Mohammed Zakaria Slimani1, Petra Bacova2, Marco Bernabei3, Arturo Narros4, Christos N Likos4, Angel J Moreno5. 1. Donostia International Physics Center , Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain. 2. Departamento de Física de Materiales, Universidad del País Vasco (UPV/EHU) , Apartado 1072, E-20080 San Sebastián, Spain ; Materials Physics Center MPC , Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain. 3. Donostia International Physics Center , Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain ; Departament de Fisica Fonamental, Universitat de Barcelona , Martí i Franquès 1, E-08028 Barcelona, Spain. 4. Faculty of Physics, University of Vienna , Boltzmanngasse 5, A-1090 Vienna, Austria. 5. Donostia International Physics Center , Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain ; Materials Physics Center MPC , Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain ; Centro de Física de Materiales (CSIC, UPV/EHU) , Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain.
Abstract
We present computer simulations of concentrated solutions of unknotted nonconcatenated semiflexible ring polymers. Unlike in their flexible counterparts, shrinking involves a strong energetic penalty, favoring interpenetration and clustering of the rings. We investigate the slow dynamics of the centers-of-mass of the rings in the amorphous cluster phase, consisting of disordered columns of oblate rings penetrated by bundles of prolate ones. Scattering functions reveal a striking decoupling of self- and collective motions. Correlations between centers-of-mass exhibit slow relaxation, as expected for an incipient glass transition, indicating the dynamic arrest of the cluster positions. However, self-correlations decay at much shorter time scales. This feature is a manifestation of the fast, continuous exchange and diffusion of the individual rings over the matrix of clusters. Our results reveal a novel scenario of glass formation in a simple monodisperse system, characterized by self-collective decoupling, soft caging, and mild dynamic heterogeneity.
We present computer simulations of concentrated solutions of unknotted nonconcatenated semiflexible ring polymers. Unlike in their flexible counterparts, shrinking involves a strong energetic penalty, favoring interpenetration and clustering of the rings. We investigate the slow dynamics of the centers-of-mass of the rings in the amorphous cluster phase, consisting of disordered columns of oblate rings penetrated by bundles of prolate ones. Scattering functions reveal a striking decoupling of self- and collective motions. Correlations between centers-of-mass exhibit slow relaxation, as expected for an incipient glass transition, indicating the dynamic arrest of the cluster positions. However, self-correlations decay at much shorter time scales. This feature is a manifestation of the fast, continuous exchange and diffusion of the individual rings over the matrix of clusters. Our results reveal a novel scenario of glass formation in a simple monodisperse system, characterized by self-collective decoupling, soft caging, and mild dynamic heterogeneity.
Over the last years, the fascinating
properties of ring polymers have attracted the interest of researchers
in the broad disciplines of physics, chemistry, biophysics, and mathematics.[1−8] The simple operation of joining permanently the two ends of a linear
chain, forming a ring, has a dramatic impact on its structural and
dynamic properties. This includes differences with linear chains in,
e.g., their swelling,[9] rheological,[10] or scaling behavior.[11] Another remarkable effect of the ring topology is the non-Gaussian
character of the effective potential in solution,[12,13] in contrast to the well-known Gaussian potential found for linear
chains.[14]The use of effective potentials
reduces real macromolecular solutions
to effective fluids of ultrasoft, fully penetrable particles.[14−17] This methodology facilitates the investigation of the physical properties
of polymers in solution. The investigation of tunable generic models of ultrasoft particles, inspired by the bounded character
of the real effective interactions in polymer solutions, offers a
route for discovering and designing novel soft matter phases with
potential realizations in real life. For a family of generic models,
the so-called Q±-class,[18,19] in which the Fourier transform of the bounded potential is non positive-definite,
the ultrasoft particles can form clusters. At sufficiently high densities
the fluid transforms into a cluster crystal.[18,19] However, the approach based on effective potentials derived at infinite dilution has severe limitations at high concentrations
due to the emergence of many-body forces arising, e.g., from particle
deformations. This has been recently demonstrated for the case of
flexible ring polymers.[12]In recent
work, some of us have extended the study of ref (12) to the case of semiflexible rings.[20] Unlike
in flexible rings, the presence of intramolecular barriers makes shrinkage
energetically unfavorable. If semiflexible rings are sufficiently
small, their size is only weakly perturbed.[20] This may facilitate interpenetration and promote clustering to fill
the space in dense solutions. This was not the case for very small
rings due to excluded-volume effects or for sufficiently long ones
in which the expected random arrangement of the centers-of-mass was
recovered. However, in a certain range of molecular weight an amorphous
cluster phase was found, consisting of disordered columns of oblate
rings penetrated by bundles of prolate rings (see Figures 12 and 13
in ref (20)). This
novel cluster phase emerges in a real, one-component, polymer solution with purely repulsive interactions.[20] This finding is crucially different from other
soft matter cluster phases where clustering is mediated by short-range
attraction and long-range repulsion.[21] Although
clustering of the rings was predicted by the obtained effective potential,
the anisotropic character of the real clusters was not captured by
the isotropic effective interaction, which did not
incorporate the relative orientation between rings as an additional,
relevant degree of freedom.[20]Recent
simulations of a polydisperse (preventing crystallization)
generic fluid of ultrasoft, purely repulsive particles of the Q±-class have revealed the possibility of
forming a cluster glass.[22] Whether this dynamic scenario may find a realization in a real polymer
solution is an open question. Apart from the eventual inaccuracy of
the ultrasoft potentials to describe real structural correlations
at high concentrations (see above), predictions on the dynamics can
be misleading. Even by using the correct mean-force potential describing
exactly the static correlations, the real dynamics can be strongly
influenced by the so-called transient forces,[23] related to the removed intramolecular degrees of freedom and not
captured by the mean-force potential.Motivated by the emergence
of the anisotropic cluster state in
dense solutions of semiflexible rings, in this letter we investigate
the associated dynamics in this phase. We find a striking decoupling
of self- and collective motions. As expected for an incipient glass
transition, correlations between centers-of-mass exhibit slow relaxation,
reflecting the dynamic arrest of the cluster positions. However, self-correlations
relax at much shorter time scales. This feature is a manifestation
of the fast, continuous exchange and diffusion of the individual rings
over the quasi-static matrix of clusters. Our results reveal a novel
dynamic scenario for glass formation in a real, simple monodisperse
system, characterized by the simultaneous presence of self-collective
decoupling, soft caging, and mild dynamic heterogeneity.We
simulate NR = 1600 unknotted nonconcatenated
bead–spring rings of N = 50 monomers. We use
the monomer excluded-volume and bonding potentials of the Kremer–Grest
model,[24] and implement bending stiffness.[20] We investigate the density dependence of the
dynamics at fixed temperature T = 1 (in units of
the model[20,24]). Model and simulation details are extensively
described in ref (20) (here we use a friction γ = 2, instead of γ = 0.5 used
in ref (20) for efficiency
of equilibration). From simulations without excluded volume of the
linear counterparts,[25] we have estimated
a characteristic ratio[26]C∞ ∼ 15. This is a value typical of common
stiff polymers.[26] By simple scaling, we
expect to find similar trends for biopolymers (C∞ ∼ 100) if we use a similar ratio N/C∞. Moreover, since a bead in
our model can be understood as a coarse-grained scale, our results
are expected to be valid for more complex systems such as, e.g., toroidal
microrings or cyclic polymer brushes, which can be currently synthesized.[27,28]By focusing on the structure and dynamics of the centers-of-mass
of the rings, we use the average diameter of gyration at infinite
dilution, Dg0, to normalize the density
of the ring solution. Thus, we define the density as ρ = NR(L/Dg0)−3, with L being the
simulation box length. For N = 50 we find Dg0 = 13σ, with σ = 1 as the monomer
size.[20] We explored a concentration range
from ρ → 0 to ρ = 20. The value ρ = 20 corresponds
to a monomer density of ρm = 0.45, about half the
melt density in similar bead–spring models.[24]Figure S1 in the Supporting Information shows results for the radial distribution function g(R) of the centers-of-mass of the rings, at different
densities. Clustering at high densities is evidenced by the increasing
maximum of g(R) at zero distance.
Figure 1 shows results for the static structure
factor of the centers-of-mass, S(q) = NR–1⟨∑ exp[iq·(R(0) – R(0))]⟩,
with R denoting positions
of the centers-of-mass. By increasing the concentration, S(q) develops a sharp maximum at wavevector qmax ∼ 0.4. This corresponds to a typical
distance between centers-of-mass of d ∼ 2π/qmax ∼ 16. This is slightly higher than
the typical diameter of gyration in the whole investigated density
range (12.4 < Dg < 13.6).[20] In simple liquids the main peak is followed
by a pronounced minimum S(qmin) < 1 and higher-order harmonics.[29] Instead, we find a nearly featureless, smoothly decaying
shoulder extending up to large q-values. This reflects
the full interpenetrability of the rings at short distances. The inset
of Figure 1 shows the peak height S(qmax) (squares) versus the density.
The slope of S(qmax)
exhibits a sharp crossover at ρ ∼ 10. We identify this
feature as the onset of the cluster phase. The maximum of S(q) exhibits remarkable features. Thus,
it reaches values of up to S(qmax) ∼ 20 at the highest investigated densities. However,
these are not accompanied by crystallization, as would be expected
by the Hansen–Verlet criterion for simple liquids.[30] Although the effective potential does not fully
capture all details of the cluster structure (in particular its anisotropic
character[20]), Figure 1 reveals a key feature of cluster-forming fluids of fully penetrable
objects.[18,19] Namely, the wavevector qmax ∼ 0.4 for the maximum of S(q) (circles in the inset) is essentially density-independent
in the cluster phase. Thus, adding rings to the system does not modify
the distance between clusters (d ∼ 2π/qmax) but just their population.[18,19]
Figure 1
Static
structure factor S(q)
of the centers-of-mass (main panel), for different densities (see
legend). Data are represented vs the reduced wavevector qDg0. The inset shows the density dependence of qmax (circles) and S(qmax) (squares), where qmax is the absolute wavevector at the maximum of S(q). Both qmax and S(qmax) are estimated by fitting
the main peak to a Gaussian. The corresponding error bars are smaller
than the symbol sizes in the inset.
Static
structure factor S(q)
of the centers-of-mass (main panel), for different densities (see
legend). Data are represented vs the reduced wavevector qDg0. The inset shows the density dependence of qmax (circles) and S(qmax) (squares), where qmax is the absolute wavevector at the maximum of S(q). Both qmax and S(qmax) are estimated by fitting
the main peak to a Gaussian. The corresponding error bars are smaller
than the symbol sizes in the inset.Now we investigate the slow dynamics of the rings in the
cluster
phase. In standard molecular and colloidal fluids close to a glass
transition,[31] particles can be mutually
trapped by their neighbors over several time decades. This is the
well-known caging effect, which leads to a plateau in the mean-squared
displacement (MSD, ⟨Δr2⟩)
versus time t. The temporal extent of the caging
regime increases on approaching the glass transition (usually by increasing
density and/or decreasing temperature). At longer times, particles
escape from the cage and reach the diffusive regime ⟨Δr2⟩ ∝ t. Figure 2a shows the MSD of the centers-of-mass at different
densities up to the highest investigated one. Data are normalized
by Dg02 to show displacements in terms of the typical ring size.
In all cases, displacements at the end of the simulation correspond
to several times the ring size. Within the investigated concentration
range, no plateau is found in the MSD. A soft caging effect is observed,
which is manifested as an apparent subdiffusive regime ⟨Δr2⟩ ∼ t, with x < 1 decreasing by increasing
concentration. The crossover to diffusive behavior is found, in most
cases, when displacements approach the typical ring size, ⟨Δr2⟩ ≲ Dg02. However, this
is not the case for the highest investigated density ρ = 20,
where a crossover to an apparent second subdiffusive regime is found,
persisting at least up to values of ⟨Δr2⟩ = 5Dg02. The eventual crossover to diffusion
is beyond the simulation time scale.
Figure 2
(a) MSD of the centers-of-mass (solid
lines), normalized by Dg02, for different densities (see legend).
Dashed lines describe approximate
power-law behavior ∼ t (exponents given in the panel). (b) Density dependence of
the diffusivity, D, and inverse relaxation times,
τ–1. Some typical error bars are given. Closed
circles: D normalized by Dg02. Open symbols:
τ–1 for the coherent (squares) and incoherent
(triangles) scattering functions at q = 0.39. Left
and right ordinate axes correspond to data of D/Dg02 and τ–1, respectively. Both ordinate axes
span over the same factor 2 × 104 for a fair comparison
between different data sets. The dashed lines indicate apparent exponential
dependence D, τ–1 ∼
exp(−Γρ). Values of Γ are given in the panel.
(a) MSD of the centers-of-mass (solid
lines), normalized by Dg02, for different densities (see legend).
Dashed lines describe approximate
power-law behavior ∼ t (exponents given in the panel). (b) Density dependence of
the diffusivity, D, and inverse relaxation times,
τ–1. Some typical error bars are given. Closed
circles: D normalized by Dg02. Open symbols:
τ–1 for the coherent (squares) and incoherent
(triangles) scattering functions at q = 0.39. Left
and right ordinate axes correspond to data of D/Dg02 and τ–1, respectively. Both ordinate axes
span over the same factor 2 × 104 for a fair comparison
between different data sets. The dashed lines indicate apparent exponential
dependence D, τ–1 ∼
exp(−Γρ). Values of Γ are given in the panel.Figure 2b shows the density dependence of
the diffusivity, D, of the centers-of-mass of the
rings. This is determined as the long-time limit of ⟨Δr2⟩/6t, for the densities
at which the linear regime ⟨Δr2⟩ ∝ t is reached within the simulation
time scale. A sharp dynamic crossover is found at ρ ∼
10, i.e., around the density for the onset of the cluster phase (Figure 1). This crossover is characterized by a much stronger
density dependence of the diffusivity in the cluster phase (ρ
> 10) and, as we discuss below, a decoupling of self- and collective
motions. In the investigated density range of the cluster phase, we
find an apparent exponential law D ∼ exp(−0.35ρ),
which may suggest activated dynamics. Still, this conclusion must
be taken with care because of the limited range of observation (one
decade in diffusivity).Further insight into the dynamics can
be obtained by computing
scattering functions of the centers-of-mass. Normalized coherent and
incoherent functions are defined as Fcoh(q,t) = [NRS(q)]−1⟨∑ exp[iq·(R(t) – R(0))]⟩
and Finc(q,t) = NR–1⟨∑ exp[iq·(R(t) – R(0))]⟩, respectively. Coherent functions probe pair
correlations between centers-of-mass of the rings, whereas incoherent
functions probe self-correlations. Figure 3a shows results for both functions at the highest investigated density
ρ = 20 and for several representative wavevectors. Comparison
between data sets reveals an unusual result: the incoherent functions
relax in much shorter time scales than their coherent counterparts.
Only in the limit of large wavevectors q ≫ qmax, where no collective correlations are really
probed, both functions trivially approach each other. We illustrate
this effect by representing, for ρ = 20, the q-dependence of the relaxation times τ of the scattering functions
(see Figure S2 in the Supporting Information). These are defined as the times for which Fcoh,inc(q,τ) = e–1. Figure 3b shows, for fixed
wavevector q = 0.39 ≈ qmax, coherent and incoherent scattering functions at several
densities. In Figure 2b we show the density
dependence of the respective inverse relaxation times, τcoh,inc–1.
As can be seen, the time scale separation between coherent and incoherent
functions is associated with the onset of the cluster phase at ρ
∼ 10 and becomes more pronounced by increasing the density.
Within the whole investigated range, the incoherent inverse relaxation
times follow the same density dependence as the diffusivity (note
that both ordinate axes in Figure 2b span over
the same factor 2 × 104 for a fair comparison between
different data sets). In the cluster phase the inverse coherent times
follow a much stronger dependence, with an apparent activation energy
of about twice that of the diffusivity and incoherent inverse time.
Figure 3
Scattering
functions for the centers-of-mass of the rings. Symbols
and lines correspond to coherent and incoherent functions, respectively.
(a) Results for the highest investigated ρ = 20 and different q-values. (b) Results for fixed q = 0.39
≈ qmax and different densities.
In each panel, two data sets with identical colors correspond to the
coherent (symbols) and incoherent (line) function for the same value
of q (in panel (a)) or ρ (in panel (b)); see
legends.
Figure 3 demonstrates that collective correlations
slow down by increasing density, reflecting the arrest of the cluster
positions. This is the signature of an incipient glass transition.
However, unlike in simple glass formers, this is not accompanied by
a similar arrest of the self-motions, which exhibit a much faster
relaxation. This reflects that fast, continuous exchange and diffusion
of the rings takes place over the slowly relaxing matrix of clusters.
This is consistent with the soft character of the caging regime in
the MSD (Figure 2a). As discussed in ref (20), clusters are not formed
in the limit of small and large rings. In Figure S3 of the Supporting Information we show results for g(R) and S(q) in the former two limits of noncluster forming rings (highest investigated
densities for N = 20 and 100 in ref (20)). Figure S4 of the Supporting Information shows the corresponding
scattering functions. No decoupling is observed there. This further
supports the intimate relation between the formation of the cluster
phase and the decoupling of self- and collective motions. The small
differences between coherent and incoherent functions in the noncluster
forming systems can be roughly understood by simple de Gennes narrowing,[29] τcoh/τinc ∼ S(q) (see Figure S5 in the Supporting Information). This is clearly not
the case in the cluster phase (see Figure 4), confirming the highly nontrivial nature of the observed decoupling.
Figure 4
For the highest investigated density ρ
= 20, q-dependence of the ratio of the coherent to
the incoherent relaxation
time (full black circles) and static structure factor of the centers-of-mass
(thick red lines).
The dynamic scenario observed for real semiflexible
rings, in the cluster phase, exhibits strong similarities with results
in cluster glass-forming fluids of generic fully
penetrable ultrasoft particles.[22] These
include the crossover in the diffusivity to apparent activated behavior
and the decoupling between coherent and incoherent dynamics in the
cluster phase. Interestingly, the scenario observed for the semiflexible
rings also has analogies with the dynamics in two-component systems
with very strong dynamic asymmetry[32−34] and more generally in
crowded environments,[35] even if clustering
and penetrable (“ultrasoft”) character may be absent
in such systems.[32,33] Subdiffusive regimes in the MSD
of the fast particles are usually observed in such mixtures, extending
up to distances much larger than the particle size. The trend in Figure 2a for ρ = 20 resembles this feature. Decoupling
of self- and collective dynamics in the mentioned mixtures is found
for the fast component (“tracer”). The tracers perform
large-scale fast diffusion along paths spanning over the confining
matrix (formed by the slow component). Because of the slowly relaxing
character of the matrix and the paths, collective correlations between
the tracers decay in a much slower fashion than the self-correlations.[32−34]Scattering
functions for the centers-of-mass of the rings. Symbols
and lines correspond to coherent and incoherent functions, respectively.
(a) Results for the highest investigated ρ = 20 and different q-values. (b) Results for fixed q = 0.39
≈ qmax and different densities.
In each panel, two data sets with identical colors correspond to the
coherent (symbols) and incoherent (line) function for the same value
of q (in panel (a)) or ρ (in panel (b)); see
legends.For the highest investigated density ρ
= 20, q-dependence of the ratio of the coherent to
the incoherent relaxation
time (full black circles) and static structure factor of the centers-of-mass
(thick red lines).The results presented
here for cluster-forming semiflexible rings
constitute a novel realization of this decoupling
scenario. First, it takes place in a real monodisperse system. This feature is intimately connected to the fully penetrable
character of the rings, which can behave both as fast “tracers”
moving from one cluster to other and as part of the slow “matrix”
formed by the cluster structure. Second, it is not connected to the
presence of strong dynamic heterogeneities, unlike in the mentioned
dynamically asymmetric mixtures[32−34] where a clear distinction between
“fast” and “slow” particles exists. One
might still think of a small fraction of rings performing much faster
dynamics than the average, as a sort of “defect diffusion”.
If this were the case the van Hove self-correlation function Gs(r,t) of
the centers-of-mass would show, at long times, a strongly localized
sharp main peak (owing to the majority slow rings), plus a secondary
unlocalized peak or a broad tail corresponding to the minority fraction
of fast rings. Figure 5 displays Gs(r,t) (symbols) for
ρ = 20. This shows a smooth evolution with time. For comparison
we include the results for simple Gaussian functions (lines) with
the same values of ⟨Δr2(t)⟩. Even in the most non-Gaussian case (t = 106), no putative division into two subpopulations
of minority “fast” and majority “slow”
rings can be made. Data in Figure 5 correspond
to the usual representation of the van Hove function, which gives
more weight to the fastest particles. Figure S6 in the Supporting Information shows the same data in
the representation proposed in e.g., refs (36 and 37), which gives more weight to the
slowest particles. Similar conclusions can be established: no putative
division into subpopulations of “fast” and “slow”
rings can be made. This is further corroborated by the fact that the
diffusivity and the inverse incoherent time feature the same density
dependence (Figure 2b). This is not the case
in systems with strong dynamic heterogeneity, in which diffusivities
and relaxation times are dominated by fast and slow particles, respectively.
In conclusion, dynamic heterogeneity in the cluster phase of the rings
is “mild”, as opposed to the strong dynamic heterogeneity
characteristic of dynamically asymmetric mixtures.[32−34]
Figure 5
Van Hove self-correlation function of the centers-of-mass, for N = 50, ρ = 20, and at different selected times. The
functions are multiplied by the phase factor 4πr2 to represent the normalized distribution of displacements.
Symbols are simulation data. Lines are calculated by using Gaussian
functions, Gs(r,t) = (3/2π⟨r2(t)⟩)3/2 exp[−3r2/2⟨r2(t)⟩], with ⟨r2(t)⟩ being the mean-squared displacement obtained from the simulation.
As shown
in ref (20), the cluster
phase is formed by two subpopulations of rings with
very different shape. The clusters consist of disordered columns of
oblate rings (prolateness parameter p → −1)
penetrated by bundles of elongated, prolate rings (p → 1). It might still be argued that the initial prolateness
of the ring plays a significant role in its ulterior (fast or slow)
dynamics. We find that this is not the case either. We have divided
the rings into different sets according to their p-values at t = 0. Figure S7 in the Supporting Information displays the MSD, at ρ = 20,
for several sets covering the whole p-range. Very
weak differences are observed between the different sets. The most
prolate rings are somewhat faster at early times, suggesting some
enhanced longitudinal motion of the elongated bundles. However, all
sets collapse for displacements smaller than the ring size. In summary,
the former results indicate that all rings participate in a similar
fashion, via continuous exchange between clusters, in the relaxation
of the self-correlations, without any clear distinction between fast
and slow subpopulations. This fast mechanism weakly alters the cluster
structure, which relaxes at much longer time scales, leading to incoherent–coherent
decoupling.Van Hove self-correlation function of the centers-of-mass, for N = 50, ρ = 20, and at different selected times. The
functions are multiplied by the phase factor 4πr2 to represent the normalized distribution of displacements.
Symbols are simulation data. Lines are calculated by using Gaussian
functions, Gs(r,t) = (3/2π⟨r2(t)⟩)3/2 exp[−3r2/2⟨r2(t)⟩], with ⟨r2(t)⟩ being the mean-squared displacement obtained from the simulation.Although special techniques for
the synthesis of pure rings have
been developed,[1] the usual, high-throughput
approaches inadvertently result in the presence of residual linear
chains.[10] Having noted this, the qualitative
picture observed here for the dynamics of the pure rings will not
be affected. We performed additional simulations of a symmetric mixture
of rings and linear counterparts of identical N =
50 (results will be presented elsewhere). Though for identical total
densities less pronounced effects are observed, we anticipate that
the rings in the mixture exhibit all the qualitative trends found
for the pure system.In summary, we have characterized slow
dynamics in the amorphous
cluster phase of a concentrated solution of unknotted nonconcatenated
semiflexible rings. Our results reveal a novel dynamic scenario for
glass formation in a real, simple monodisperse system, characterized
by the simultaneous presence of self- and collective decoupling, soft
caging, and mild dynamic heterogeneity.
Authors: Frédéric Cardinaux; Emanuela Zaccarelli; Anna Stradner; Saskia Bucciarelli; Bela Farago; Stefan U Egelhaaf; Francesco Sciortino; Peter Schurtenberger Journal: J Phys Chem B Date: 2011-04-29 Impact factor: 2.991