Literature DB >> 25069280

[Taxonomy of previously unclassified Tamdy virus (TAMV) (Bunyaviridae, Nairovirus) isolated from the Hyalomma asiaticum asiaticum Schülce et Schlottke, 1929 (Ixodidae, Hyalomminae) in the Middle East and transcaucasia].

D K L'vov, S V Al'khovskiĭ, M Iu Shchelkanov, A M Shchetinin, V A Aristova, A K Gitel'man, P G Deriabin, A G Botikov.   

Abstract

Complete genome sequencing of three Tamdy (TAMV) virus strains was carried out. The prototype strain TAMV/LEIV-1308Uz was isolated for the very first time from the Hyalomma asiaticum asiaticum Schülce et Schlottke, 1929 (Ixodidae, Hyalomminae) collected in the August 1971 from sheep in the arid area near Namdybulak town (41 degrees 36' N, 64 degrees 39' E) in the Tamdinsky district of the Bukhara region (Uzbekistan). TAMV was revealed to be a prototype member of the new phylogenetic group within the limits of the Nairovirus. The TAMV homology for RdRp (L-segment) amino acid sequence is not less than 40% with Crimea-Congo hemorrhagic fever virus (CCHFV), Hazara virus (HAZV), and Dugbe virus (DUGV), which are also linked with Ixodidae ticks. The TAMV homologies with the Issyk-Kul virus (ISKV) and Caspiy virus (CASV) for RdRp are 37.6% and 37.7%, respectively. These data conformed to the low values of GnGc (M-segment) and nucleocapsid protein N (S-segment) homology. The TAMV homologies with the nairoviruses for GnGc is in average 25%; with the nairoviruses linked with Ixodidae ticks (CCHFV, DUGV, HAZV) - 33%; with Argasidae ticks (ISKV, CASV) - 28%. The TAMV/LEIV-1308Uz, LEIV-6158Ar, and LEIV-10226Az have high level of identity. The TAMV/LEIV-10226Az from Azerbaijan has 99% homology for both nucleotide and amino acid sequences of the prototype TAMV/LEIV-1308Uz RdRp. The TAMV/LEIV-6158Ar from Armenia is more divergent and has 94.2% and 96.3% homologies with the TAMV/LEIV-1308Uz, respectively. The homology between the TAMV/LEIV-1308Uz and TAMV/LEIV-10226Az for GnGc is 93%. The TAMV/LEIV-6158Ar has 90% homology for this protein with the TAMV/LEIV-1308Uz and 93% with the TAMV/LEIV-10226Az, respectively. Differences in nucleocapsid protein between three TAMV strains are 5-7%.

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Year:  2014        PMID: 25069280

Source DB:  PubMed          Journal:  Vopr Virusol        ISSN: 0507-4088


  4 in total

1.  A Global Genomic Characterization of Nairoviruses Identifies Nine Discrete Genogroups with Distinctive Structural Characteristics and Host-Vector Associations.

Authors:  Peter J Walker; Steven G Widen; Thomas G Wood; Hilda Guzman; Robert B Tesh; Nikolaos Vasilakis
Journal:  Am J Trop Med Hyg       Date:  2016-02-22       Impact factor: 2.345

2.  Genomic Characterization of the Genus Nairovirus (Family Bunyaviridae).

Authors:  Jens H Kuhn; Michael R Wiley; Sergio E Rodriguez; Yīmíng Bào; Karla Prieto; Amelia P A Travassos da Rosa; Hilda Guzman; Nazir Savji; Jason T Ladner; Robert B Tesh; Jiro Wada; Peter B Jahrling; Dennis A Bente; Gustavo Palacios
Journal:  Viruses       Date:  2016-06-10       Impact factor: 5.048

3.  Complete Genome Coding Sequences of Artashat, Burana, Caspiy, Chim, Geran, Tamdy, and Uzun-Agach Viruses (Bunyavirales: Nairoviridae: Orthonairovirus).

Authors:  Sergey V Alkhovsky; Dmitry K Lvov; Alexey M Shchetinin; Petr G Deriabin; Mikhail Y Shchelkanov; Valeriya A Aristova; Tatyana N Morozova; Asya K Gitelman; Gustavo F Palacios; Jens H Kuhn
Journal:  Genome Announc       Date:  2017-10-05

4.  Tamdy Virus in Ixodid Ticks Infesting Bactrian Camels, Xinjiang, China, 2018.

Authors:  Hong Zhou; Zhenghai Ma; Tao Hu; Yuhai Bi; Amutikari Mamuti; Runyuan Yu; Michael J Carr; Mang Shi; Juan Li; Kirill Sharshov; George F Gao; Weifeng Shi
Journal:  Emerg Infect Dis       Date:  2019-11       Impact factor: 6.883

  4 in total

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