Literature DB >> 25124392

UDP-galactose 4'-epimerase from the liver fluke, Fasciola hepatica: biochemical characterization of the enzyme and identification of inhibitors.

Veronika L Zinsser1, Steffen Lindert2, Samantha Banford1, Elizabeth M Hoey1, Alan Trudgett1, David J Timson1.   

Abstract

Leloir pathway enzyme uridine diphosphate (UDP)-galactose 4'-epimerase from the common liver fluke Fasciola hepatica (FhGALE) was identified and characterized. The enzyme can be expressed in, and purified from, Escherichia coli. The recombinant enzyme is active: the K(m) (470 μM) is higher than the corresponding human enzyme (HsGALE), whereas the k(cat) (2.3 s(-1)) is substantially lower. FhGALE binds NAD(+) and has shown to be dimeric by analytical gel filtration. Like the human and yeast GALEs, FhGALE is stabilized by the substrate UDP-galactose. Molecular modelling predicted that FhGALE adopts a similar overall fold to HsGALE and that tyrosine 155 is likely to be the catalytically critical residue in the active site. In silico screening of the National Cancer Institute Developmental Therapeutics Program library identified 40 potential inhibitors of FhGALE which were tested in vitro. Of these, 6 showed concentration-dependent inhibition of FhGALE, some with nanomolar IC50 values. Two inhibitors (5-fluoroorotate and N-[(benzyloxy)carbonyl]leucyltryptophan) demonstrated selectivity for FhGALE over HsGALE. These compounds also thermally destabilized FhGALE in a concentration-dependent manner. Interestingly, the selectivity of 5-fluoroorotate was not shown by orotic acid, which differs in structure by 1 fluorine atom. These results demonstrate that, despite the structural and biochemical similarities of FhGALE and HsGALE, it is possible to discover compounds which preferentially inhibit FhGALE.

Entities:  

Keywords:  N-[(benzyloxy)carbonyl]leucyltryptophan

Mesh:

Substances:

Year:  2014        PMID: 25124392      PMCID: PMC4515351          DOI: 10.1017/S003118201400136X

Source DB:  PubMed          Journal:  Parasitology        ISSN: 0031-1820            Impact factor:   3.234


  69 in total

1.  Altered cofactor binding affects stability and activity of human UDP-galactose 4'-epimerase: implications for type III galactosemia.

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Journal:  Biochim Biophys Acta       Date:  2012-05-18

2.  Differences in uridine diphosphate galactose-4-epimerase between haemolysates of newborns and of adults.

Authors:  W G Ng; G N Donnell; J E Hodgman; W R Bergren
Journal:  Nature       Date:  1967-04-15       Impact factor: 49.962

3.  The relationship of galactose-1-phosphate accumulation and uridyl transferase activity to the differential galactose toxicity in male and female chicks.

Authors:  J S Mayes; L R Miller; F K Myers
Journal:  Biochem Biophys Res Commun       Date:  1970-05-22       Impact factor: 3.575

4.  FhCaBP3: a Fasciola hepatica calcium binding protein with EF-hand and dynein light chain domains.

Authors:  Samantha Banford; Orla Drysdale; Elizabeth M Hoey; Alan Trudgett; David J Timson
Journal:  Biochimie       Date:  2012-11-08       Impact factor: 4.079

5.  Generalised uridine diphosphate galactose-4-epimerase deficiency.

Authors:  J H Walter; R E Roberts; G T Besley; J E Wraith; M A Cleary; J B Holton; R MacFaul
Journal:  Arch Dis Child       Date:  1999-04       Impact factor: 3.791

6.  Identification of novel inhibitors of UDP-Glc 4'-epimerase, a validated drug target for african sleeping sickness.

Authors:  Michael D Urbaniak; Jioji N Tabudravu; Aichi Msaki; Kathy Mansfield Matera; Ruth Brenk; Marcel Jaspars; Michael A J Ferguson
Journal:  Bioorg Med Chem Lett       Date:  2006-09-07       Impact factor: 2.823

7.  Computer-aided identification of Trypanosoma brucei uridine diphosphate galactose 4'-epimerase inhibitors: toward the development of novel therapies for African sleeping sickness.

Authors:  Jacob D Durrant; Michael D Urbaniak; Michael A J Ferguson; J Andrew McCammon
Journal:  J Med Chem       Date:  2010-07-08       Impact factor: 7.446

8.  Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8.

Authors:  Elmar Krieger; Keehyoung Joo; Jinwoo Lee; Jooyoung Lee; Srivatsan Raman; James Thompson; Mike Tyka; David Baker; Kevin Karplus
Journal:  Proteins       Date:  2009

Review 9.  Galactose toxicity in animals.

Authors:  Kent Lai; Louis J Elsas; Klaas J Wierenga
Journal:  IUBMB Life       Date:  2009-11       Impact factor: 3.885

10.  UDP-galactose 4'-epimerase activities toward UDP-Gal and UDP-GalNAc play different roles in the development of Drosophila melanogaster.

Authors:  Jennifer M I Daenzer; Rebecca D Sanders; Darwin Hang; Judith L Fridovich-Keil
Journal:  PLoS Genet       Date:  2012-05-24       Impact factor: 5.917

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  1 in total

1.  Identification of Novel Cyclin A2 Binding Site and Nanomolar Inhibitors of Cyclin A2-CDK2 Complex.

Authors:  Stephanie S Kim; Michele J Alves; Patrick Gygli; Jose Otero; Steffen Lindert
Journal:  Curr Comput Aided Drug Des       Date:  2021       Impact factor: 1.606

  1 in total

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