Literature DB >> 25074800

Hydrogen-hydrogen interaction in planar biphenyl: a theoretical study based on the interacting quantum atoms and Hirshfeld atomic energy partitioning methods.

Kiamars Eskandari1, Christian Van Alsenoy.   

Abstract

The nature of H-H interaction between ortho-hydrogen atoms in planar biphenyl is investigated by two different atomic energy partitioning methods, namely fractional occupation iterative Hirshfeld (FOHI) and interacting quantum atoms (IQA), and compared with the traditional virial-based approach of quantum theory of atoms in molecules (QTAIM). In agreement with Bader's hypothesis of H-H bonding, partitioning the atomic energy into intra-atomic and interatomic terms reveals that there is a net attractive interaction between the ortho-hydrogens in the planar biphenyl. This falsifies the classical view of steric repulsion between the hydrogens. In addition, in contrast to the traditional QTAIM energy analysis, both FOHI and IQA show that the total atomic energy of the ortho-hydrogens remains almost constant when they participate in the H-H interaction. Although, the interatomic part of atomic energy of the hydrogens plays a stabilizing role during the formation of the H-H bond, it is almost compensated by the destabilizing effects of the intra-atomic parts and consequently, the total energy of the hydrogens remains constant. The trends in the changes of intra-atomic and interatomic energy terms of ortho-hydrogens during H-H bond formation are very similar to those observed for the H2 molecule.
Copyright © 2014 Wiley Periodicals, Inc.

Entities:  

Keywords:  chemical bond • ab initio • gas phase

Year:  2014        PMID: 25074800     DOI: 10.1002/jcc.23698

Source DB:  PubMed          Journal:  J Comput Chem        ISSN: 0192-8651            Impact factor:   3.376


  11 in total

1.  Computational study of the interaction between NO, NO+, and NO- with H2O.

Authors:  Renato P Orenha; Letícia R San Gregorio; Sérgio E Galembeck
Journal:  J Mol Model       Date:  2016-10-26       Impact factor: 1.810

2.  Unfavorable regions in the ramachandran plot: Is it really steric hindrance? The interacting quantum atoms perspective.

Authors:  Peter I Maxwell; Paul L A Popelier
Journal:  J Comput Chem       Date:  2017-08-25       Impact factor: 3.376

3.  An interacting quantum atom study of model SN 2 reactions (X- ···CH3 X, X = F, Cl, Br, and I).

Authors:  Ibon Alkorta; Joseph C R Thacker; Paul L A Popelier
Journal:  J Comput Chem       Date:  2017-11-10       Impact factor: 3.376

4.  Using the Relative Energy Gradient Method with Interacting Quantum Atoms to Determine the Reaction Mechanism and Catalytic Effects in the Peptide Hydrolysis in HIV-1 Protease.

Authors:  Joseph C R Thacker; Mark A Vincent; Paul L A Popelier
Journal:  Chemistry       Date:  2018-07-03       Impact factor: 5.236

5.  Does the Intra-Atomic Deformation Energy of Interacting Quantum Atoms Represent Steric Energy?

Authors:  Benjamin C B Symons; Dominic J Williamson; Campbell M Brooks; Alex L Wilson; Paul L A Popelier
Journal:  ChemistryOpen       Date:  2019-02-08       Impact factor: 2.911

6.  Aromaticity Determines the Relative Stability of Kinked vs. Straight Topologies in Polycyclic Aromatic Hydrocarbons.

Authors:  Jordi Poater; Miquel Duran; Miquel Solà
Journal:  Front Chem       Date:  2018-11-20       Impact factor: 5.221

7.  The ANANKE relative energy gradient (REG) method to automate IQA analysis over configurational change.

Authors:  Joseph C R Thacker; Paul L A Popelier
Journal:  Theor Chem Acc       Date:  2017-07-05       Impact factor: 1.702

8.  Elucidating the intercalation of methylated 1,10-phenanthroline with DNA: the important weight of the CH/H interactions and the selectivity of CH/π and CH/n interactions.

Authors:  Ángel Sánchez-González; Adrià Gil
Journal:  RSC Adv       Date:  2021-01-05       Impact factor: 3.361

9.  Realistic sampling of amino acid geometries for a multipolar polarizable force field.

Authors:  Timothy J Hughes; Salvatore Cardamone; Paul L A Popelier
Journal:  J Comput Chem       Date:  2015-08-03       Impact factor: 3.376

Review 10.  Interacting Quantum Atoms-A Review.

Authors:  José Manuel Guevara-Vela; Evelio Francisco; Tomás Rocha-Rinza; Ángel Martín Pendás
Journal:  Molecules       Date:  2020-09-03       Impact factor: 4.411

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