Literature DB >> 25129622

¹³Cα decoupling during direct observation of carbonyl resonances in solution NMR of isotopically enriched proteins.

Jinfa Ying1, Fang Li, Jung Ho Lee, Ad Bax.   

Abstract

Direct detection of (13)C can be advantageous when studying uniformly enriched proteins, in particular for paramagnetic proteins or when hydrogen exchange with solvent is fast. A scheme recently introduced for long-observation-window band-selective homonuclear decoupling in solid state NMR, LOW-BASHD (Struppe et al. in J Magn Reson 236:89-94, 2013) is shown to be effective for (13)C(α) decoupling during direct (13)C' observation in solution NMR experiments too. For this purpose, adjustment of the decoupling pulse parameters and delays is demonstrated to be important for increasing spectral resolution, to reduce three-spin effects, and to decrease the intensity of decoupling side-bands. LOW-BASHD then yields (13)C' line widths comparable to those obtained with the popular IPAP method, while enhancing sensitivity by ca 35 %. As a practical application of LOW-BASHD decoupling, requiring quantitative intensity measurement over a wide dynamic range, the impact of lipid binding on the (13)C'-detected NCO spectrum of the intrinsically disordered protein α-synuclein is compared with that on the (1)H-detected (1)H-(15)N HSQC spectrum. Results confirm that synuclein's "dark state" behavior is not caused by paramagnetic relaxation or rapid hydrogen exchange.

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Year:  2014        PMID: 25129622      PMCID: PMC4156133          DOI: 10.1007/s10858-014-9853-z

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  18 in total

1.  A novel strategy for the assignment of side-chain resonances in completely deuterated large proteins using 13C spectroscopy.

Authors:  Alexander Eletsky; Osvaldo Moreira; Helena Kovacs; Konstantin Pervushin
Journal:  J Biomol NMR       Date:  2003-06       Impact factor: 2.835

2.  Complete assignment of heteronuclear protein resonances by protonless NMR spectroscopy.

Authors:  Wolfgang Bermel; Ivano Bertini; Luminita Duma; Isabella C Felli; Lyndon Emsley; Roberta Pierattelli; Paul R Vasos
Journal:  Angew Chem Int Ed Engl       Date:  2005-05-13       Impact factor: 15.336

3.  Pure shift proton DOSY: diffusion-ordered 1H spectra without multiplet structure.

Authors:  Mathias Nilsson; Gareth A Morris
Journal:  Chem Commun (Camb)       Date:  2007-01-31       Impact factor: 6.222

4.  Multiple tight phospholipid-binding modes of alpha-synuclein revealed by solution NMR spectroscopy.

Authors:  Christina R Bodner; Christopher M Dobson; Ad Bax
Journal:  J Mol Biol       Date:  2009-05-27       Impact factor: 5.469

5.  NMR spectroscopic studies of intrinsically disordered proteins at near-physiological conditions.

Authors:  Sergio Gil; Tomáš Hošek; Zsofia Solyom; Rainer Kümmerle; Bernhard Brutscher; Roberta Pierattelli; Isabella C Felli
Journal:  Angew Chem Int Ed Engl       Date:  2013-09-20       Impact factor: 15.336

6.  Line narrowing in spectra of proteins dissolved in a dilute liquid crystalline phase by band-selective adiabatic decoupling: application to 1HN-15N residual dipolar coupling measurements.

Authors:  C W Vander Kooi; E Kupce; E R Zuiderweg; M Pellecchia
Journal:  J Biomol NMR       Date:  1999-12       Impact factor: 2.835

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Conformational properties of alpha-synuclein in its free and lipid-associated states.

Authors:  D Eliezer; E Kutluay; R Bussell; G Browne
Journal:  J Mol Biol       Date:  2001-04-06       Impact factor: 5.469

9.  Long-observation-window band-selective homonuclear decoupling: increased sensitivity and resolution in solid-state NMR spectroscopy of proteins.

Authors:  Jochem O Struppe; Chen Yang; Yachong Wang; Roy V Hernandez; Lisa M Shamansky; Leonard J Mueller
Journal:  J Magn Reson       Date:  2013-09-13       Impact factor: 2.229

10.  13C direct detection experiments on the paramagnetic oxidized monomeric copper, zinc superoxide dismutase.

Authors:  Wolfgang Bermel; Ivano Bertini; Isabella C Felli; Rainer Kümmerle; Roberta Pierattelli
Journal:  J Am Chem Soc       Date:  2003-12-31       Impact factor: 15.419

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  3 in total

1.  Direct ¹³C-detected NMR experiments for mapping and characterization of hydrogen bonds in RNA.

Authors:  Boris Fürtig; Robbin Schnieders; Christian Richter; Heidi Zetzsche; Sara Keyhani; Christina Helmling; Helena Kovacs; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2016-02-06       Impact factor: 2.835

Review 2.  13C Direct Detected NMR for Challenging Systems.

Authors:  Isabella C Felli; Roberta Pierattelli
Journal:  Chem Rev       Date:  2022-01-13       Impact factor: 72.087

3.  Visualizing unresolved scalar couplings by real-time J-upscaled NMR.

Authors:  Simon Glanzer; Klaus Zangger
Journal:  J Am Chem Soc       Date:  2015-04-13       Impact factor: 15.419

  3 in total

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