Literature DB >> 25122656

Contribution of above- and below-ground plant traits to the structure and function of grassland soil microbial communities.

N Legay1, C Baxendale2, K Grigulis3, U Krainer4, E Kastl5, M Schloter5, R D Bardgett6, C Arnoldi7, M Bahn4, M Dumont8, F Poly8, T Pommier8, J C Clément7, S Lavorel7.   

Abstract

BACKGROUND AND AIMS: Abiotic properties of soil are known to be major drivers of the microbial community within it. Our understanding of how soil microbial properties are related to the functional structure and diversity of plant communities, however, is limited and largely restricted to above-ground plant traits, with the role of below-ground traits being poorly understood. This study investigated the relative contributions of soil abiotic properties and plant traits, both above-ground and below-ground, to variations in microbial processes involved in grassland nitrogen turnover.
METHODS: In mountain grasslands distributed across three European sites, a correlative approach was used to examine the role of a large range of plant functional traits and soil abiotic factors on microbial variables, including gene abundance of nitrifiers and denitrifiers and their potential activities. KEY
RESULTS: Direct effects of soil abiotic parameters were found to have the most significant influence on the microbial groups investigated. Indirect pathways via plant functional traits contributed substantially to explaining the relative abundance of fungi and bacteria and gene abundances of the investigated microbial communities, while they explained little of the variance in microbial activities. Gene abundances of nitrifiers and denitrifiers were most strongly related to below-ground plant traits, suggesting that they were the most relevant traits for explaining variation in community structure and abundances of soil microbes involved in nitrification and denitrification.
CONCLUSIONS: The results suggest that consideration of plant traits, and especially below-ground traits, increases our ability to describe variation in the abundances and the functional characteristics of microbial communities in grassland soils.
© The Author 2014. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  Ammonia-oxidizing archaea; bacteria; denitrifiers; leaf traits; nitrite oxidizers; nitrite reducers; nutrient availability; plant functional traits; root traits; soil microbial community

Mesh:

Substances:

Year:  2014        PMID: 25122656      PMCID: PMC4171078          DOI: 10.1093/aob/mcu169

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  26 in total

1.  A rapid method of total lipid extraction and purification.

Authors:  E G BLIGH; W J DYER
Journal:  Can J Biochem Physiol       Date:  1959-08

2.  Suites of root traits differ between annual and perennial species growing in the field.

Authors:  Catherine Roumet; Carlos Urcelay; Sandra Díaz
Journal:  New Phytol       Date:  2006       Impact factor: 10.151

3.  The diversity and biogeography of soil bacterial communities.

Authors:  Noah Fierer; Robert B Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-09       Impact factor: 11.205

4.  Assessing the effects of land-use change on plant traits, communities and ecosystem functioning in grasslands: a standardized methodology and lessons from an application to 11 European sites.

Authors:  Eric Garnier; Sandra Lavorel; Pauline Ansquer; Helena Castro; Pablo Cruz; Jiri Dolezal; Ove Eriksson; Claire Fortunel; Helena Freitas; Carly Golodets; Karl Grigulis; Claire Jouany; Elena Kazakou; Jaime Kigel; Michael Kleyer; Veiko Lehsten; Jan Leps; Tonia Meier; Robin Pakeman; Maria Papadimitriou; Vasilios P Papanastasis; Helen Quested; Fabien Quétier; Matt Robson; Catherine Roumet; Graciela Rusch; Christina Skarpe; Marcelo Sternberg; Jean-Pierre Theau; Aurélie Thébault; Denis Vile; Maria P Zarovali
Journal:  Ann Bot       Date:  2006-11-03       Impact factor: 4.357

5.  Effects of aboveground grazing on coupling among nitrifier activity, abundance and community structure.

Authors:  Xavier Le Roux; Franck Poly; Pauline Currey; Claire Commeaux; Brigitte Hai; Graeme W Nicol; James I Prosser; Michael Schloter; Eléonore Attard; Katja Klumpp
Journal:  ISME J       Date:  2007-11-29       Impact factor: 10.302

Review 6.  The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems.

Authors:  Marcel G A van der Heijden; Richard D Bardgett; Nico M van Straalen
Journal:  Ecol Lett       Date:  2007-11-29       Impact factor: 9.492

7.  Incorporating plant functional diversity effects in ecosystem service assessments.

Authors:  Sandra Díaz; Sandra Lavorel; Francesco de Bello; Fabien Quétier; Karl Grigulis; T Matthew Robson
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-19       Impact factor: 11.205

Review 8.  Plant functional traits and soil carbon sequestration in contrasting biomes.

Authors:  Gerlinde B De Deyn; Johannes H C Cornelissen; Richard D Bardgett
Journal:  Ecol Lett       Date:  2008-02-13       Impact factor: 9.492

9.  Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil.

Authors:  Christina Bremer; Gesche Braker; Diethart Matthies; Andreas Reuter; Christof Engels; Ralf Conrad
Journal:  Appl Environ Microbiol       Date:  2007-08-31       Impact factor: 4.792

10.  Archaea predominate among ammonia-oxidizing prokaryotes in soils.

Authors:  S Leininger; T Urich; M Schloter; L Schwark; J Qi; G W Nicol; J I Prosser; S C Schuster; C Schleper
Journal:  Nature       Date:  2006-08-17       Impact factor: 49.962

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  20 in total

1.  Relative contribution of soil, management and traits to co-variations of multiple ecosystem properties in grasslands.

Authors:  Pierre Gos; Grégory Loucougaray; Marie-Pascale Colace; Cindy Arnoldi; Stéphanie Gaucherand; Daphné Dumazel; Lucie Girard; Sarah Delorme; Sandra Lavorel
Journal:  Oecologia       Date:  2016-01-30       Impact factor: 3.225

Review 2.  Animal production and soil characteristics from integrated crop-livestock systems: toward sustainable intensification.

Authors:  Paulo César de Faccio Carvalho; Caitlin Adair Peterson; Pedro Arthur de Albuquerque Nunes; Amanda Posselt Martins; William de Souza Filho; Vanessa Thoma Bertolazi; Taíse Robinson Kunrath; Aníbal de Moraes; Ibanor Anghinoni
Journal:  J Anim Sci       Date:  2018-07-28       Impact factor: 3.159

3.  Host Genotype and Nitrogen Form Shape the Root Microbiome of Pinus radiata.

Authors:  Marta Gallart; Karen L Adair; Jonathan Love; Dean F Meason; Peter W Clinton; Jianming Xue; Matthew H Turnbull
Journal:  Microb Ecol       Date:  2017-09-05       Impact factor: 4.552

4.  Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits.

Authors:  Jonathan W Leff; Richard D Bardgett; Anna Wilkinson; Benjamin G Jackson; William J Pritchard; Jonathan R De Long; Simon Oakley; Kelly E Mason; Nicholas J Ostle; David Johnson; Elizabeth M Baggs; Noah Fierer
Journal:  ISME J       Date:  2018-03-09       Impact factor: 10.302

5.  Community Composition and Abundance of Bacterial, Archaeal and Nitrifying Populations in Savanna Soils on Contrasting Bedrock Material in Kruger National Park, South Africa.

Authors:  Saskia Rughöft; Martina Herrmann; Cassandre S Lazar; Simone Cesarz; Shaun R Levick; Susan E Trumbore; Kirsten Küsel
Journal:  Front Microbiol       Date:  2016-10-19       Impact factor: 5.640

6.  Land-Use Intensity Rather Than Plant Functional Identity Shapes Bacterial and Fungal Rhizosphere Communities.

Authors:  Ricardo Schöps; Kezia Goldmann; Katharina Herz; Guillaume Lentendu; Ingo Schöning; Helge Bruelheide; Tesfaye Wubet; François Buscot
Journal:  Front Microbiol       Date:  2018-11-20       Impact factor: 5.640

7.  Aboveground and Belowground Plant Traits Explain Latitudinal Patterns in Topsoil Fungal Communities From Tropical to Cold Temperate Forests.

Authors:  Jialing Teng; Jing Tian; Romain Barnard; Guirui Yu; Yakov Kuzyakov; Jizhong Zhou
Journal:  Front Microbiol       Date:  2021-06-10       Impact factor: 5.640

8.  Plant diversity and root traits benefit physical properties key to soil function in grasslands.

Authors:  Iain J Gould; John N Quinton; Alexandra Weigelt; Gerlinde B De Deyn; Richard D Bardgett
Journal:  Ecol Lett       Date:  2016-07-26       Impact factor: 9.492

9.  Plant community controls on short-term ecosystem nitrogen retention.

Authors:  Franciska T de Vries; Richard D Bardgett
Journal:  New Phytol       Date:  2016-01-08       Impact factor: 10.151

10.  Land Use Alters the Drought Responses of Productivity and CO2 Fluxes in Mountain Grassland.

Authors:  Johannes Ingrisch; Stefan Karlowsky; Alba Anadon-Rosell; Roland Hasibeder; Alexander König; Angela Augusti; Gerd Gleixner; Michael Bahn
Journal:  Ecosystems       Date:  2017-09-15       Impact factor: 4.217

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