Literature DB >> 25071959

Analysis of macular OCT images using deformable registration.

Min Chen1, Andrew Lang2, Howard S Ying3, Peter A Calabresi4, Jerry L Prince2, Aaron Carass2.   

Abstract

Optical coherence tomography (OCT) of the macula has become increasingly important in the investigation of retinal pathology. However, deformable image registration, which is used for aligning subjects for pairwise comparisons, population averaging, and atlas label transfer, has not been well-developed and demonstrated on OCT images. In this paper, we present a deformable image registration approach designed specifically for macular OCT images. The approach begins with an initial translation to align the fovea of each subject, followed by a linear rescaling to align the top and bottom retinal boundaries. Finally, the layers within the retina are aligned by a deformable registration using one-dimensional radial basis functions. The algorithm was validated using manual delineations of retinal layers in OCT images from a cohort consisting of healthy controls and patients diagnosed with multiple sclerosis (MS). We show that the algorithm overcomes the shortcomings of existing generic registration methods, which cannot be readily applied to OCT images. A successful deformable image registration algorithm for macular OCT opens up a variety of population based analysis techniques that are regularly used in other imaging modalities, such as spatial normalization, statistical atlas creation, and voxel based morphometry. Examples of these applications are provided to demonstrate the potential benefits such techniques can have on our understanding of retinal disease. In particular, included is a pilot study of localized volumetric changes between healthy controls and MS patients using the proposed registration algorithm.

Entities:  

Keywords:  (100.0100) Image processing; (170.4470) Ophthalmology; (170.4500) Optical coherence tomography

Year:  2014        PMID: 25071959      PMCID: PMC4102359          DOI: 10.1364/BOE.5.002196

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  50 in total

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7.  Aligning scan locations from consecutive spectral-domain optical coherence tomography examinations: a comparison among different strategies.

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8.  A generative model for OCT retinal layer segmentation by integrating graph-based multi-surface searching and image registration.

Authors:  Yuanjie Zheng; Rui Xiao; Yan Wang; James C Gee
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9.  Microcystic macular oedema, thickness of the inner nuclear layer of the retina, and disease characteristics in multiple sclerosis: a retrospective study.

Authors:  Shiv Saidha; Elias S Sotirchos; Mohamed A Ibrahim; Ciprian M Crainiceanu; Jeffrey M Gelfand; Yasir J Sepah; John N Ratchford; Jiwon Oh; Michaela A Seigo; Scott D Newsome; Laura J Balcer; Elliot M Frohman; Ari J Green; Quan D Nguyen; Peter A Calabresi
Journal:  Lancet Neurol       Date:  2012-10-04       Impact factor: 44.182

10.  Retinal pathologic changes in multiple sclerosis.

Authors:  J B Kerrison; T Flynn; W R Green
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  7 in total

1.  Effects of Spatial Resolution on Image Registration.

Authors:  Can Zhao; Aaron Carass; Amod Jog; Jerry L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-21

2.  Automated Deformation-Based Analysis of 3D Optical Coherence Tomography in Diabetic Retinopathy.

Authors:  Maziyar M Khansari; Jiong Zhang; Yuchuan Qiao; Jin Kyu Gahm; Mona Sharifi Sarabi; Amir H Kashani; Yonggang Shi
Journal:  IEEE Trans Med Imaging       Date:  2019-06-24       Impact factor: 10.048

3.  Voxel Based Morphometry in Optical Coherence Tomography: Validation & Core Findings.

Authors:  Bhavna J Antony; Min Chen; Aaron Carass; Bruno M Jedynak; Omar Al-Louzi; Sharon D Solomon; Shiv Saidha; Peter A Calabresi; Jerry L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-29

4.  Inter-scanner Variation Independent Descriptors for Constrained Diffeomorphic Demons Registration of Retina OCT.

Authors:  S Reaungamornrat; A Carass; Y He; S Saidha; P A Calabresi; J L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03-02

Review 5.  Past, present and future role of retinal imaging in neurodegenerative disease.

Authors:  Amir H Kashani; Samuel Asanad; Jane W Chan; Maxwell B Singer; Jiong Zhang; Mona Sharifi; Maziyar M Khansari; Farzan Abdolahi; Yonggang Shi; Alessandro Biffi; Helena Chui; John M Ringman
Journal:  Prog Retin Eye Res       Date:  2021-01-15       Impact factor: 19.704

6.  Age and Glaucoma-Related Characteristics in Retinal Nerve Fiber Layer and Choroid: Localized Morphometrics and Visualization Using Functional Shapes Registration.

Authors:  Sieun Lee; Morgan L Heisler; Karteek Popuri; Nicolas Charon; Benjamin Charlier; Alain Trouvé; Paul J Mackenzie; Marinko V Sarunic; Mirza Faisal Beg
Journal:  Front Neurosci       Date:  2017-07-12       Impact factor: 4.677

7.  Quantifying Variability in Longitudinal Peripapillary RNFL and Choroidal Layer Thickness Using Surface Based Registration of OCT Images.

Authors:  Sieun Lee; Morgan Heisler; Paul J Mackenzie; Marinko V Sarunic; Mirza Faisal Beg
Journal:  Transl Vis Sci Technol       Date:  2017-02-28       Impact factor: 3.283

  7 in total

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