Literature DB >> 25105793

A set of versatile brick vectors and promoters for the assembly, expression, and integration of synthetic operons in Methylobacterium extorquens AM1 and other alphaproteobacteria.

Lennart Schada von Borzyskowski1, Mitja Remus-Emsermann1, Ramon Weishaupt1, Julia A Vorholt1, Tobias J Erb1.   

Abstract

The discipline of synthetic biology requires standardized tools and genetic elements to construct novel functionalities in microorganisms; yet, many model systems still lack such tools. Here, we describe a novel set of vectors that allows the convenient construction of synthetic operons in Methylobacterium extorquens AM1, an important alphaproteobacterial model organism for methylotrophy and a promising platform organism for methanol-based biotechnology. In addition, we provide a set of constitutive alphaproteobacterial promoters of different strengths that were characterized in detail by two approaches: on the single-cell scale and on the cell population level. Finally, we describe a straightforward strategy to deliver synthetic constructs to the genome of M. extorquens AM1 and other Alphaproteobacteria. This study defines a new standard to systematically characterize genetic parts for their use in M. extorquens AM1 by using single-cell fluorescence microscopy and opens the toolbox for synthetic biological applications in M. extorquens AM1 and other alphaproteobacterial model systems.

Entities:  

Keywords:  Agrobacterium; Alphaproteobacteria; Caulobacter; Paracoccus; biobricks; operon assembly; promoter library; vector system

Mesh:

Substances:

Year:  2014        PMID: 25105793     DOI: 10.1021/sb500221v

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  12 in total

1.  Versatile Vectors for Efficient Mutagenesis of Bradyrhizobium diazoefficiens and Other Alphaproteobacteria.

Authors:  Raphael Ledermann; Silvan Strebel; Clara Kampik; Hans-Martin Fischer
Journal:  Appl Environ Microbiol       Date:  2016-04-18       Impact factor: 4.792

2.  Production of 2-Hydroxyisobutyric Acid from Methanol by Methylobacterium extorquens AM1 Expressing (R)-3-Hydroxybutyryl Coenzyme A-Isomerizing Enzymes.

Authors:  Maria-Teresa Rohde; Sylvi Tischer; Hauke Harms; Thore Rohwerder
Journal:  Appl Environ Microbiol       Date:  2017-01-17       Impact factor: 4.792

3.  A synthetic pathway for the fixation of carbon dioxide in vitro.

Authors:  Thomas Schwander; Lennart Schada von Borzyskowski; Simon Burgener; Niña Socorro Cortina; Tobias J Erb
Journal:  Science       Date:  2016-11-18       Impact factor: 47.728

4.  Delivering "Chromatic Bacteria" Fluorescent Protein Tags to Proteobacteria Using Conjugation.

Authors:  Rudolf O Schlechter; Mitja Np Remus-Emsermann
Journal:  Bio Protoc       Date:  2019-04-05

5.  Production of 3-hydroxypropionic acid in engineered Methylobacterium extorquens AM1 and its reassimilation through a reductive route.

Authors:  Yi-Ming Yang; Wen-Jing Chen; Jing Yang; Yuan-Ming Zhou; Bo Hu; Min Zhang; Li-Ping Zhu; Guang-Yuan Wang; Song Yang
Journal:  Microb Cell Fact       Date:  2017-10-30       Impact factor: 5.328

6.  Phage-Assisted Evolution of Bacillus methanolicus Methanol Dehydrogenase 2.

Authors:  Timothy B Roth; Benjamin M Woolston; Gregory Stephanopoulos; David R Liu
Journal:  ACS Synth Biol       Date:  2019-03-20       Impact factor: 5.110

7.  Use of rare-earth elements in the phyllosphere colonizer Methylobacterium extorquens PA1.

Authors:  Andrea M Ochsner; Lucas Hemmerle; Thomas Vonderach; Ralph Nüssli; Miriam Bortfeld-Miller; Bodo Hattendorf; Julia A Vorholt
Journal:  Mol Microbiol       Date:  2019-02-17       Impact factor: 3.501

8.  Metabolomics Revealed an Association of Metabolite Changes and Defective Growth in Methylobacterium extorquens AM1 Overexpressing ecm during Growth on Methanol.

Authors:  Jinyu Cui; Nathan M Good; Bo Hu; Jing Yang; Qianwen Wang; Martin Sadilek; Song Yang
Journal:  PLoS One       Date:  2016-04-26       Impact factor: 3.240

9.  Parallel and Divergent Evolutionary Solutions for the Optimization of an Engineered Central Metabolism in Methylobacterium extorquens AM1.

Authors:  Sean Michael Carroll; Lon M Chubiz; Deepa Agashe; Christopher J Marx
Journal:  Microorganisms       Date:  2015-04-09

10.  Design and Control of Extrachromosomal Elements in Methylorubrum extorquens AM1.

Authors:  Martina Carrillo; Marcel Wagner; Florian Petit; Amelie Dransfeld; Anke Becker; Tobias J Erb
Journal:  ACS Synth Biol       Date:  2019-10-21       Impact factor: 5.110

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