Literature DB >> 25122854

PCR in diagnosis of invasive aspergillosis: a meta-analysis of diagnostic performance.

Marios Arvanitis1, Panayiotis D Ziakas1, Ioannis M Zacharioudakis1, Fainareti N Zervou1, Angela M Caliendo1, Eleftherios Mylonakis2.   

Abstract

Invasive aspergillosis is a difficult-to-diagnose infection with a high mortality rate that affects high-risk groups such as patients with neutropenia and hematologic malignancies. We performed a bivariate meta-analysis of diagnostic data for an Aspergillus sp. PCR assay with blood specimens from high-risk hematology patients. We included all studies involving human subjects that assessed the performance of any PCR assay for invasive aspergillosis in whole blood or serum and that used the European Organization for the treatment of Cancer/Mycoses Study Group criteria as a reference standard. Three investigators independently searched the literature for eligible studies and extracted the data. Out of a total of 37 studies, 25 met strict quality criteria and were included in our evidence synthesis. Twenty-five studies with 2,595 patients were analyzed. The pooled diagnostic performance of whole-blood and serum PCR assays was moderate, with a sensitivity and specificity of 84% (95% confidence interval [CI], 75 to 91%) and 76% (95% CI, 65 to 84%), respectively, suggesting that a positive or negative result is unable, on its own, to confirm or exclude a suspected infection. The performance of a PCR assay of serum was not significantly different from that of whole blood. Notably, at least two positive PCR test results were found to have a specificity of 95% and a sensitivity of 64% for invasive infection, achieving a high positive likelihood ratio of 12.8. Importantly, the European Aspergillus PCR Initiative (EAPCRI) recommendations improved the performance of the PCR even further when at least two positive specimens were used to define PCR positivity. In conclusion, two positive PCR results should be considered highly indicative of an active Aspergillus sp. infection. Use of the EAPCRI recommendations by clinical laboratories can further enhance PCR performance.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 25122854      PMCID: PMC4187770          DOI: 10.1128/JCM.01365-14

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  70 in total

1.  What is the clinical significance of positive blood cultures with Aspergillus sp in hematopoietic stem cell transplant recipients? A 23 year experience.

Authors:  E Simoneau; M Kelly; A C Labbe; J Roy; M Laverdière
Journal:  Bone Marrow Transplant       Date:  2005-02       Impact factor: 5.483

2.  Comparison of PCR-ELISA and galactomannan detection for the diagnosis of invasive aspergillosis.

Authors:  Jennifer M Scotter; Peter Campbell; Trevor P Anderson; David R Murdoch; Stephen T Chambers; W Nigel Patton
Journal:  Pathology       Date:  2005-06       Impact factor: 5.306

3.  β-D-glucan assay for the diagnosis of invasive fungal infections: a meta-analysis.

Authors:  Drosos E Karageorgopoulos; Evridiki K Vouloumanou; Fotinie Ntziora; Argyris Michalopoulos; Petros I Rafailidis; Matthew E Falagas
Journal:  Clin Infect Dis       Date:  2011-03-15       Impact factor: 9.079

4.  Refining clinical diagnosis with likelihood ratios.

Authors:  David A Grimes; Kenneth F Schulz
Journal:  Lancet       Date:  2005 Apr 23-29       Impact factor: 79.321

5.  In vitro release by Aspergillus fumigatus of galactofuranose antigens, 1,3-beta-D-glucan, and DNA, surrogate markers used for diagnosis of invasive aspergillosis.

Authors:  Monique A S H Mennink-Kersten; Dorien Ruegebrink; Nazhat Wasei; Willem J G Melchers; Paul E Verweij
Journal:  J Clin Microbiol       Date:  2006-05       Impact factor: 5.948

6.  Systemic antifungal prophylaxis after hematopoietic stem cell transplantation: a meta-analysis.

Authors:  Panayiotis D Ziakas; Irene S Kourbeti; Eleftherios Mylonakis
Journal:  Clin Ther       Date:  2014-01-17       Impact factor: 3.393

7.  Revised definitions of invasive fungal disease from the European Organization for Research and Treatment of Cancer/Invasive Fungal Infections Cooperative Group and the National Institute of Allergy and Infectious Diseases Mycoses Study Group (EORTC/MSG) Consensus Group.

Authors:  Ben De Pauw; Thomas J Walsh; J Peter Donnelly; David A Stevens; John E Edwards; Thierry Calandra; Peter G Pappas; Johan Maertens; Olivier Lortholary; Carol A Kauffman; David W Denning; Thomas F Patterson; Georg Maschmeyer; Jacques Bille; William E Dismukes; Raoul Herbrecht; William W Hope; Christopher C Kibbler; Bart Jan Kullberg; Kieren A Marr; Patricia Muñoz; Frank C Odds; John R Perfect; Angela Restrepo; Markus Ruhnke; Brahm H Segal; Jack D Sobel; Tania C Sorrell; Claudio Viscoli; John R Wingard; Theoklis Zaoutis; John E Bennett
Journal:  Clin Infect Dis       Date:  2008-06-15       Impact factor: 9.079

Review 8.  Evaluation of PCR on bronchoalveolar lavage fluid for diagnosis of invasive aspergillosis: a bivariate metaanalysis and systematic review.

Authors:  Wenkui Sun; Ke Wang; Wei Gao; Xin Su; Qian Qian; Xin Lu; Yong Song; Yaling Guo; Yi Shi
Journal:  PLoS One       Date:  2011-12-02       Impact factor: 3.240

9.  Preferred reporting items for systematic reviews and meta-analyses: the PRISMA statement.

Authors:  David Moher; Alessandro Liberati; Jennifer Tetzlaff; Douglas G Altman
Journal:  BMJ       Date:  2009-07-21

10.  Meta-Analyst: software for meta-analysis of binary, continuous and diagnostic data.

Authors:  Byron C Wallace; Christopher H Schmid; Joseph Lau; Thomas A Trikalinos
Journal:  BMC Med Res Methodol       Date:  2009-12-04       Impact factor: 4.615

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  40 in total

1.  Analytical and Clinical Evaluation of the PathoNostics AsperGenius Assay for Detection of Invasive Aspergillosis and Resistance to Azole Antifungal Drugs during Testing of Serum Samples.

Authors:  P Lewis White; Raquel B Posso; Rosemary A Barnes
Journal:  J Clin Microbiol       Date:  2015-04-22       Impact factor: 5.948

2.  Updated practice guidelines for the diagnosis and management of aspergillosis: challenges and opportunities.

Authors:  Michail Alevizakos; Dimitrios Farmakiotis; Eleftherios Mylonakis
Journal:  J Thorac Dis       Date:  2016-12       Impact factor: 2.895

Review 3.  Molecular Diagnostic Testing for Aspergillus.

Authors:  Margaret V Powers-Fletcher; Kimberly E Hanson
Journal:  J Clin Microbiol       Date:  2016-08-03       Impact factor: 5.948

Review 4.  Antifungal stewardship considerations for adults and pediatrics.

Authors:  Rana F Hamdy; Theoklis E Zaoutis; Susan K Seo
Journal:  Virulence       Date:  2016-09-02       Impact factor: 5.882

Review 5.  Aspergillus fumigatus and aspergillosis: From basics to clinics.

Authors:  A Arastehfar; A Carvalho; J Houbraken; L Lombardi; R Garcia-Rubio; J D Jenks; O Rivero-Menendez; R Aljohani; I D Jacobsen; J Berman; N Osherov; M T Hedayati; M Ilkit; D James-Armstrong; T Gabaldón; J Meletiadis; M Kostrzewa; W Pan; C Lass-Flörl; D S Perlin; M Hoenigl
Journal:  Stud Mycol       Date:  2021-05-10       Impact factor: 16.097

6.  Sniffing out the hypoxia volatile metabolic signature of Aspergillus fumigatus.

Authors:  Christiaan A Rees; Pierre-Hugues Stefanuto; Sarah R Beattie; Katherine M Bultman; Robert A Cramer; Jane E Hill
Journal:  J Breath Res       Date:  2017-08-21       Impact factor: 3.262

7.  Molecular Diagnosis of Invasive Aspergillosis and Detection of Azole Resistance by a Newly Commercialized PCR Kit.

Authors:  Eric Dannaoui; Frédéric Gabriel; Manuel Gaboyard; Gaëlle Lagardere; Lucile Audebert; Gilles Quesne; Sandrine Godichaud; Paul E Verweij; Isabelle Accoceberry; Marie-Elisabeth Bougnoux
Journal:  J Clin Microbiol       Date:  2017-08-16       Impact factor: 5.948

Review 8.  Role of Molecular Biomarkers in the Diagnosis of Invasive Fungal Diseases in Children.

Authors:  Anna R Huppler; Brian T Fisher; Thomas Lehrnbecher; Thomas J Walsh; William J Steinbach
Journal:  J Pediatric Infect Dis Soc       Date:  2017-09-01       Impact factor: 3.164

9.  Analytical and Clinical Evaluation of the PathoNostics AsperGenius Assay for Detection of Invasive Aspergillosis and Resistance to Azole Antifungal Drugs Directly from Plasma Samples.

Authors:  P Lewis White; Raquel B Posso; Rosemary A Barnes
Journal:  J Clin Microbiol       Date:  2017-05-17       Impact factor: 5.948

10.  Practice Guidelines for the Diagnosis and Management of Aspergillosis: 2016 Update by the Infectious Diseases Society of America.

Authors:  Thomas F Patterson; George R Thompson; David W Denning; Jay A Fishman; Susan Hadley; Raoul Herbrecht; Dimitrios P Kontoyiannis; Kieren A Marr; Vicki A Morrison; M Hong Nguyen; Brahm H Segal; William J Steinbach; David A Stevens; Thomas J Walsh; John R Wingard; Jo-Anne H Young; John E Bennett
Journal:  Clin Infect Dis       Date:  2016-06-29       Impact factor: 9.079

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