Literature DB >> 25084375

Crystal and solution structure of the human RIG-I SF2 domain.

Tobias Deimling1, Sheng Cui2, Katja Lammens1, Karl-Peter Hopfner1, Gregor Witte1.   

Abstract

RIG-I is a pathogen-recognition receptor that recognizes viral 5'-triphosphates carrying double-stranded RNA. Upon binding to these microbe-associated molecular patterns (MAMPs), RIG-I forms oligomers and promotes downstream processes that result in type I interferon production and induction of an antiviral state. Here, the crystal structure of the human RIG-I superfamily 2 ATPase domain crystallized in an unusually elongated and open conformation is reported. The elongated structure is probably induced in part by crystal packing, but nevertheless indicates that the domain is intrinsically very flexible. This flexibility might allow substantial structural changes upon substrate binding and oligomerization.

Entities:  

Keywords:  RIG-I; SF2 helicase

Mesh:

Substances:

Year:  2014        PMID: 25084375      PMCID: PMC4118797          DOI: 10.1107/S2053230X14012230

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  35 in total

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4.  Integration, scaling, space-group assignment and post-refinement.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

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Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus.

Authors:  Martin Schlee; Andreas Roth; Veit Hornung; Cristina Amparo Hagmann; Vera Wimmenauer; Winfried Barchet; Christoph Coch; Markus Janke; Aleksandra Mihailovic; Greg Wardle; Stefan Juranek; Hiroki Kato; Taro Kawai; Hendrik Poeck; Katherine A Fitzgerald; Osamu Takeuchi; Shizuo Akira; Thomas Tuschl; Eicke Latz; Janos Ludwig; Gunther Hartmann
Journal:  Immunity       Date:  2009-07-02       Impact factor: 31.745

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8.  Structural and functional insights into 5'-ppp RNA pattern recognition by the innate immune receptor RIG-I.

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Review 9.  Cytosolic sensing of viruses.

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Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  3 in total

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Journal:  Nucleic Acids Res       Date:  2014-12-24       Impact factor: 16.971

2.  Structural Analysis of dsRNA Binding to Anti-viral Pattern Recognition Receptors LGP2 and MDA5.

Authors:  Emiko Uchikawa; Mathilde Lethier; Hélène Malet; Joanna Brunel; Denis Gerlier; Stephen Cusack
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3.  Combined roles of ATP and small hairpin RNA in the activation of RIG-I revealed by solution-based analysis.

Authors:  Neelam Shah; Simone A Beckham; Jacqueline A Wilce; Matthew C J Wilce
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