.0, 67.9, 55.4, 53.6, 47.2, 23.3. HRMS (ESI-TOF) calcd for C30H35N5O4 (M + H)+, 530.2762; found, 530.2776.

Benzyl(2S,3S,4R,5R,6R)-3-acetamido-4,5-bis(benzyloxy)-6-((benzyloxy)methyl)-2-(hydroxymethyl)piperidine-1-carboxylate (13)

A solution of compound 8 (220 mg, 0.44 mmol) in dioxane/H2O (3:2, 25 mL) was treated with NaHCO3 (361 mg, 4.40 mmol) and CbzCl (503 μL, 3.52 mmol) at 0 °C. After stirring at rt for 4 h, the reaction mixture was diluted with CH2Cl2 (30 mL) and washed with water (15 mL) and brine (15 mL) sequentially. The organic layer was dried with MgSO4 and concentrated, and the residue was purified by flash silica gel column chromatography (EtOAc/hexane 55:45 to 70:30) to afford 13 (347 mg, 92%) as a viscous oil. 1H NMR (600 MHz, C6D6, 45 °C) δ 7.38–7.07 (m, 20H, Ar-H), 6.61 (d, J = 9.1 Hz, 1H, NH), 5.26 (m, 1H, 6-H), 5.21 (d, J = 11.9 Hz, 1H, 7-Ha), 5.05 (d, J = 9.8 Hz, 1H, 7-Hb), 4.92 (ddd, J = 9.2, 2.3, 2.3 Hz, 1H, 3-H), 4.57 (m, 1H, 1-Ha), 4.5–4.49 (m, 2H, 1-Hb, CH2Ph), 4.46 (d, J = 11.9 Hz, 1H, CH2Ph), 4.43–4.37 (m, 2H, CH2Ph), 4.31 (d, J = 11.9 Hz, 1H, CH2Ph), 4.17 (d, J = 11.3 Hz, 1H, CH2Ph), 4.14–4.11 (ddd, J = 8.0, 6.0, 2.3 Hz, 1H, 1-H), 4.04 (t, J = 7.1 Hz, 1H, OH), 3.84 (p, J = 9.5 Hz, 3H, 5-H, CH2Ph), 3.74 (m, 1H, 4-H), 1.62 (s, 3H, CH3). 13C NMR (151 MHz, C6D6, 45 °C) δ 169.9 (C=O), 156.6 (C=O), 138.6, 137.8, 137.7, 137.0, 128.4, 128.4, 128.4, 128.3, 128.1, 128.0, 127.9, 127.7, 127.6 (Ar), 76.4 (C-4), 74.6 (C-5), 73.0, 71.6, 71.3, 67.9 (OCH2Ph), 67.0 (C-7), 61.4 (C-1), 55.7 (C-6), 55.0 (C-2), 46.8 (C-3), 22.3 (CH3). HRMS (ESI-TOF) calcd for C38H42N2O7 (M + H)+, 639.3065; found, 639.3084.

Benzyl(2S,3S,4R,5R,6R)-3-acetamido-4,5-bis(benzyloxy)-6-((benzyloxy)methyl)-2-(((bis(benzyloxy)phosphoryl)oxy)methyl)piperidine-1-carboxylate (14)

To a stirred solution of 13 (16 mg, 0.03 mmol) and tetrazole (9.7 mg, 0.14 mmol) in MeCN (2 mL) at 0 °C was slowly added bis(benzyloxy)(diisopropylamino)phosphane (40 μL, 0.125 mmol) followed by removal of the ice bath. When the TLC analysis showed consumption of the starting material, the reaction mixture was cooled to 0 °C followed by the addition of mCPBA (75%, 9.3 mg, 0.032 mmol). The ice bath was removed, and the reaction mixture was heated to rt. After 1 h, the reaction was quenched by saturated NaHCO3 (1.5 mL). The organic phase was collected. The aqueous phase was extracted with CH2Cl2 (10 mL) three times. The combined organic phase was dried over MgSO4, filtered, and concentrated. The reside was purified by silica gel chromatography (EtOAc/hexanes 55:45) to yield compound 14 (21.3 mg, 79% over two steps) as a colorless liquid. 1H NMR (600 MHz, C6D6, 45 °C) δ 7.37–7.06 (m, 35H), 6.91 (brs, 1H, NHAc), 5.08–5.04 (m, 10H), 4.55 (brs, 2H), 4.43 (m, 4H), 4.22 (d, J = 11.5 Hz, 1H), 4.02–3.85 (m, 4H), 1.79 (brs, 3H, CH3). 13C NMR (151 MHz, CDCl3) δ 170.0 (NHCOCH3), 156.4 (NHCOOBn), 138.0, 137.5, 137.3, 136.2, 135.8, 135.7, 135.7, 128.5, 128.4, 128.3, 128.1, 127.9, 127.9, 127.9, 127.8, 127.6, 127.5, 74.3, 73.0, 71.8, 71.2, 69.3, 67.9, 67.5, 52.3, 47.7, 23.0 (NHCOCH3). 31P NMR (CDCl3, 202 MHz) δ 0.32. HRMS (ESI-TOF) calcd for C52H55N2O10P (M + H)+, 899.3667; found, 899.3692.

((2S,3S,4R,5R,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)piperidin-2-yl)methyl Dihydrogen Phosphate (15)

To a round-bottomed flask containing starting material 14 (20 mg) were added THF (2.5 mL), H2O (2.5 mL), and AcOH (50 μL). The solution was treated with Pd/C (10%, Degussa type, 26.0 mg) under a hydrogen atmosphere and stirred at rt for 18 h. The mixture was filtered through a pad of Celite, and the solvent was removed in vacuo. Purification by P2 led to the isolation of 15 (6.5 mg, 91%) as a colorless solid. 1H NMR (600 MHz, D2O) δ 4.07 (m, 2H, 3-H and 1-Ha), 3.97 (m, 1H, 1-Hb), 3.88 (m, 2H, 4-H and 7-Ha), 3.76 (d, J = 12.3 Hz, 1H, 7-Hb), 3.61 (m, 1H, 2-H), 3.42 (m, 2H, 5-H and 6-H), 1.98 (s, 3H, CH3). 13C NMR (151 MHz, D2O) δ 174.6 (C=O), 71.0 (C-4), 70.1 (C-5), 60.1 (C-1), 58.8 (C-7), 55.7 (C-6), 53.9 (C-2), 50.9 (C-3), 21.8 (CH3). 31P NMR (D2O, 202 MHz) δ 3.3. HRMS (ESI-TOF) calcd for C9H19N2O8P (M – H)−, 313.0795; found, 313.0808.

N-((2S,3S,4R,5R,6S)-4,5-Bis(benzyloxy)-6-(benzyloxymethyl)-2(iodomethyl)piperidinyl) Acetamide (7b)

Under an atmosphere of argon in the dark, N-iodosuccinimide (0.38 mmol, 85.5 mg) was added in one portion at 0 °C to a solution of 6b (0.3 mmol, 147 mg) in dry CH2Cl2 (10 mL). The resulting solution was stirred at 0 °C for 2 h until TLC monitoring [CH2Cl2/MeOH 20:1, R(6b) = 0.38, R(7b) = 0.67, cerium molybdate] showed full consumption of the starting material. Then, a saturated aqueous solution of sodium thiosulfate (15 mL) and a saturated aqueous solution of Na2CO3 (15 mL) were added followed by extraction with CH2Cl2 (3 × 20 mL). The combined organic extracts were dried over Na2SO4, and the solvent was removed in vacuo. Purification by column chromatography on silica gel (20 g silica, CH2Cl2/MeOH 99:1) led to the isolation of 7b (132 mg, 72%) as a colorless oil. [α]D20 ≅ +25.9 (c 1.0, CH2Cl2). 1H NMR (CDCl3, 500 MHz) δ 1.79 (s, 3H, CH3), 3.04 (dd, J = 10.9 Hz, J = 10.9 Hz, 1H, 1-Ha), 3.31 (dd, J = 10.7 Hz, J = 3.5 Hz, 1H, 1-Hb), 3.29–3.33 (m, 1H, 2-H), 3.37 (ddd, J = 8.5 Hz, J = 4.7 Hz, 2.1 Hz, 1H, 6-H), 3.43 (dd, J = 3.2 Hz, J = 2.1 Hz, 1H, 5-H), 3.53 (dd, J = 9.0 Hz, J = 4.7 Hz, 1H, 7-Ha), 3.60 (dd, J = 3.1 Hz, J = 3.1 Hz, 1H, H-4), 3.63 (dd, J = 9.0 Hz, J = 9.0 Hz, 1H, 7-Hb), 4.37 (d, J = 11.2 Hz, 1H, CH2Ph), 4.42 (d, J = 11.2 Hz, 1H, CH2Ph), 4.46 (ddd, J = 9.7 Hz, J = 3.2 Hz, 2.7 Hz, 1H, 3-H), 4.49 (d, J = 11.9 Hz, 2H, CH2Ph), 4.59 (d, J = 11.8 Hz, 1H, CH2Ph), 4.68 (d, J = 11.8 Hz, 1H, CH2Ph), 6.68 (d, J = 9.7 Hz, 1H, NH), 7.17–7.40 (m, 15H, Ar-H). 13C NMR (CDCl3, 125 MHz) δ 9.6 (t, CH2I), 23.4 (CH3), 48.8 (C-3), 55.5 (C-6), 55.9 (C-2), 71.0 (C-7), 71.8, 73.06, 73.4 (3 t, OCH2Ph), 73.5 (C-5), 75.1 (C-4), 127.7, 127.8, 127.8, 128.0, 128.4, 128.4, 128.5, 128.6, 128.7 (9 d, Ar), 137.2, 137.7, 138.1 (3 s, Ar), 170.0 (C=O). HRMS (ESI-TOF) calcd for C30H36IN2O4 (M + H)+, 615.1714; found, 615.1716.

Dibenzyl((2S,3S,4R,5R,6S)-3-acetamido-4,5-bis(benzyloxy)-6-(benzyloxymethyl) piperidin-2-yl)methylphosphonate (16)

Under an atmosphere of argon and strictly dry conditions, Cs2CO3 (0.6 mmol, 195 mg) was added to a solution of freshly distilled dibenzyl phosphite (0.9 mmol, 237 mg) in dry DMF (1.5 mL). After 1 h of stirring at rt, 7b (0.147 mmol, 90 mg) was added, and the resulting solution was stirred for 12 h in the dark until TLC monitoring [CH2Cl2/MeOH 20:1, R(7b) = 0.64, R(16) = 0.39, cerium molybdate] showed full consumption of the starting material. Then, the solvent was removed in vacuo. Purification by column chromatography on silica gel (20 g silica, CH2Cl2/MeOH 98:2) led to the isolation of 16 (49 mg, 45%) as a colorless oil. 1H NMR (CDCl3, 500 MHz) δ 1.77 (s, 3H, CH3), 3.29–3.34 (m, 1H), 3.39–3.53 (m, 4H), 3.60 (dd, J = 4.9, 2.7 Hz, 1H), 4.19 (d, J = 9.7 Hz, 1H), 4.34 (d, J = 11.2 Hz, 1H), 4.38 (d, J = 12.8 Hz, 1H), 4.42 (d, J = 12.4 Hz, 1H), 4.51 (d, J = 11.9 Hz, 1H), 4.62 (d, J = 11.9 Hz, 1H), 4.88–5.02 (m, 4 H), 6.71 (d, J = 10.0 Hz, 1H, NH), 7.15–7.35 (m, 25H, Ar-H). 13C NMR (CDCl3, 100 MHz) δ 23.4 (CH3), 49.2, 49.4, 49.6 (3 CNHR), 55.0, 67.2, 67.3, 67.43, 67.49, 70.5, 71.6, 73.0, 73.2, 73.4, 74.4, 127.6, 127.7, 127.8, 127.9, 128.0, 128.0, 128.3, 128.3, 128.4, 128.4, 128.4, 128.5, 128.62, 128.65, 128.65 (15 d, Ar), 136.2, 136.3, 137.4, 137.8, 138.1 (5 s, Ar), 169.9 (C=O). 31P NMR (CDCl3, 400 MHz) δ 32.4. HRMS (ESI-TOF) calcd for C44H50N2O7P (M + H)+, 749.3350; found, 749.3337.

((2S,3S,4R,5R,6S)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)piperidin-2-yl)methylphosphonic Acid (17)

A solution of 16 (0.059 mmol, 37 mg) in MeOH (2 mL) was treated with Pd/C (10%, Degussa type, 5.3 mg) and stirred at rt for 3 d under a hydrogen atmosphere. The mixture was filtered, and the solvent was removed in vacuo. Purification by column chromatography on RP silica gel (mini column, 2 g RP silica, eluent: H2O) led to the isolation of l-ido-17 (6.8 mg, 47%) as a colorless solid. 1H NMR (600 MHz, D2O) δ 4.31 (m, 1H, 3-H), 4.04–4.02 (m, 2H, 4-H and 5-H), 3.96–3.90 (m, 1H, 2-H), 3.88 (dd, J = 12.1, 4.5 Hz, 1H, 7-Ha), 3.85–3.79 (m, 1H, 7-Hb), 3.69 (dd, J = 9.8, 3.3 Hz, 1H, 6-H), 2.06 (s, 3H, NHAc), 1.91–1.83 (m, 2H, 1H), 1.35 (d, J = 13.7 Hz, 1H). 13C NMR (151 MHz, D2O) δ 173.9 (C=O), 67.2(C4), 65.9 (C5), 59.0 (C7), 57.0 (C6), 51.6 (C2, Jc,p = 2.6 Hz), 51.0, 50.9 (C-3, Jc,p = 13.6 Hz), 27.4, 26.5 (C-1, Jc,p = 129.1 Hz), 24.6, 22.2 (CH3). 31P NMR (202 MHz, D2O) δ −19.01. HRMS (ESI-TOF) calcd for C9H20N2O7P (M + H)+, 299.1003; found, 299.1006.

(((2S,3S,4R,5R,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)piperidin-2-yl)methyl)phosphoric ((2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl phosphoric) Anhydride (20)

A round-bottomed flask containing lipid phosphate 18 (17 mg, 0.051 mmol) was dried in vacuo for 1 h. Anhydrous DMF (1 mL) was then added to the flask followed by the addition of CDI (32.8 mg, 0.203 mmol). The resulting solution was kept stirring for 3 h. MeOH (30 μL) was added to quench the extra CDI for 1.5 h. The reaction residue was then transferred to a vial containing compound 15 (5.3 mg, 0.016 mmol) followed by the addition of tetrazole solution in dry DMF (10 mg/mL, 0.041 mmol). The reaction was kept stirring for 48 h. The mixture was transferred to a round-bottomed flask, and the vial was washed with MeOH (1 mL) three times. The solvent was removed in vacuo and purified by silica gel chromatography (CHCl3/MeOH/NH4OH 7:3:0.5 to MeOH/H2O 1:1). The collected fractions containing product with 90% purity were concentrated and further purified by HPLC (20 mM NH4HCO3/MeCN) to afford compound 20 (6.7 mg, 70%) as a white solid after lyophilization. 1H NMR (600 MHz, D2O) δ 5.47 (td, J = 7.1, 1.0 Hz, lipid-C=CHCH2O, 1H), 5.25–5.15 (m, 2 × C=CH, 2H), 4.50 (m, lipid-C=CHCH2O, 2H), 4.25–4.20 (m, 1H, 1-Ha), 4.08 (dt, J = 10.9, 3.8 Hz, 1H, 1-Hb), 4.01 (dd, J = 10.9, 6.1 Hz, 1H, 3-H), 3.90 (dd, J = 11.6, 2.9 Hz, 1H, 7-Ha), 3.85 (dd, J = 10.8, 9.0 Hz, 1H, 4-H), 3.60 (dd, J = 11.7, 6.6 Hz, 1H, 7-Hb), 3.38 (m, 1H, 2-H), 3.27 (t, J = 9.5 Hz, 1H, 5-H), 3.12–3.07 (m, 1H, 6-H), 2.20–2.09 (m, 3 × lipid-CH2, 6H), 2.07 (s, NHAc, 3H), 2.04 (m, lipid-CH2, 2H), 1.73 (s, lipid-CH3, 3H), 1.70 (s, lipid-CH3, 3H), 1.64 (s, 2 × lipid-CH3, 6H). 13C NMR (151 MHz, D2O) δ 174.5 (C=O), 160.2 (NH4HCO3), 143.0, 136.6, 133.4 (lipid CH3CH2C=CH), 124.4, 124.2 (2 X C=CH), 119.4, 119.3 (lipid-C=CHCH2O), 72.6 (C-5), 72.0 (C-4), 64.0, 63.9 (C-1), 63.0, 63.03 (lipid-C=CHCH2O), 61.8 (C-7), 55.1 (C-6), 53.2, 53.1 (C-2), 52.8 (C-3), 38.7, 38.7, 25.7, 25.5 (4C, lipid-CH2), 24.8 (lipid-CH3), 21.9 (NHCOCH3), 16.9 (lipid-CH3), 15.6 (lipid-CH3), 15.2 (lipid-CH3). 31P NMR (202 MHz, D2O) δ −10.91 (d, J = 21.7 Hz), −11.51 (d, J = 21.8 Hz). HRMS (ESI-TOF) calcd for C24H44N2O11P2 (M – H)−, 597.2337; found, 597.2337.

(((2S,3S,4R,5R,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)piperidin-2-yl)methyl)phosphonic((2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl phosphoric) Anhydride (21)

A round-bottomed flask containing lipid phosphate 18 (13.6 mg, 0.041 mmol) was dried in vacuo for 1 h. Anhydrous DMF (1 mL) was then added to the flask followed by the addition of CDI (26.2 mg, 0.163 mmol). The resulting solution was kept stirring for 3 h. MeOH (25 μL) was added to quench the extra CDI for 1.5 h. The reaction residue was then transferred to a vial containing compound 2 (4.1 mg, 0.014 mmol). The reaction was completed when the reaction mixture turned from cloudy to clear after 48 h of stirring. The mixture was transferred to a round-bottomed flask, and the vial was washed with MeOH (1 mL) three times. The solvent was removed in vacuo and purified by silica gel chromatography (CHCl3/MeOH/NH4OH 7:3:0.5 to MeOH/H2O 1:1). The collected fractions containing product with 90% purity were concentrated and further purified by HPLC (20 mM NH4HCO3/MeCN) to afford compound 20 (5.0 mg, 62%) as a white solid after lyophilization. 1H NMR (600 MHz, D2O) δ 5.47 (brt, J = 6.3 Hz, lipid-C=CHCH2O,1H), 5.26–5.17 (m, 2 × C=CH, 2H), 4.48 (t, J = 6.8 Hz, lipid-C=CHCH2O, 2H), 3.99 (brd, J = 7.1 Hz, 1H, 3-H), 3.93 (dd, J = 12.0, 2.8 Hz, 1H, 7-Ha), 3.63 (m, 3H, 7-Hb, 2-H, 4-H), 3.32 (t, J = 9.1 Hz, 1H, 5-H), 3.04 (brs, 1H, 6-H), 2.21–1.92 (m, lipid-CH2, NHAc, 1-H, 13H), 1.74 (s, lipid-CH3, 3H), 1.70 (s, lipid-CH3, 3H), 1.64 (s, lipid-CH3, 6H). 13C NMR (151 MHz, D2O) δ 174.3 (C=O), 160.2 (NH4HCO3), 143.1, 136.6, 133.5 (lipid-CH3C=CH), 124.4, 124.2 (2 × C=CH), 119.4, 119.3 (lipid-C=CHCH2O), 72.4 (C-5), 71.1 (C-4), 62.9, 62.8 (lipid-C=CHCH2O), 61.7 (C-7), 54.1 (C-6), 53.3 (C-3), 50.3, 50.3 (C-2), 38.7, 38.7, 25.7, 25.5 (4C, lipid-CH2), 24.8 (lipid-CH3), 24.5, 23.6 (C-1), 22.0 (NHCOCH3), 16.9 (lipid-CH3), 15.6 (lipid-CH3), 15.2 (lipid-CH3). 31P NMR (202 MHz, D2O) δ 14.27 (d, J = 23.7 Hz), −10.71 (d, J = 26.3 Hz). HRMS (ESI-TOF) calcd for C24H44N2O10P2 (M – H)−, 581.2387; found, 581.2373.

(((2S,3S,4R,5R,6R)-3-Acetamido-4,5-dihydroxy-6-(hydroxymethyl)piperidin-2-yl)methyl)phosphonic((2Z,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl phosphoric) Anhydride (1)

A round-bottomed flask containing lipid phosphate 19 (13.3 mg, 0.036 mmol) was dried in vacuo for 1 h. Anhydrous DMF (1 mL) was then added to the flask followed by the addition of CDI (23.3 mg, 0.144 mmol). The resulting solution was kept stirring for 3 h. MeOH (25 μL) was added to quench the extra CDI for 1.5 h. The reaction residue was then transferred to a vial containing compound 2 (3.6 mg, 0.012 mmol). The reaction was completed when the reaction mixture turned from cloudy to clear after 48 h of stirring. The mixture was transferred to a round-bottomed flask, and the vial was washed with MeOH (1 mL) three times. The solvent was removed in vacuo and purified by silica gel chromatography (CHCl3/MeOH/NH4OH 7:3:0.5 to MeOH/H2O 1:1). The collected fractions containing product with 90% purity were concentrated and further purified by HPLC (20 mM NH4HCO3/MeCN) to afford compound 1 (4.3 mg, 56%) as a white solid after lyophilization. 1H NMR (600 MHz, D2O) δ 5.38 (m, lipid-C=CHCH2O, 1H), 5.13 (m, 2 × C=CH, 3H), 4.39 (t, J = 6.6 Hz, lipid-C=CHCH2O, 2H), 3.88–3.83 (m, 2H, 3-H and 7-Ha), 3.52–3.47 (m, 3H, 7-Hb, 2-H, 4-H), 3.19 (t, J = 9.3 Hz, 1H, 5-H), 2.90 (m, 1H, 6-H), 2.12–1.80 (m, 17H, lipid-CH2, NHAc, 1-H), 1.66 (s, 3H, lipid-CH3), 1.62 (s, 3H, lipid-CH3), 1.55 (m, 9H, lipid-CH3). 13C NMR (151 MHz, D2O) δ 174.3 (C=O), 160.3 NH4HCO3), 143.1, 136.6, 136.4, 133.4 (lipid-CH3C=CH), 124.5, 124.4, 124.3 (3 × C=CH), 119.4, 119.3 (lipid-C=CHCH2O), 72.9 (C-5), 71.3 (C-4), 62.8, 62.8 (lipid-C=CHCH2O), 62.2 (C-7), 54.0 (C-6), 53.8, 53.7 (C-3), 50.3 (C-2), 38.8, 38.7, 25.6, 25.6, 25.5 (6C, lipid-CH2), 24.8 (lipid-CH3), 24.7, 23.8 (C-1), 22.0 (NHCOCH3), 16.9 (lipid-CH3), 15.6 (lipid-CH3), 15.2 (lipid-CH3), 15.2 (lipid-CH3). 31P NMR (202 MHz, D2O) δ 14.66 (brs), −10.74 (d, J = 26.5 Hz). HRMS (ESI-TOF) calcd for C29H52N2O10P2 (M – H)−, 649.3013; found, 649.3040.
  24 in total

1.  Better substrates for bacterial transglycosylases.

Authors:  X Y Ye; M C Lo; L Brunner; D Walker; D Kahne; S Walker
Journal:  J Am Chem Soc       Date:  2001-04-04       Impact factor: 15.419

2.  Synthesis and evaluation of transition-state analogue inhibitors of alpha-1,3-fucosyltransferase.

Authors:  Michael L Mitchell; Feng Tian; Lac V Lee; Chi-Huey Wong
Journal:  Angew Chem Int Ed Engl       Date:  2002-08-16       Impact factor: 15.336

Review 3.  Bacterial transglycosylase inhibitors.

Authors:  Bohdan Ostash; Suzanne Walker
Journal:  Curr Opin Chem Biol       Date:  2005-10       Impact factor: 8.822

4.  Crystal structure of a peptidoglycan glycosyltransferase suggests a model for processive glycan chain synthesis.

Authors:  Yanqiu Yuan; Dianah Barrett; Yi Zhang; Daniel Kahne; Piotr Sliz; Suzanne Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-08       Impact factor: 11.205

5.  Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis.

Authors:  Andrew L Lovering; Liza H de Castro; Daniel Lim; Natalie C J Strynadka
Journal:  Science       Date:  2007-03-09       Impact factor: 47.728

Review 6.  Inhibition of transglycosylation involved in bacterial peptidoglycan synthesis.

Authors:  R C Goldman; D Gange
Journal:  Curr Med Chem       Date:  2000-08       Impact factor: 4.530

Review 7.  Targeting the forgotten transglycosylases.

Authors:  Judy Halliday; Declan McKeveney; Craig Muldoon; Premraj Rajaratnam; Wim Meutermans
Journal:  Biochem Pharmacol       Date:  2005-11-18       Impact factor: 5.858

8.  General synthesis and biological evaluation of alpha-1-C-substituted derivatives of fagomine (2-deoxynojirimycin-alpha-C-glycosides).

Authors:  Jean-Yves Goujon; David Gueyrard; Philippe Compain; Olivier R Martin; Kyoko Ikeda; Atsushi Kato; Naoki Asano
Journal:  Bioorg Med Chem       Date:  2005-03-15       Impact factor: 3.641

Review 9.  Treatment of Clostridium difficile infection.

Authors:  Dale N Gerding; Carlene A Muto; Robert C Owens
Journal:  Clin Infect Dis       Date:  2008-01-15       Impact factor: 9.079

Review 10.  Glycosyltransferases: structures, functions, and mechanisms.

Authors:  L L Lairson; B Henrissat; G J Davies; S G Withers
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

View more
  5 in total

1.  Synthesis of modified 1,5-imino-d-xylitols as ligands for lysosomal β-glucocerebrosidase.

Authors:  Manuel Zoidl; Andreas Wolfsgruber; Michael Schalli; Seyed A Nasseri; Patrick Weber; Arnold E Stütz; Stephen G Withers; Tanja M Wrodnigg
Journal:  Monatsh Chem       Date:  2019-05-11       Impact factor: 1.451

2.  Towards new antibiotics targeting bacterial transglycosylase: Synthesis of a Lipid II analog as stable transition-state mimic inhibitor.

Authors:  Xiaolei Wang; Larissa Krasnova; Kevin Binchia Wu; Wei-Shen Wu; Ting-Jen Cheng; Chi-Huey Wong
Journal:  Bioorg Med Chem Lett       Date:  2018-03-15       Impact factor: 2.823

Review 3.  Glycosyltransferases and Transpeptidases/Penicillin-Binding Proteins: Valuable Targets for New Antibacterials.

Authors:  Eric Sauvage; Mohammed Terrak
Journal:  Antibiotics (Basel)       Date:  2016-02-17

4.  Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase.

Authors:  Ana S Ramírez; Jérémy Boilevin; Ahmad Reza Mehdipour; Gerhard Hummer; Tamis Darbre; Jean-Louis Reymond; Kaspar P Locher
Journal:  Nat Commun       Date:  2018-01-31       Impact factor: 14.919

5.  N-Alkylated Iminosugar Based Ligands: Synthesis and Inhibition of Human Lysosomal β-Glucocerebrosidase.

Authors:  Andreas Wolfsgruber; Martin Thonhofer; Patrick Weber; Seyed A Nasseri; Roland Fischer; Michael Schalli; Arnold E Stütz; Stephen G Withers; Tanja M Wrodnigg
Journal:  Molecules       Date:  2020-10-11       Impact factor: 4.411

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.