Literature DB >> 25101894

A twice-as-smart synthetic G-quartet: PyroTASQ is both a smart quadruplex ligand and a smart fluorescent probe.

Aurélien Laguerre1, Loic Stefan, Manuel Larrouy, David Genest, Jana Novotna, Marc Pirrotta, David Monchaud.   

Abstract

Recent and unambiguous evidences of the formation of DNA and RNA G-quadruplexes in cells has provided solid support for these structures to be considered as valuable targets in oncology. Beyond this, they have lent further credence to the anticancer strategies relying on small molecules that selectively target these higher-order DNA/RNA architectures, referred to as G-quadruplex ligands. They have also shed bright light on the necessity of designing multitasking ligands, displaying not only enticing quadruplex interacting properties (affinity, structural selectivity) but also additional features that make them usable for detecting quadruplexes in living cells, notably for determining whether, when, and where these structures fold and unfold during the cell cycle and also for better assessing the consequences of their stabilization by external agents. Herein, we report a brand new design of such multitasking ligands, whose structure experiences a quadruplex-promoted conformational switch that triggers not only its quadruplex affinity (i.e., smart ligands, which display high affinity and selectivity for DNA/RNA quadruplexes) but also its fluorescence (i.e., smart probes, which behave as selective light-up fluorescent reporters on the basis of a fluorogenic electron redistribution). The first prototype of such multifunctional ligands, termed PyroTASQ, represents a brand new generation of quadruplex ligands that can be referred to as "twice-as-smart" quadruplex ligands.

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Year:  2014        PMID: 25101894     DOI: 10.1021/ja506331x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  High-resolution three-dimensional NMR structure of the KRAS proto-oncogene promoter reveals key features of a G-quadruplex involved in transcriptional regulation.

Authors:  Abdelaziz Kerkour; Julien Marquevielle; Stefaniia Ivashchenko; Liliya A Yatsunyk; Jean-Louis Mergny; Gilmar F Salgado
Journal:  J Biol Chem       Date:  2017-03-22       Impact factor: 5.157

2.  Selective recognition of c-MYC Pu22 G-quadruplex by a fluorescent probe.

Authors:  Qianqian Zhai; Chao Gao; Jieqin Ding; Yashu Zhang; Barira Islam; Wenxian Lan; Haitao Hou; Hua Deng; Jun Li; Zhe Hu; Hany I Mohamed; Shengzhen Xu; Chunyang Cao; Shozeb M Haider; Dengguo Wei
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

3.  Conformation-sensitive nucleoside analogues as topology-specific fluorescence turn-on probes for DNA and RNA G-quadruplexes.

Authors:  Arun A Tanpure; Seergazhi G Srivatsan
Journal:  Nucleic Acids Res       Date:  2015-07-21       Impact factor: 16.971

Review 4.  Hydrogen-Bonded Macrocyclic Supramolecular Systems in Solution and on Surfaces.

Authors:  María J Mayoral; Nerea Bilbao; David González-Rodríguez
Journal:  ChemistryOpen       Date:  2015-10-22       Impact factor: 2.911

5.  Direct visualization of both DNA and RNA quadruplexes in human cells via an uncommon spectroscopic method.

Authors:  Aurélien Laguerre; Judy M Y Wong; David Monchaud
Journal:  Sci Rep       Date:  2016-08-18       Impact factor: 4.379

6.  Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe.

Authors:  Ashok Nuthanakanti; Ishtiyaq Ahmed; Saddam Y Khatik; Kayarat Saikrishnan; Seergazhi G Srivatsan
Journal:  Nucleic Acids Res       Date:  2019-07-09       Impact factor: 16.971

7.  Computational understanding and experimental characterization of twice-as-smart quadruplex ligands as chemical sensors of bacterial nucleotide second messengers.

Authors:  Jie Zhou; Benjamin T Roembke; Gabor Paragi; Aurélien Laguerre; Herman O Sintim; Célia Fonseca Guerra; David Monchaud
Journal:  Sci Rep       Date:  2016-09-26       Impact factor: 4.379

8.  A Water-Soluble Tetraazaperopyrene Dye as Strong G-Quadruplex DNA Binder.

Authors:  Lena Hahn; Niklaas J Buurma; Lutz H Gade
Journal:  Chemistry       Date:  2016-03-21       Impact factor: 5.236

9.  Probing Human Telomeric DNA and RNA Topology and Ligand Binding in a Cellular Model by Using Responsive Fluorescent Nucleoside Probes.

Authors:  Sudeshna Manna; Cornelia H Panse; Vyankat A Sontakke; Sarangamath Sangamesh; Seergazhi G Srivatsan
Journal:  Chembiochem       Date:  2017-07-10       Impact factor: 3.164

10.  Small-Molecule-Based Self-Assembled Ligands for G-Quadruplex DNA Surface Recognition.

Authors:  María Del C Rivera-Sánchez; Marilyn García-Arriaga; Gerard Hobley; Ana V Morales-de-Echegaray; José M Rivera
Journal:  ACS Omega       Date:  2017-10-11
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