Literature DB >> 25074278

How the proteome packages the genome for cardiovascular development.

Elaheh Karbassi1, Thomas M Vondriska.   

Abstract

The devastating impact of congenital heart defects has made mechanisms of vertebrate heart and vascular development an active area of study. Because myocyte death is a common feature of acquired cardiovascular diseases and the adult heart does not regenerate, the need exists to understand whether features of the developing heart and vasculature-which are more plastic-can be exploited therapeutically in the disease setting. We know that a core network of transcription factors governs commitment to the cardiovascular lineage, and recent studies using genetic loss-of-function approaches and unbiased genomic studies have revealed the role for various chromatin modulatory events. We reason that chromatin structure itself is a causal feature that influences transcriptome complexity along a developmental continuum, and the purpose of this article is to highlight the areas in which 'omics technologies have the potential to reveal new principles of phenotypic plasticity in development. We review the major mechanisms of chromatin structural regulation, highlighting what is known about their actions to control cardiovascular differentiation. We discuss emergent mechanisms of regulation that have been identified on the basis of genomic and proteomic studies of cardiac nuclei and identify current challenges to an integrated understanding of chromatin structure and cardiovascular phenotype.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Chromatin; Epigenetics; Genomics; Heart; Systems biology; Vasculature

Mesh:

Substances:

Year:  2014        PMID: 25074278      PMCID: PMC4270204          DOI: 10.1002/pmic.201400131

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  128 in total

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6.  Polybromo protein BAF180 functions in mammalian cardiac chamber maturation.

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Authors:  Menno P Creyghton; Styliani Markoulaki; Stuart S Levine; Jacob Hanna; Michael A Lodato; Ky Sha; Richard A Young; Rudolf Jaenisch; Laurie A Boyer
Journal:  Cell       Date:  2008-11-06       Impact factor: 41.582

8.  A crucial role of a high mobility group protein HMGA2 in cardiogenesis.

Authors:  Koshiro Monzen; Yuzuru Ito; Atsuhiko T Naito; Hiroki Kasai; Yukio Hiroi; Doubun Hayashi; Ichiro Shiojima; Tsutomu Yamazaki; Kohei Miyazono; Makoto Asashima; Ryozo Nagai; Issei Komuro
Journal:  Nat Cell Biol       Date:  2008-04-20       Impact factor: 28.824

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Authors:  Phillip Grote; Lars Wittler; David Hendrix; Frederic Koch; Sandra Währisch; Arica Beisaw; Karol Macura; Gaby Bläss; Manolis Kellis; Martin Werber; Bernhard G Herrmann
Journal:  Dev Cell       Date:  2013-01-28       Impact factor: 12.270

10.  Histone h1 depletion impairs embryonic stem cell differentiation.

Authors:  Yunzhe Zhang; Marissa Cooke; Shiraj Panjwani; Kaixiang Cao; Beth Krauth; Po-Yi Ho; Magdalena Medrzycki; Dawit T Berhe; Chenyi Pan; Todd C McDevitt; Yuhong Fan
Journal:  PLoS Genet       Date:  2012-05-10       Impact factor: 5.917

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