| Literature DB >> 25093848 |
Dongwei Dai1, Qiong Lu2, Qinghai Huang1, Pengfei Yang1, Bo Hong1, Yi Xu1, Wenyuan Zhao1, Jianmin Liu1, Qiang Li1.
Abstract
Moyamoya disease (MMD) is a cerebrovascular disease characterized by progressive stenosis of the intracranial internal carotid arteries and their proximal branches. However, the etiology of this rare disease remains unknown. Serum microRNA (miRNA) profiles have been screened to identify novel biomarkers of prognostic values. Here, we identified serum miRNAs that might play an important role in the pathogenesis of MMD. A genome-wide miRNA array analysis of two pooled serum samples from patients with MMD and controls revealed 94 differentially expressed serum miRNAs, including 50 upregulated and 44 downregulated miRNAs. In an independent MMD cohort, real-time PCR confirmed that miR-106b, miR-130a and miR-126 were significantly upregulated while miR-125a-3p was significantly downregulated in serum. GO analysis showed that the differentially expressed serum miRNAs were enriched in metabolic processes, transcription and signal transduction. Pathway analysis showed that the most enriched pathway was mTOR signaling pathway with 16 potential, functional targets. Finally, we found that 16 and 13 aberrant serum miRNAs coordinately inhibited RNF213 and BRCC3 protein expression at the posttranscriptional level, respectively, resulting in defective angiogenesis and MMD pathogenesis. To our knowledge, this is the first study to identify a serum miRNA signature in MMD. Modulation of the mechanism underlying the role of serum miRNAs in MMD is a potential therapeutic strategy and warrants further investigations.Entities:
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Year: 2014 PMID: 25093848 PMCID: PMC4122349 DOI: 10.1371/journal.pone.0102382
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Clinical characteristics of 20 MMD patients.
| No | Presentation | Initial CT or MR Image Findings | Suzuki Stage | Region of Origin(Province) |
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| 1 | IVH | intracerebral hematoma(rt periventricular region) | rt5 lt4 | Shanghai |
| 2 | Infarction | infarction (lt frontal white matter) | rt3 lt2 | Beijing |
| 3 | TIA | lacunae | rt3 lt3 | Guangdong |
| 4 | TIA | normal | rt3 lt2 | Anhui |
| 5 | TIA | normal | rt2 lt3 | Henan |
| 6 | TIA | lacunae | rt3 lt4 | Shandong |
| 7 | Infarction | infarction (rt temperal white matter) | rt4 lt4 | Shanghai |
| 8 | TIA | normal | rt3 lt2 | Hubei |
| 9 | IVH | subarachnoid hemorrhage | rt4 lt3 | Jiangsu |
| 10 | TIA | lacunae | rt1 lt2 | Sichuan |
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| 1 | TIA | lacunae | rt2 lt3 | Hubei |
| 2 | TIA | normal | rt3 lt2 | Xinjiang |
| 3 | TIA | lacunae | rt3 lt3 | Anhui |
| 4 | Infarction | infarction (rt occipital white matter) | rt5 lt4 | Zhejiang |
| 5 | IVH | intraventricular hemorrhage(rt) | rt4 lt4 | Shandong |
| 6 | TIA | lacunae | rt3 lt3 | Jiangsu |
| 7 | TIA | normal | rt2 lt3 | Qinghai |
| 8 | TIA | normal | rt3 lt2 | Fujian |
| 9 | Infarction | infarction (lt temporal white matter) | rt4 lt4 | Shanxi |
| 10 | IVH | intracerebral hematoma(lt periventricular region) | rt4 lt4 | Shanghai |
CT = computerized tomography; IVH = intraventricular hemorrhage; MR = magnetic resonance; TIA = transient ischemic attack; lt = left; rt = right.
Characteristics of the study population.
| Variable | Case | Control | P |
| Age(years) | 34.40±10.29 | 29.50±3.38 | 0.192 |
| Sex(Femal/Male) | 5/5 | 4/6 | 0.653 |
| WBC(×10∧9/L) | 7.73±2.14 | 7.01±1.83 | 0.422 |
| RBC(×10∧12/L) | 4.22±0.44 | 4.50±0.74 | 0.329 |
| GLU(mmol/L) | 5.25±0.65 | 4.91±0.85 | 0.332 |
| K+(mmol/L) | 4.06±0.19 | 4.41±0.83 | 0.212 |
| Na+(mmol/L) | 142.00±2.91 | 141.3±3.96 | 0.657 |
| ALT(U/L) | 28.1±30.11 | 15.42±12.47 | 0.233 |
| AST(U/L) | 13.25±18.56 | 17.61±9.68 | 0.446 |
| TB(umol/L) | 10.25±3.75 | 6.10±3.47 | 0.019 |
| DB(umol/L) | 3.80±1.67 | 2.92±1.37 | 0.205 |
| TC(mmol/L) | 4.27±0.36 | 3.20±0.78 | 0.001 |
| TG(mmol/L) | 0.82±0.31 | 0.96±0.07 | 0.087 |
| HDL(mmol/L) | 1.05±0.21 | 1.03±0.09 | 0.797 |
| LDL(mmol/L) | 2.54±0.34 | 2.08±0.55 | 0.038 |
WBC: white blood cell; RBC: red blood cell; GLU: glucose; ALT: alanine aminotransferase; AST: aspartic acid amino transferase; TB: total bilirubin; DB: direct bilirubin; TC: total cholesterol; TG: triglyceride; HDL: high density lipoprotein; LDL: low density lipoprotein.
Differentially expressed miRNAs in MMD.
| Upregulated miRNAs | Downregulated miRNAs | ||||||
| MiRNA | Fold | MiRNA | Fold | MiRNA | Fold | MiRNA | Fold |
| miR-106b | 247.8 | miR-151-3p | 32.3 | miR-3648 | −207 | miR-1305 | −24.7 |
| miR-140-3p | 145.7 | miR-361-5p | 32.3 | miR-125a-3p | −133 | miR-595 | −19.0 |
| miR-320d | 141.3 | miR-1274b | 29.6 | miR-4299 | −124 | miR-30c-1* | −16.7 |
| miR-29c | 138.1 | miR-146a | 28.7 | miR-1224-5p | −97.8 | miR-769-3p | −15.2 |
| miR-126 | 138 | miR-103 | 28.5 | miR-3692* | −81.6 | miR-371-5p | −5.2 |
| miR-142-3p | 130.7 | miR-101 | 28.5 | miR-32* | −81.5 | miR-4257 | −3.9 |
| let-7i | 121.2 | miR-29a | 26.7 | miR-3198 | −76.9 | miR-3195 | −3.5 |
| miR-320e | 114.3 | miR-145 | 26.6 | miR-3156 | −75.6 | miR-765 | −3.0 |
| miR-122 | 101.1 | miR-877* | 19.4 | miR-1469 | −72.6 | miR-3202 | −2.8 |
| miR-130a | 98.51 | miR-144 | 16.9 | miR-1182 | −71.9 | miR-575 | −2.8 |
| miR-19a | 97.4 | miR-191* | 13.3 | miR-557 | −67.6 | miR-3679-5p | −2.8 |
| miR-107 | 69.4 | miR-19b | 11.9 | miR-1226* | −59.8 | miR-1471 | −2.4 |
| miR-1290 | 67.0 | miR-451 | 9.3 | miR-601 | −59.5 | miR-4271 | −2.4 |
| miR-15b | 61.1 | miR-16 | 7.2 | miR-3149 | −59.3 | miR-423-5p | −2.3 |
| miR-30a | 58.0 | miR-320b | 5.0 | miR-4313 | −57.8 | miR-483-5p | −2.2 |
| miR-1183 | 55.9 | miR-25 | 4.6 | miR-3945 | −53.6 | miR-3188 | −2.2 |
| miR-15a | 46.6 | miR-22 | 4.5 | miR-202 | −52.6 | miR-574-5p | −2.1 |
| miR-185 | 41.0 | miR-21 | 3.5 | miR-3180-5p | −51.1 | miR-4298 | −2.1 |
| miR-338-3p | 41.0 | let-7b | 3.4 | miR-514b-5p | −48.3 | miR-197 | −2.0 |
| let-7c | 40.3 | miR-720 | 3.2 | miR-187* | −47.1 | ||
| miR-4286 | 39.1 | miR-26a | 2.9 | miR-3605-5p | −42.4 | ||
| let-7g | 37.9 | miR-23a | 2.7 | miR-711 | −35.1 | ||
| miR-483-3p | 36.3 | miR-92a | 2.5 | miR-2278 | −30.9 | ||
| let-7a | 34.1 | miR-486-5p | 2.5 | miR-3652 | −27.8 | ||
| miR-20a | 33.8 | miR-30e | 2.2 | miR-3646 | −26.8 | ||
Figure 1Real-time PCR of dysregulated miRNAs.
Expression levels of miR-106b, miR-140-3p, miR-130a, miR-126 and miR-125a-3p in MMD serum were measured by real-time PCR and quantified as described in Methods. * P<0.05 compared with control group.
Top 10 biological processes as potential functional targets (1989).
| Term | Count | P Value |
| protein amino acid phosphorylation | 116 | 1.00E-08 |
| phosphate metabolic process | 150 | 1.97E-07 |
| phosphorus metabolic process | 150 | 1.97E-07 |
| regulation of transcription | 338 | 4.49E-07 |
| phosphorylation | 125 | 1.19E-06 |
| enzyme linked receptor protein signaling pathway | 65 | 1.25E-06 |
| transcription | 278 | 1.61E-06 |
| cellular macromolecule catabolic process | 112 | 7.95E-06 |
| response to peptide hormone stimulus | 35 | 1.18E-05 |
| response to insulin stimulus | 26 | 1.81E-05 |
Enriched pathways for potential functional targets (1989).
| Term | Count | P Value |
| mTOR signaling pathway | 16 | 8.05E-05 |
| Ubiquitin mediated proteolysis | 28 | 2.47E-04 |
| Adherens junction | 19 | 3.14E-04 |
| Endocytosis | 33 | 7.26E-04 |
| Focal adhesion | 35 | 8.35E-04 |
| T cell receptor signaling pathway | 22 | 0.001419 |
| Oocyte meiosis | 21 | 0.004158 |
| Aldosterone-regulated sodium reabsorption | 11 | 0.004868 |
| Axon guidance | 23 | 0.006051 |
| Progesterone-mediated oocyte maturation | 17 | 0.007885 |
| ErbB signaling pathway | 17 | 0.008822 |
| Gap junction | 17 | 0.010962 |
| Regulation of actin cytoskeleton | 32 | 0.01563 |
| Biosynthesis of unsaturated fatty acids | 7 | 0.015886 |
| TGF-beta signaling pathway | 16 | 0.019483 |
| Neurotrophin signaling pathway | 20 | 0.029869 |
| Long-term depression | 13 | 0.032527 |
| Insulin signaling pathway | 21 | 0.036219 |
Figure 2Targets of the differentially expressed miRNAs in mTOR signaling pathway.
Red boxes indicate potential functional targets of the differentially expressed miRNAs in MMD (based on Kanehisa Laboratories on 7/25/12, from KEGG).
Figure 3Network of RNF213- and BRCC3-associated miRNAs in MMD.