Literature DB >> 25087511

Cys-scanning disulfide crosslinking and bayesian modeling probe the transmembrane signaling mechanism of the histidine kinase, PhoQ.

Kathleen S Molnar1, Massimiliano Bonomi2, Riccardo Pellarin2, Graham D Clinthorne3, Gabriel Gonzalez4, Shalom D Goldberg5, Mark Goulian6, Andrej Sali2, William F DeGrado7.   

Abstract

Bacteria transduce signals across the membrane using two-component systems (TCSs), consisting of a membrane-spanning sensor histidine kinase and a cytoplasmic response regulator. In gram-negative bacteria, the PhoPQ TCS senses cations and antimicrobial peptides, yet little is known about the structural changes involved in transmembrane signaling. We construct a model of PhoQ signal transduction using Bayesian inference, based on disulfide crosslinking data and homologous crystal structures. The data are incompatible with a single conformation but are instead consistent with two interconverting structures. These states differ in membrane depth of the periplasmic acidic patch and the reciprocal displacement of diagonal helices along the dimer interface. Studies of multiple histidine kinases suggest this repacking might be a common mode of signal transduction in sensor His-kinase receptors. Because a similar scissors model has been ruled out in CheA-linked chemoreceptors, the evidence suggests that sensor His-kinase and CheA-linked receptors possess different signaling mechanisms.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25087511      PMCID: PMC4322757          DOI: 10.1016/j.str.2014.04.019

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  66 in total

1.  Membrane domain structures of three classes of histidine kinase receptors by cell-free expression and rapid NMR analysis.

Authors:  Innokentiy Maslennikov; Christian Klammt; Eunha Hwang; Georgia Kefala; Mizuki Okamura; Luis Esquivies; Karsten Mörs; Clemens Glaubitz; Witek Kwiatkowski; Young Ho Jeon; Senyon Choe
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-24       Impact factor: 11.205

2.  Structural insight into partner specificity and phosphoryl transfer in two-component signal transduction.

Authors:  Patricia Casino; Vicente Rubio; Alberto Marina
Journal:  Cell       Date:  2009-10-01       Impact factor: 41.582

3.  Structural plasticity and catalysis regulation of a thermosensor histidine kinase.

Authors:  Daniela Albanesi; Mariana Martín; Felipe Trajtenberg; María C Mansilla; Ahmed Haouz; Pedro M Alzari; Diego de Mendoza; Alejandro Buschiazzo
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-04       Impact factor: 11.205

4.  Comprehensive analysis of HAMP domains: implications for transmembrane signal transduction.

Authors:  Stanislaw Dunin-Horkawicz; Andrei N Lupas
Journal:  J Mol Biol       Date:  2010-02-23       Impact factor: 5.469

5.  Transmembrane polar interactions are required for signaling in the Escherichia coli sensor kinase PhoQ.

Authors:  Shalom D Goldberg; Graham D Clinthorne; Mark Goulian; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-19       Impact factor: 11.205

6.  Mutational analyses of HAMP helices suggest a dynamic bundle model of input-output signalling in chemoreceptors.

Authors:  Qin Zhou; Peter Ames; John S Parkinson
Journal:  Mol Microbiol       Date:  2009-07-28       Impact factor: 3.501

7.  Structural analysis of sensor domains from the TMAO-responsive histidine kinase receptor TorS.

Authors:  Jason O Moore; Wayne A Hendrickson
Journal:  Structure       Date:  2009-09-09       Impact factor: 5.006

8.  Multiple approaches converge on the structure of the integrin alphaIIb/beta3 transmembrane heterodimer.

Authors:  Douglas G Metcalf; Dan W Kulp; Joel S Bennett; William F DeGrado
Journal:  J Mol Biol       Date:  2009-06-13       Impact factor: 5.469

9.  Structural analysis of ligand stimulation of the histidine kinase NarX.

Authors:  Jonah Cheung; Wayne A Hendrickson
Journal:  Structure       Date:  2009-02-13       Impact factor: 5.006

10.  Feedback inhibition in the PhoQ/PhoP signaling system by a membrane peptide.

Authors:  Andrew M Lippa; Mark Goulian
Journal:  PLoS Genet       Date:  2009-12-24       Impact factor: 5.917

View more
  57 in total

1.  Sensory domain contraction in histidine kinase CitA triggers transmembrane signaling in the membrane-bound sensor.

Authors:  Michele Salvi; Benjamin Schomburg; Karin Giller; Sabrina Graf; Gottfried Unden; Stefan Becker; Adam Lange; Christian Griesinger
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

2.  Development of a Prototype System for Archiving Integrative/Hybrid Structure Models of Biological Macromolecules.

Authors:  Brinda Vallat; Benjamin Webb; John D Westbrook; Andrej Sali; Helen M Berman
Journal:  Structure       Date:  2018-04-12       Impact factor: 5.006

Review 3.  The accommodation index measures the perturbation associated with insertions and deletions in coiled-coils: Application to understand signaling in histidine kinases.

Authors:  Nathan W Schmidt; Gevorg Grigoryan; William F DeGrado
Journal:  Protein Sci       Date:  2017-02-23       Impact factor: 6.725

4.  Stability and Conformation of a Chemoreceptor HAMP Domain Chimera Correlates with Signaling Properties.

Authors:  Nattakan Sukomon; Joanne Widom; Peter P Borbat; Jack H Freed; Brian R Crane
Journal:  Biophys J       Date:  2017-04-11       Impact factor: 4.033

5.  Conformational Changes of an Interdomain Linker Mediate Mechanical Signal Transmission in Sensor Kinase BvgS.

Authors:  Elodie Lesne; Elian Dupré; Camille Locht; Rudy Antoine; Françoise Jacob-Dubuisson
Journal:  J Bacteriol       Date:  2017-08-22       Impact factor: 3.490

Review 6.  Principles for Integrative Structural Biology Studies.

Authors:  Michael P Rout; Andrej Sali
Journal:  Cell       Date:  2019-05-30       Impact factor: 41.582

7.  Assembly and Molecular Architecture of the Phosphoinositide 3-Kinase p85α Homodimer.

Authors:  Jaclyn LoPiccolo; Seung Joong Kim; Yi Shi; Bin Wu; Haiyan Wu; Brian T Chait; Robert H Singer; Andrej Sali; Michael Brenowitz; Anne R Bresnick; Jonathan M Backer
Journal:  J Biol Chem       Date:  2015-10-16       Impact factor: 5.157

8.  Functional Plasticity of the AgrC Receptor Histidine Kinase Required for Staphylococcal Virulence.

Authors:  Boyuan Wang; Aishan Zhao; Qian Xie; Paul Dominic Olinares; Brian T Chait; Richard P Novick; Tom W Muir
Journal:  Cell Chem Biol       Date:  2017-01-05       Impact factor: 8.116

9.  Determining protein complex structures based on a Bayesian model of in vivo Förster resonance energy transfer (FRET) data.

Authors:  Massimiliano Bonomi; Riccardo Pellarin; Seung Joong Kim; Daniel Russel; Bryan A Sundin; Michael Riffle; Daniel Jaschob; Richard Ramsden; Trisha N Davis; Eric G D Muller; Andrej Sali
Journal:  Mol Cell Proteomics       Date:  2014-08-19       Impact factor: 5.911

10.  Transmembrane signaling in the sensor kinase DcuS of Escherichia coli: A long-range piston-type displacement of transmembrane helix 2.

Authors:  Christian Monzel; Gottfried Unden
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.