Literature DB >> 25127057

TRIM proteins regulate autophagy and can target autophagic substrates by direct recognition.

Michael A Mandell1, Ashish Jain2, John Arko-Mensah1, Santosh Chauhan1, Tomonori Kimura1, Christina Dinkins1, Guido Silvestri3, Jan Münch4, Frank Kirchhoff4, Anne Simonsen5, Yongjie Wei6, Beth Levine6, Terje Johansen2, Vojo Deretic7.   

Abstract

Autophagy, a homeostatic process whereby eukaryotic cells target cytoplasmic cargo for degradation, plays a broad role in health and disease states. Here we screened the TRIM family for roles in autophagy and found that half of TRIMs modulated autophagy. In mechanistic studies, we show that TRIMs associate with autophagy factors and act as platforms assembling ULK1 and Beclin 1 in their activated states. Furthermore, TRIM5α acts as a selective autophagy receptor. Based on direct sequence-specific recognition, TRIM5α delivered its cognate cytosolic target, a viral capsid protein, for autophagic degradation. Thus, our study establishes that TRIMs can function both as regulators of autophagy and as autophagic cargo receptors, and reveals a basis for selective autophagy in mammalian cells.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25127057      PMCID: PMC4146662          DOI: 10.1016/j.devcel.2014.06.013

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  72 in total

Review 1.  Ubiquitination and selective autophagy.

Authors:  S Shaid; C H Brandts; H Serve; I Dikic
Journal:  Cell Death Differ       Date:  2012-06-22       Impact factor: 15.828

2.  A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.

Authors:  Vladimir Kirkin; Trond Lamark; Yu-Shin Sou; Geir Bjørkøy; Jennifer L Nunn; Jack-Ansgar Bruun; Elena Shvets; David G McEwan; Terje H Clausen; Philipp Wild; Ivana Bilusic; Jean-Philippe Theurillat; Aud Øvervatn; Tetsuro Ishii; Zvulun Elazar; Masaaki Komatsu; Ivan Dikic; Terje Johansen
Journal:  Mol Cell       Date:  2009-02-27       Impact factor: 17.970

3.  The E3-ligase TRIM family of proteins regulates signaling pathways triggered by innate immune pattern-recognition receptors.

Authors:  Gijs A Versteeg; Ricardo Rajsbaum; Maria Teresa Sánchez-Aparicio; Ana M Maestre; Julio Valdiviezo; Mude Shi; Kyung-Soo Inn; Ana Fernandez-Sesma; Jae Jung; Adolfo García-Sastre
Journal:  Immunity       Date:  2013-02-21       Impact factor: 31.745

4.  Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC.

Authors:  Nicole C McKnight; Harold B J Jefferies; Endalkachew A Alemu; Rebecca E Saunders; Michael Howell; Terje Johansen; Sharon A Tooze
Journal:  EMBO J       Date:  2012-02-21       Impact factor: 11.598

5.  The LRR and RING domain protein LRSAM1 is an E3 ligase crucial for ubiquitin-dependent autophagy of intracellular Salmonella Typhimurium.

Authors:  Alan Huett; Robert J Heath; Jakob Begun; Slim O Sassi; Leigh A Baxt; Jatin M Vyas; Marcia B Goldberg; Ramnik J Xavier
Journal:  Cell Host Microbe       Date:  2012-12-13       Impact factor: 21.023

6.  Tripartite motif containing 28 (Trim28) can regulate cell proliferation by bridging HDAC1/E2F interactions.

Authors:  Lu Chen; Dung-Tsa Chen; Courtney Kurtyka; Bhupendra Rawal; William J Fulp; Eric B Haura; W Douglas Cress
Journal:  J Biol Chem       Date:  2012-10-11       Impact factor: 5.157

7.  ATG8 family proteins act as scaffolds for assembly of the ULK complex: sequence requirements for LC3-interacting region (LIR) motifs.

Authors:  Endalkachew Ashenafi Alemu; Trond Lamark; Knut Martin Torgersen; Aasa Birna Birgisdottir; Kenneth Bowitz Larsen; Ashish Jain; Hallvard Olsvik; Aud Øvervatn; Vladimir Kirkin; Terje Johansen
Journal:  J Biol Chem       Date:  2012-10-05       Impact factor: 5.157

8.  LC3C, bound selectively by a noncanonical LIR motif in NDP52, is required for antibacterial autophagy.

Authors:  Natalia von Muhlinen; Masato Akutsu; Benjamin J Ravenhill; Ágnes Foeglein; Stuart Bloor; Trevor J Rutherford; Stefan M V Freund; David Komander; Felix Randow
Journal:  Mol Cell       Date:  2012-09-27       Impact factor: 17.970

9.  Sterical hindrance promotes selectivity of the autophagy cargo receptor NDP52 for the danger receptor galectin-8 in antibacterial autophagy.

Authors:  Sai Li; Michal P Wandel; Fudong Li; Zhonghua Liu; Chao He; Jihui Wu; Yunyu Shi; Felix Randow
Journal:  Sci Signal       Date:  2013-02-05       Impact factor: 8.192

10.  The E3-ubiquitin ligase TRIM50 interacts with HDAC6 and p62, and promotes the sequestration and clearance of ubiquitinated proteins into the aggresome.

Authors:  Carmela Fusco; Lucia Micale; Mikhail Egorov; Maria Monti; Ester Valentina D'Addetta; Bartolomeo Augello; Flora Cozzolino; Alessia Calcagnì; Andrea Fontana; Roman S Polishchuk; Gerard Didelot; Alexandre Reymond; Piero Pucci; Giuseppe Merla
Journal:  PLoS One       Date:  2012-07-09       Impact factor: 3.240

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  152 in total

1.  Peptidoglycan Recognition Protein 4 Suppresses Early Inflammatory Responses to Bordetella pertussis and Contributes to Sphingosine-1-Phosphate Receptor Agonist-Mediated Disease Attenuation.

Authors:  Ciaran Skerry; William E Goldman; Nicholas H Carbonetti
Journal:  Infect Immun       Date:  2019-01-24       Impact factor: 3.441

Review 2.  Autophagy and checkpoints for intracellular pathogen defense.

Authors:  Geraldine L C Paulus; Ramnik J Xavier
Journal:  Curr Opin Gastroenterol       Date:  2015-01       Impact factor: 3.287

3.  TRIM5α-Mediated Ubiquitin Chain Conjugation Is Required for Inhibition of HIV-1 Reverse Transcription and Capsid Destabilization.

Authors:  Edward M Campbell; Jared Weingart; Paola Sette; Silvana Opp; Jaya Sastri; Sarah K O'Connor; Sarah Talley; Felipe Diaz-Griffero; Vanessa Hirsch; Fadila Bouamr
Journal:  J Virol       Date:  2015-12-16       Impact factor: 5.103

4.  K63-Linked Ubiquitin Is Required for Restriction of HIV-1 Reverse Transcription and Capsid Destabilization by Rhesus TRIM5α.

Authors:  Sabrina Imam; Sevnur Kömürlü; Jessica Mattick; Anastasia Selyutina; Sarah Talley; Amani Eddins; Felipe Diaz-Griffero; Edward M Campbell
Journal:  J Virol       Date:  2019-06-28       Impact factor: 5.103

5.  TRIM9 short isoform preferentially promotes DNA and RNA virus-induced production of type I interferon by recruiting GSK3β to TBK1.

Authors:  Yunfei Qin; Qingxiang Liu; Shuo Tian; Weihong Xie; Jun Cui; Rong-Fu Wang
Journal:  Cell Res       Date:  2016-02-26       Impact factor: 25.617

6.  Structural insights into the ubiquitin recognition by OPTN (optineurin) and its regulation by TBK1-mediated phosphorylation.

Authors:  Faxiang Li; Daichao Xu; Yingli Wang; Zixuan Zhou; Jianping Liu; Shichen Hu; Yukang Gong; Junying Yuan; Lifeng Pan
Journal:  Autophagy       Date:  2018-02-02       Impact factor: 16.016

7.  TRIMs and Galectins Globally Cooperate and TRIM16 and Galectin-3 Co-direct Autophagy in Endomembrane Damage Homeostasis.

Authors:  Santosh Chauhan; Suresh Kumar; Ashish Jain; Marisa Ponpuak; Michal H Mudd; Tomonori Kimura; Seong Won Choi; Ryan Peters; Michael Mandell; Jack-Ansgar Bruun; Terje Johansen; Vojo Deretic
Journal:  Dev Cell       Date:  2016-09-29       Impact factor: 12.270

8.  Expression and Significance of TRIM 28 in Squamous Carcinoma of Esophagus.

Authors:  Bo Liu; Xiujuan Li; Fengxi Liu; Fengyu Li; Shuxia Wei; Junchao Liu; Yang Lv
Journal:  Pathol Oncol Res       Date:  2018-11-27       Impact factor: 3.201

9.  TRIM17 contributes to autophagy of midbodies while actively sparing other targets from degradation.

Authors:  Michael A Mandell; Ashish Jain; Suresh Kumar; Moriah J Castleman; Tahira Anwar; Eeva-Liisa Eskelinen; Terje Johansen; Rytis Prekeris; Vojo Deretic
Journal:  J Cell Sci       Date:  2016-08-25       Impact factor: 5.285

Review 10.  Mechanisms of Selective Autophagy in Normal Physiology and Cancer.

Authors:  Joseph D Mancias; Alec C Kimmelman
Journal:  J Mol Biol       Date:  2016-03-04       Impact factor: 5.469

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