Literature DB >> 25079137

Phylogeny of suckermouth catfishes (Mochokidae: Chiloglanis) from Kenya: the utility of Growth Hormone introns in species level phylogenies.

Ray C Schmidt1, Henry L Bart2, Dorothy Wanja Nyingi3, Nathan Ndegwa Gichuki4.   

Abstract

African suckermouth catfishes (Mochokidae: Chiloglanis) occur in freshwater throughout tropical Africa. Specimens from all major drainages across Kenya were collected over three field seasons. Here we present a phylogeny inferred from both mitochondrial cytochrome b (cyt b) and introns of the nuclear Growth Hormone gene (GH). The phylogeny inferred from introns is largely congruent with the results from an analysis of cyt b. The length and variability of GH introns make them ideal species level nuclear markers without the problem of introgression commonly encountered with mitochondrial genes. This analysis confirmed the presence of two previously known undescribed Chiloglanis species and also suggests the presence of previously unknown diversity within the Athi River system. The resulting phylogeny also indicates the presence of two separate lineages within C. brevibarbis. The historical biogeography of Chiloglanis within Kenya is discussed. The utility of GH intron for species level phylogenies of Siluriformes is compared to that in other groups.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  East Africa; Gap coding; Nuclear markers

Mesh:

Substances:

Year:  2014        PMID: 25079137     DOI: 10.1016/j.ympev.2014.07.011

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  4 in total

1.  Ecological speciation by temporal isolation in a population of the stonefly Leuctra hippopus (Plecoptera, Leuctridae).

Authors:  Louis Boumans; Silje Hogner; John Brittain; Arild Johnsen
Journal:  Ecol Evol       Date:  2017-02-10       Impact factor: 2.912

2.  Evidence of hidden diversity and taxonomic conflicts in five stream fishes from the Eastern Zimbabwe Highlands freshwater ecoregion.

Authors:  Albert Chakona; Wilbert T Kadye; Taurai Bere; Daniel N Mazungula; Emmanuel Vreven
Journal:  Zookeys       Date:  2018-06-19       Impact factor: 1.546

3.  New phylogenetic insights into the African catfish families Mochokidae and Austroglanididae.

Authors:  Frederic D B Schedel; Albert Chakona; Brian L Sidlauskas; Michael O Popoola; Nadine Usimesa Wingi; Dirk Neumann; Emmanuel J W M N Vreven; Ulrich K Schliewen
Journal:  J Fish Biol       Date:  2022-03-09       Impact factor: 2.504

4.  CD163 as a novel target gene of STAT3 is a potential therapeutic target for gastric cancer.

Authors:  Zhenguo Cheng; Danhua Zhang; Baocheng Gong; Pengliang Wang; Funan Liu
Journal:  Oncotarget       Date:  2017-08-14
  4 in total

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