Literature DB >> 25077431

Analysing Twitter and web queries for flu trend prediction.

José Carlos Santos, Sérgio Matos.   

Abstract

BACKGROUND: Social media platforms encourage people to share diverse aspects of their daily life. Among these, shared health related information might be used to infer health status and incidence rates for specific conditions or symptoms. In this work, we present an infodemiology study that evaluates the use of Twitter messages and search engine query logs to estimate and predict the incidence rate of influenza like illness in Portugal.
RESULTS: Based on a manually classified dataset of 2704 tweets from Portugal, we selected a set of 650 textual features to train a Naïve Bayes classifier to identify tweets mentioning flu or flu-like illness or symptoms. We obtained a precision of 0.78 and an F-measure of 0.83, based on cross validation over the complete annotated set. Furthermore, we trained a multiple linear regression model to estimate the health-monitoring data from the Influenzanet project, using as predictors the relative frequencies obtained from the tweet classification results and from query logs, and achieved a correlation ratio of 0.89 (p<0.001). These classification and regression models were also applied to estimate the flu incidence in the following flu season, achieving a correlation of 0.72.
CONCLUSIONS: Previous studies addressing the estimation of disease incidence based on user-generated content have mostly focused on the english language. Our results further validate those studies and show that by changing the initial steps of data preprocessing and feature extraction and selection, the proposed approaches can be adapted to other languages. Additionally, we investigated whether the predictive model created can be applied to data from the subsequent flu season. In this case, although the prediction result was good, an initial phase to adapt the regression model could be necessary to achieve more robust results.

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Year:  2014        PMID: 25077431      PMCID: PMC4108891          DOI: 10.1186/1742-4682-11-S1-S6

Source DB:  PubMed          Journal:  Theor Biol Med Model        ISSN: 1742-4682            Impact factor:   2.432


  9 in total

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Journal:  Am J Trop Med Hyg       Date:  2012-01       Impact factor: 2.345

2.  Comparison of web-based biosecurity intelligence systems: BioCaster, EpiSPIDER and HealthMap.

Authors:  A Lyon; M Nunn; G Grossel; M Burgman
Journal:  Transbound Emerg Dis       Date:  2011-12-20       Impact factor: 5.005

3.  Infodemiology: tracking flu-related searches on the web for syndromic surveillance.

Authors:  Gunther Eysenbach
Journal:  AMIA Annu Symp Proc       Date:  2006

4.  Dissemination of health information through social networks: twitter and antibiotics.

Authors:  Daniel Scanfeld; Vanessa Scanfeld; Elaine L Larson
Journal:  Am J Infect Control       Date:  2010-04       Impact factor: 2.918

5.  Pandemics in the age of Twitter: content analysis of Tweets during the 2009 H1N1 outbreak.

Authors:  Cynthia Chew; Gunther Eysenbach
Journal:  PLoS One       Date:  2010-11-29       Impact factor: 3.240

6.  Infodemiology and infoveillance: framework for an emerging set of public health informatics methods to analyze search, communication and publication behavior on the Internet.

Authors:  Gunther Eysenbach
Journal:  J Med Internet Res       Date:  2009-03-27       Impact factor: 5.428

7.  Detecting influenza epidemics using search engine query data.

Authors:  Jeremy Ginsberg; Matthew H Mohebbi; Rajan S Patel; Lynnette Brammer; Mark S Smolinski; Larry Brilliant
Journal:  Nature       Date:  2009-02-19       Impact factor: 49.962

8.  The use of Twitter to track levels of disease activity and public concern in the U.S. during the influenza A H1N1 pandemic.

Authors:  Alessio Signorini; Alberto Maria Segre; Philip M Polgreen
Journal:  PLoS One       Date:  2011-05-04       Impact factor: 3.240

Review 9.  Scoping review on search queries and social media for disease surveillance: a chronology of innovation.

Authors:  Theresa Marie Bernardo; Andrijana Rajic; Ian Young; Katie Robiadek; Mai T Pham; Julie A Funk
Journal:  J Med Internet Res       Date:  2013-07-18       Impact factor: 5.428

  9 in total
  14 in total

1.  HARNESSING SOCIAL MEDIA FOR HEALTH INFORMATION MANAGEMENT.

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Journal:  Electron Commer Res Appl       Date:  2017-12-29       Impact factor: 6.014

2.  An Online Risk Index for the Cross-Sectional Prediction of New HIV Chlamydia, and Gonorrhea Diagnoses Across U.S. Counties and Across Years.

Authors:  Man-Pui Sally Chan; Sophie Lohmann; Alex Morales; Chengxiang Zhai; Lyle Ungar; David R Holtgrave; Dolores Albarracín
Journal:  AIDS Behav       Date:  2018-07

3.  Age-related differences in the accuracy of web query-based predictions of influenza-like illness.

Authors:  Alexander Domnich; Donatella Panatto; Alessio Signori; Piero Luigi Lai; Roberto Gasparini; Daniela Amicizia
Journal:  PLoS One       Date:  2015-05-26       Impact factor: 3.240

4.  Correlation between National Influenza Surveillance Data and Search Queries from Mobile Devices and Desktops in South Korea.

Authors:  Soo-Yong Shin; Taerim Kim; Dong-Woo Seo; Chang Hwan Sohn; Sung-Hoon Kim; Seung Mok Ryoo; Yoon-Seon Lee; Jae Ho Lee; Won Young Kim; Kyoung Soo Lim
Journal:  PLoS One       Date:  2016-07-08       Impact factor: 3.240

Review 5.  Web-based infectious disease surveillance systems and public health perspectives: a systematic review.

Authors:  Jihye Choi; Youngtae Cho; Eunyoung Shim; Hyekyung Woo
Journal:  BMC Public Health       Date:  2016-12-08       Impact factor: 3.295

6.  Measuring Audience Engagement for Public Health Twitter Chats: Insights From #LiveFitNOLA.

Authors:  Kristina M Rabarison; Naomi K Englar; Connie L Bish; Shelbi M Flynn; Carolyn C Johnson; Merriah A Croston
Journal:  JMIR Public Health Surveill       Date:  2017-06-08

Review 7.  Identifying Methods for Monitoring Foodborne Illness: Review of Existing Public Health Surveillance Techniques.

Authors:  Rachel A Oldroyd; Michelle A Morris; Mark Birkin
Journal:  JMIR Public Health Surveill       Date:  2018-06-06

Review 8.  The potential use of social media and other internet-related data and communications for child maltreatment surveillance and epidemiological research: Scoping review and recommendations.

Authors:  Laura M Schwab-Reese; Wendy Hovdestad; Lil Tonmyr; John Fluke
Journal:  Child Abuse Negl       Date:  2018-02-01

9.  Advances in bioinformatics and biomedical engineering--special issue of IWBBIO 2013.

Authors:  Francisco M Ortuño; Ignacio Rojas
Journal:  Theor Biol Med Model       Date:  2014-05-07       Impact factor: 2.432

Review 10.  A review of influenza detection and prediction through social networking sites.

Authors:  Ali Alessa; Miad Faezipour
Journal:  Theor Biol Med Model       Date:  2018-02-01       Impact factor: 2.432

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