Literature DB >> 25114246

A cellular solution to an information-processing problem.

Garud Iyengar1, Madan Rao2.   

Abstract

Signaling receptors on the cell surface are mobile and have evolved to efficiently sense and process mechanical or chemical information. We pose the problem of identifying the optimal strategy for placing a collection of distributed and mobile sensors to faithfully estimate a signal that varies in space and time. The optimal strategy has to balance two opposing objectives: the need to locally assemble sensors to reduce estimation noise and the need to spread them to reduce spatial error. This results in a phase transition in the space of strategies as a function of sensor density and efficiency. We show that these optimal strategies have been arrived at multiple times in diverse cell biology contexts, including the stationary lattice architecture of receptors on the bacterial cell surface and the active clustering of cell-surface signaling receptors in metazoan cells.

Keywords:  active mechanics; information optimization; protein sensors

Mesh:

Substances:

Year:  2014        PMID: 25114246      PMCID: PMC4151762          DOI: 10.1073/pnas.1406608111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  21 in total

1.  Bacterial chemoreceptor arrays are hexagonally packed trimers of receptor dimers networked by rings of kinase and coupling proteins.

Authors:  Ariane Briegel; Xiaoxiao Li; Alexandrine M Bilwes; Kelly T Hughes; Grant J Jensen; Brian R Crane
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-21       Impact factor: 11.205

2.  Statistical mechanics for natural flocks of birds.

Authors:  William Bialek; Andrea Cavagna; Irene Giardina; Thierry Mora; Edmondo Silvestri; Massimiliano Viale; Aleksandra M Walczak
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-16       Impact factor: 11.205

3.  Lateral mobility of individual integrin nanoclusters orchestrates the onset for leukocyte adhesion.

Authors:  Gert Jan Bakker; Christina Eich; Juan A Torreno-Pina; Ruth Diez-Ahedo; Gemma Perez-Samper; Thomas S van Zanten; Carl G Figdor; Alessandra Cambi; Maria F Garcia-Parajo
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-12       Impact factor: 11.205

4.  Active remodeling of cortical actin regulates spatiotemporal organization of cell surface molecules.

Authors:  Kripa Gowrishankar; Subhasri Ghosh; Suvrajit Saha; Rumamol C; Satyajit Mayor; Madan Rao
Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

5.  Principles of E-cadherin supramolecular organization in vivo.

Authors:  Binh-An Truong Quang; Madhav Mani; Olga Markova; Thomas Lecuit; Pierre-François Lenne
Journal:  Curr Biol       Date:  2013-10-31       Impact factor: 10.834

6.  Spatiotemporal regulation of chemical reactions by active cytoskeletal remodeling.

Authors:  Abhishek Chaudhuri; Bhaswati Bhattacharya; Kripa Gowrishankar; Satyajit Mayor; Madan Rao
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

7.  The ribosome as an optimal decoder: a lesson in molecular recognition.

Authors:  Yonatan Savir; Tsvi Tlusty
Journal:  Cell       Date:  2013-04-11       Impact factor: 41.582

8.  Nanoclusters of GPI-anchored proteins are formed by cortical actin-driven activity.

Authors:  Debanjan Goswami; Kripa Gowrishankar; Sameera Bilgrami; Subhasri Ghosh; Riya Raghupathy; Rahul Chadda; Ram Vishwakarma; Madan Rao; Satyajit Mayor
Journal:  Cell       Date:  2008-12-12       Impact factor: 41.582

9.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

Review 10.  Lattices, rafts, and scaffolds: domain regulation of receptor signaling at the plasma membrane.

Authors:  Patrick Lajoie; Jacky G Goetz; James W Dennis; Ivan R Nabi
Journal:  J Cell Biol       Date:  2009-04-27       Impact factor: 10.539

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  5 in total

1.  How receptor diffusion influences gradient sensing.

Authors:  H Nguyen; P Dayan; G J Goodhill
Journal:  J R Soc Interface       Date:  2015-01-06       Impact factor: 4.118

2.  Actomyosin dynamics drive local membrane component organization in an in vitro active composite layer.

Authors:  Darius Vasco Köster; Kabir Husain; Elda Iljazi; Abrar Bhat; Peter Bieling; R Dyche Mullins; Madan Rao; Satyajit Mayor
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-29       Impact factor: 11.205

Review 3.  Collective gradient sensing and chemotaxis: modeling and recent developments.

Authors:  Brian A Camley
Journal:  J Phys Condens Matter       Date:  2018-04-12       Impact factor: 2.333

Review 4.  Current approaches to studying membrane organization.

Authors:  Thomas S van Zanten; Satyajit Mayor
Journal:  F1000Res       Date:  2015-11-30

5.  Signal Amplification in Highly Ordered Networks Is Driven by Geometry.

Authors:  Éva S Vanamee; Gábor Lippner; Denise L Faustman
Journal:  Cells       Date:  2022-01-13       Impact factor: 6.600

  5 in total

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