| Literature DB >> 25117516 |
Monika Jankute1, Charlotte V Byng, Luke J Alderwick, Gurdyal S Besra.
Abstract
Mycobacterium species have a highly complex and unique cell wall that consists of a large macromolecular structure termed the mycolyl-arabinogalactan-peptidoglycan (mAGP) complex. This complex is essential for growth, survival and virulence of the human pathogen Mycobacterium tuberculosis, and is the target of several anti-tubercular drugs. The closely related species Corynebacterium glutamicum has proven useful in the study of orthologous M. tuberculosis genes and proteins involved in mAGP synthesis. This study examines the construction of a protein-protein interaction network for the major cell wall component arabinogalactan in C. glutamicum based on the use of a bacterial two-hybrid system. We have identified twenty-four putative homotypic and heterotypic protein interactions in vivo. Our results demonstrate an association between glycosyltransferases, GlfT1 and AftB, and interaction between the sub-units of decaprenylphosphoribose epimerase, DprE1 and DprE2. These analyses have also shown that AftB interacts with AftA, which catalyzes the addition of the first three arabinose units onto the galactan chain. Both AftA and AftB associate with other arabinofuranosyltransferases, including Emb and AftC, that elongate and branch the arabinan domain. Moreover, a number of proteins involved in arabinogalactan biosynthesis were shown to form dimers or multimers. These findings provide a useful recourse for understanding the biosynthesis and function of the mycobacterial cell wall, as well as providing new therapeutic targets.Entities:
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Year: 2014 PMID: 25117516 PMCID: PMC4213368 DOI: 10.1007/s10719-014-9549-3
Source DB: PubMed Journal: Glycoconj J ISSN: 0282-0080 Impact factor: 2.916
Fig. 1Network of C. glutamicum proteins found to be important for cell wall assembly round the GlfT2 protein as determined by STRING analysis. Lines connecting the nodes indicate various interaction data supporting the network, colored by evidence type
Predicted topology and function of C. glutamicum proteins described in this study
| Protein | Predicted topology | Function |
|---|---|---|
| WecA | transmembrane | UDP-GlcNAc-1-phosphatetransferase |
| WbbL | soluble | α-3-L-rhamnosyltransferase |
| GlfT1 | soluble | UDP-galactofuranosyltransferase |
| GlfT2 | soluble | UDP-galactofuranosyltransferase |
| AftA | transmembrane | arabinofuranosyltransferase |
| AftB | transmembrane | arabinofuranosyltransferase |
| AftC | transmembrane | arabinofuranosyltransferase |
| AftD | transmembrane | arabinofuranosyltransferase |
| Emb | transmembrane | arabinofuranosyltransferase |
| DprE1 | soluble | decaprenylphosphoryl-α-D-ribose 2'-oxidase |
| DprE2 | soluble | decaprenylphosphoryl-D-2-keto erythro pentose reductase |
| UbiA | transmembrane | decaprenyl-phosphate 5-phosphoribosyltransferase |
Fig. 2BACTH analysis of interactions between AftA and AftB proteins from C. glutamicum. The genes encoding full-length proteins were fused in frame with adenylate cyclase T25 or T18 fragments at N- or C-terminus and expressed in E. coli cya BTH101. a Co-transformants containing two plasmids encoding putative interaction partners were spotted onto selective MacConkey agar supplemented with appropriate antibiotics, 0.5 mM IPTG and 1 % maltose. Plates were incubated at 30 °C for 48 h. Protein-protein interactions are indicated by red colonies through the reconstitution of adenylate cyclase catalytic domain. A strain co-expressing T25 and T18 fragments fused to leucine zipper domain was used as positive control (+), whereas empty pKT25-pUT18, pKT25-pUT18c, pKNT25-pUT18, and pKNT25-pUT18c were used as negative controls (−). b The efficiencies of functional complementation between hybrid proteins were quantified by measuring β-galactosidase activities in suspensions of toluene treated E. coli BTH101 harboring the corresponding plasmids. Results are expressed in Miller units and are the mean ± standard deviation of at least three independent experiments. Statistical significance was determined by Student’s t-test (p < 0.01)
Protein-protein interactions between C. glutamicum AG biosynthetic proteins determined by BACTH
| WecA | WbbL | GlfT1 | GlfT2 | AftA | AftB | AftC | AftD | UbiA | DprE1 | DprE2 | Emb | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| WecA | ✓ | |||||||||||
| WbbL | - | - | ||||||||||
| GlfT1 | - | - | ✓ | |||||||||
| GlfT2 | - | - | - | ✓ | ||||||||
| AftA | - | - | - | - | ✓ | |||||||
| AftB | ✓ | - | ✓ | - | ✓ | ✓ | ||||||
| AftC | ✓ | - | - | - | ✓ | ✓ | ✓ | |||||
| AftD | - | - | - | - | - | - | - | - | ||||
| UbiA | ✓ | ✓ | - | - | ✓ | ✓ | ✓ | - | - | |||
| DprE1 | - | - | - | - | - | - | - | - | - | ✓ | ||
| DprE2 | - | - | ✓ | - | ✓ | ✓ | ✓ | - | - | ✓ | ✓ | |
| Emb | ✓ | - | - | - | ✓ | ✓ | - | - | - | - | - | - |
The positive interaction is indicated as (✓), whereas the lack of interaction is marked as (−)
Fig. 3An interaction network of C. glutamicum proteins involved in AG biosynthesis generated using yEd graph editor software. The circular arrows indicate self-association