Literature DB >> 25070688

Genetic mapping and QTL analysis of growth traits in the large yellow croaker Larimichthys crocea.

Hua Ye1, Yang Liu, Xiande Liu, Xiaoqing Wang, Zhiyong Wang.   

Abstract

Large yellow croaker (Larimichthys crocea) is an important maricultured species in China. A genetic linkage map of the large yellow croaker was constructed using type II microsatellites and expressed sequence tag (EST)-derived microsatellites in two half-sib families (two females and one male). A total of 289 microsatellite markers (contained 93 EST-SSRs) were integrated into 24 linkage groups, which agreed with the haploid chromosome number. The map spanned a length of 1,430.8 cm with an average interval of 5.4 cm, covering 83.9 % of the estimated genome size (1,704.8 cm). A total of seven quantitative trait locis (QTLs) were detected for growth traits on five linkage groups, including two 1 % and five 5 % chromosome-wide significant QTLs, and explained from 2.33 to 5.31 % of the trait variation. The identified QTLs can be applied in marker-assisted selection programs to improve the growth traits.

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Year:  2014        PMID： 25070688     DOI： 10.1007/s10126-014-9590-z

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN： 1436-2228            Impact factor:   3.619


  49 in total

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6.  A genetic linkage map for zebrafish: comparative analysis and localization of genes and expressed sequences.

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10.  A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers.

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Journal:  BMC Genomics       Date:  2008-05-15       Impact factor: 3.969
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  13 in total

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3.  Genomic Selection Using Extreme Phenotypes and Pre-Selection of SNPs in Large Yellow Croaker (Larimichthys crocea).

Authors:  Linsong Dong; Shijun Xiao; Junwei Chen; Liang Wan; Zhiyong Wang
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4.  Identification of novel genes significantly affecting growth in catfish through GWAS analysis.

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Journal:  Mol Genet Genomics       Date:  2017-12-12       Impact factor: 3.291

5.  Genome-Wide Association Study of Growth and Body-Shape-Related Traits in Large Yellow Croaker (Larimichthys crocea) Using ddRAD Sequencing.

Authors:  Zhixiong Zhou; Kunhuang Han; Yidi Wu; Huaqiang Bai; Qiaozhen Ke; Fei Pu; Yilei Wang; Peng Xu
Journal:  Mar Biotechnol (NY)       Date:  2019-07-22       Impact factor: 3.619

6.  A Genome-Wide Association Study Reveals That Genes with Functions for Bone Development Are Associated with Body Conformation in Catfish.

Authors:  Xin Geng; Shikai Liu; Zihao Yuan; Yanliang Jiang; Degui Zhi; Zhanjiang Liu
Journal:  Mar Biotechnol (NY)       Date:  2017-10-02       Impact factor: 3.619

7.  Genome sequencing of the perciform fish Larimichthys crocea provides insights into molecular and genetic mechanisms of stress adaptation.

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8.  Gene map of large yellow croaker (Larimichthys crocea) provides insights into teleost genome evolution and conserved regions associated with growth.

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9.  Rapid construction of genome map for large yellow croaker (Larimichthys crocea) by the whole-genome mapping in BioNano Genomics Irys system.

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Journal:  BMC Genomics       Date:  2015-09-03       Impact factor: 3.969

10.  Construction of the High-Density Genetic Linkage Map and Chromosome Map of Large Yellow Croaker (Larimichthys crocea).

Authors:  Jingqun Ao; Jia Li; Xinxin You; Yinnan Mu; Yang Ding; Kaiqiong Mao; Chao Bian; Pengfei Mu; Qiong Shi; Xinhua Chen
Journal:  Int J Mol Sci       Date:  2015-11-03       Impact factor: 5.923
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