Literature DB >> 25110018

Tra2 protein biology and mechanisms of splicing control.

Andrew Best1, Caroline Dalgliesh1, Mahsa Kheirollahi-Kouhestani1, Marina Danilenko1, Ingrid Ehrmann1, Alison Tyson-Capper2, David J Elliott1.   

Abstract

Tra2 proteins regulate pre-mRNA splicing in vertebrates and invertebrates, and are involved in important processes ranging from brain development in mice to sex determination in fruitflies. In structure Tra2 proteins contain two RS domains (domains enriched in arginine and serine residues) flanking a central RRM (RNA recognition motif). Understanding the mechanisms of how Tra2 proteins work to control splicing is one of the key requirements to understand their biology. In the present article, we review what is known about how Tra2 proteins regulate splicing decisions in mammals and fruitflies.

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Year:  2014        PMID: 25110018     DOI: 10.1042/BST20140075

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  6 in total

1.  Genetic variants regulating expression levels and isoform diversity during embryogenesis.

Authors:  Enrico Cannavò; Nils Koelling; Dermot Harnett; David Garfield; Francesco P Casale; Lucia Ciglar; Hilary E Gustafson; Rebecca R Viales; Raquel Marco-Ferreres; Jacob F Degner; Bingqing Zhao; Oliver Stegle; Ewan Birney; Eileen E M Furlong
Journal:  Nature       Date:  2016-12-26       Impact factor: 49.962

2.  Conserved proline-directed phosphorylation regulates SR protein conformation and splicing function.

Authors:  Malik M Keshwani; Brandon E Aubol; Laurent Fattet; Chen-Ting Ma; Jinsong Qiu; Patricia A Jennings; Xiang-Dong Fu; Joseph A Adams
Journal:  Biochem J       Date:  2015-03-01       Impact factor: 3.857

Review 3.  Splicing-factor alterations in cancers.

Authors:  Olga Anczuków; Adrian R Krainer
Journal:  RNA       Date:  2016-09       Impact factor: 4.942

4.  Human TRA2A determines influenza A virus host adaptation by regulating viral mRNA splicing.

Authors:  Yinxing Zhu; Ruifang Wang; Luyao Yu; Huimin Sun; Shan Tian; Peng Li; Meilin Jin; Huanchun Chen; Wenjun Ma; Hongbo Zhou
Journal:  Sci Adv       Date:  2020-06-19       Impact factor: 14.136

5.  Interplay between coding and exonic splicing regulatory sequences.

Authors:  Nicolas Fontrodona; Fabien Aubé; Jean-Baptiste Claude; Hélène Polvèche; Sébastien Lemaire; Léon-Charles Tranchevent; Laurent Modolo; Franck Mortreux; Cyril F Bourgeois; Didier Auboeuf
Journal:  Genome Res       Date:  2019-04-08       Impact factor: 9.043

6.  Srrm234, but not canonical SR and hnRNP proteins, drive inclusion of Dscam exon 9 variable exons.

Authors:  Pinar Ustaoglu; Irmgard U Haussmann; Hongzhi Liao; Antonio Torres-Mendez; Roland Arnold; Manuel Irimia; Matthias Soller
Journal:  RNA       Date:  2019-07-10       Impact factor: 4.942

  6 in total

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