Literature DB >> 25136060

Branching out in roots: uncovering form, function, and regulation.

Jonathan A Atkinson1, Amanda Rasmussen1, Richard Traini1, Ute Voß1, Craig Sturrock1, Sacha J Mooney1, Darren M Wells1, Malcolm J Bennett2.   

Abstract

Root branching is critical for plants to secure anchorage and ensure the supply of water, minerals, and nutrients. To date, research on root branching has focused on lateral root development in young seedlings. However, many other programs of postembryonic root organogenesis exist in angiosperms. In cereal crops, the majority of the mature root system is composed of several classes of adventitious roots that include crown roots and brace roots. In this Update, we initially describe the diversity of postembryonic root forms. Next, we review recent advances in our understanding of the genes, signals, and mechanisms regulating lateral root and adventitious root branching in the plant models Arabidopsis (Arabidopsis thaliana), maize (Zea mays), and rice (Oryza sativa). While many common signals, regulatory components, and mechanisms have been identified that control the initiation, morphogenesis, and emergence of new lateral and adventitious root organs, much more remains to be done. We conclude by discussing the challenges and opportunities facing root branching research.
© 2014 American Society of Plant Biologists. All Rights Reserved.

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Year:  2014        PMID: 25136060      PMCID: PMC4213086          DOI: 10.1104/pp.114.245423

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  89 in total

1.  Transcript profiling during the early development of the maize brace root via Solexa sequencing.

Authors:  Yan-Jie Li; Ya-Ru Fu; Jin-Guang Huang; Chang-Ai Wu; Cheng-Chao Zheng
Journal:  FEBS J       Date:  2010-12-01       Impact factor: 5.542

Review 2.  Root nutrient foraging.

Authors:  Ricardo F H Giehl; Nicolaus von Wirén
Journal:  Plant Physiol       Date:  2014-07-31       Impact factor: 8.340

3.  Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1.

Authors:  Céline Sorin; John D Bussell; Isabelle Camus; Karin Ljung; Mariusz Kowalczyk; Gaia Geiss; Heather McKhann; Christophe Garcion; Hervé Vaucheret; Göran Sandberg; Catherine Bellini
Journal:  Plant Cell       Date:  2005-04-13       Impact factor: 11.277

Review 4.  From weeds to crops: genetic analysis of root development in cereals.

Authors:  Frank Hochholdinger; Woong June Park; Michaela Sauer; Katrin Woll
Journal:  Trends Plant Sci       Date:  2004-01       Impact factor: 18.313

5.  Comparative transcriptome profiling of maize coleoptilar nodes during shoot-borne root initiation.

Authors:  Nils Muthreich; Christine Majer; Mary Beatty; Anja Paschold; André Schützenmeister; Yan Fu; Waqas Ahmed Malik; Patrick S Schnable; Hans-Peter Piepho; Hajime Sakai; Frank Hochholdinger
Journal:  Plant Physiol       Date:  2013-07-10       Impact factor: 8.340

6.  Root system architecture: insights from Arabidopsis and cereal crops.

Authors:  Stephanie Smith; Ive De Smet
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-06-05       Impact factor: 6.237

7.  Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues.

Authors:  Mikaël Lucas; Kim Kenobi; Daniel von Wangenheim; Ute Voβ; Kamal Swarup; Ive De Smet; Daniël Van Damme; Tara Lawrence; Benjamin Péret; Eric Moscardi; Daniel Barbeau; Christophe Godin; David Salt; Soazig Guyomarc'h; Ernst H K Stelzer; Alexis Maizel; Laurent Laplaze; Malcolm J Bennett
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-11       Impact factor: 11.205

8.  The auxin signalling network translates dynamic input into robust patterning at the shoot apex.

Authors:  Teva Vernoux; Géraldine Brunoud; Etienne Farcot; Valérie Morin; Hilde Van den Daele; Jonathan Legrand; Marina Oliva; Pradeep Das; Antoine Larrieu; Darren Wells; Yann Guédon; Lynne Armitage; Franck Picard; Soazig Guyomarc'h; Coralie Cellier; Geraint Parry; Rachil Koumproglou; John H Doonan; Mark Estelle; Christophe Godin; Stefan Kepinski; Malcolm Bennett; Lieven De Veylder; Jan Traas
Journal:  Mol Syst Biol       Date:  2011-07-05       Impact factor: 11.429

9.  Opposite root growth phenotypes of hy5 versus hy5 hyh mutants correlate with increased constitutive auxin signaling.

Authors:  Richard Sibout; Poornima Sukumar; Chamari Hettiarachchi; Magnus Holm; Gloria K Muday; Christian S Hardtke
Journal:  PLoS Genet       Date:  2006-11-24       Impact factor: 5.917

10.  Sequential induction of auxin efflux and influx carriers regulates lateral root emergence.

Authors:  Benjamin Péret; Alistair M Middleton; Andrew P French; Antoine Larrieu; Anthony Bishopp; Maria Njo; Darren M Wells; Silvana Porco; Nathan Mellor; Leah R Band; Ilda Casimiro; Jürgen Kleine-Vehn; Steffen Vanneste; Ilkka Sairanen; Romain Mallet; Göran Sandberg; Karin Ljung; Tom Beeckman; Eva Benkova; Jiří Friml; Eric Kramer; John R King; Ive De Smet; Tony Pridmore; Markus Owen; Malcolm J Bennett
Journal:  Mol Syst Biol       Date:  2013-10-22       Impact factor: 11.429

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  67 in total

1.  New insights to lateral rooting: Differential responses to heterogeneous nitrogen availability among maize root types.

Authors:  Peng Yu; Philip J White; Chunjian Li
Journal:  Plant Signal Behav       Date:  2015-10-06

Review 2.  The Physiology of Adventitious Roots.

Authors:  Bianka Steffens; Amanda Rasmussen
Journal:  Plant Physiol       Date:  2015-12-23       Impact factor: 8.340

3.  Relationships between root diameter, root length and root branching along lateral roots in adult, field-grown maize.

Authors:  Qian Wu; Loïc Pagès; Jie Wu
Journal:  Ann Bot       Date:  2016-01-07       Impact factor: 4.357

4.  Focus on roots.

Authors:  Niko Geldner; David E Salt
Journal:  Plant Physiol       Date:  2014-10       Impact factor: 8.340

Review 5.  Pivotal role of LBD16 in root and root-like organ initiation.

Authors:  Wu Liu; Jie Yu; Yachao Ge; Peng Qin; Lin Xu
Journal:  Cell Mol Life Sci       Date:  2018-06-25       Impact factor: 9.261

6.  Control of Arabidopsis lateral root primordium boundaries by MYB36.

Authors:  María Fernández-Marcos; Bénédicte Desvoyes; Concepción Manzano; Louisa M Liberman; Philip N Benfey; Juan C Del Pozo; Crisanto Gutierrez
Journal:  New Phytol       Date:  2016-11-07       Impact factor: 10.151

7.  SAUR15 Connects Auxin Perception to Lateral and Adventitious Root Formation.

Authors:  Charles Copeland
Journal:  Plant Physiol       Date:  2020-10       Impact factor: 8.340

8.  DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus.

Authors:  Olivier Godfroy; Toshiki Uji; Chikako Nagasato; Agnieszka P Lipinska; Delphine Scornet; Akira F Peters; Komlan Avia; Sebastien Colin; Laure Mignerot; Taizo Motomura; J Mark Cock; Susana M Coelho
Journal:  Plant Cell       Date:  2017-12-05       Impact factor: 11.277

Review 9.  Regulatory networks controlling the development of the root system and the formation of lateral roots: a comparative analysis of the roles of pericycle and vascular cambium.

Authors:  Donato Chiatante; Thomas Rost; John Bryant; Gabriella Stefania Scippa
Journal:  Ann Bot       Date:  2018-11-03       Impact factor: 4.357

10.  Relationship between growth stage of Brassica rapa var. perviridis and the abilities for uptake and translocation of pesticides in soil.

Authors:  Sayuri Namiki; Nobuyasu Seike; Yutaka Motoki
Journal:  J Pestic Sci       Date:  2019-02-20       Impact factor: 1.519

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