Literature DB >> 25058574

Coordination, microprotonation equilibria and conformational changes of myo-inositol hexakisphosphate with pertinence to its biological function.

Nicolás Veiga1, Julia Torres, Israel Macho, Kerman Gómez, Gabriel González, Carlos Kremer.   

Abstract

Within all the eukaryotic cells there is an important group of biomolecules that has been potentially related to signalling functions: the myo-inositol phosphates (InsPs). In nature, the most abundant member of this family is the so called InsP6 (phytate, L(12-)), for which our group has strived in the past to elucidate its intricate chemical behaviour. In this work we expand on our earlier findings, shedding light on the inframolecular details of its protonation and complexation processes. We evaluate systematically the chemical performance of InsP6 in the presence and absence of alkali and alkaline earth metal ions, through (31)P NMR measurements, in a non-interacting medium and over a wide pH range. The analysis of the titration curves by means of a model based on the cluster expansion method allows us to describe in detail the distribution of the different protonated microspecies of the ligand. With the aid of molecular modelling tools, we assess the energetic and geometrical characteristics of the protonation sequence and the conformational transition suffered by InsP6 as the pH changes. By completely characterizing the protonation pattern, conformation and geometry of the metal complexes, we unveil the chemical and structural basis behind the influence that the physiologically relevant cations, Na(+), K(+), Mg(2+) and Ca(2+) have over the phytate chemical reactivity. This information is essential in the process of gaining reliable structural knowledge about the most important InsP6 species in the in vitro and in vivo experiments, and how these features modulate their probable biological functions.

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Year:  2014        PMID: 25058574     DOI: 10.1039/c4dt01350f

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  6 in total

1.  Inositol polyphosphates intersect with signaling and metabolic networks via two distinct mechanisms.

Authors:  Mingxuan Wu; Lucy S Chong; David H Perlman; Adam C Resnick; Dorothea Fiedler
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-19       Impact factor: 11.205

2.  5-IP7 is a GPCR messenger mediating neural control of synaptotagmin-dependent insulin exocytosis and glucose homeostasis.

Authors:  Xiaozhe Zhang; Na Li; Jun Zhang; Yanshen Zhang; Xiaoli Yang; Yifan Luo; Bobo Zhang; Zhixue Xu; Zhenhua Zhu; Xiuyan Yang; Yuan Yan; Biao Lin; Shen Wang; Da Chen; Caichao Ye; Yan Ding; Mingliang Lou; Qingcui Wu; Zhanfeng Hou; Keren Zhang; Ziming Liang; Anqi Wei; Bianbian Wang; Changhe Wang; Nan Jiang; Wenqing Zhang; Guozhi Xiao; Cong Ma; Yan Ren; Xiangbing Qi; Weiping Han; Chao Wang; Feng Rao
Journal:  Nat Metab       Date:  2021-10-18

3.  Cellular Cations Control Conformational Switching of Inositol Pyrophosphate Analogues.

Authors:  Anastasia Hager; Mingxuan Wu; Huanchen Wang; Nathaniel W Brown; Stephen B Shears; Nicolás Veiga; Dorothea Fiedler
Journal:  Chemistry       Date:  2016-07-27       Impact factor: 5.236

Review 4.  Analytical Methods for Determination of Phytic Acid and Other Inositol Phosphates: A Review.

Authors:  Gregor Marolt; Mitja Kolar
Journal:  Molecules       Date:  2020-12-31       Impact factor: 4.411

5.  Structure of a cereal purple acid phytase provides new insights to phytate degradation in plants.

Authors:  Raquel Faba-Rodriguez; Yinghong Gu; Melissa Salmon; Giuseppe Dionisio; Henrik Brinch-Pedersen; Charles A Brearley; Andrew M Hemmings
Journal:  Plant Commun       Date:  2022-02-19

6.  Complex Formation of Phytic Acid With Selected Monovalent and Divalent Metals.

Authors:  Gregor Marolt; Ema Gričar; Boris Pihlar; Mitja Kolar
Journal:  Front Chem       Date:  2020-09-23       Impact factor: 5.221

  6 in total

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