Literature DB >> 2505841

A kinetic study of wild-type and mutant dihydrofolate reductases from Lactobacillus casei.

J Andrews1, C A Fierke, B Birdsall, G Ostler, J Feeney, G C Roberts, S J Benkovic.   

Abstract

A kinetic scheme is presented for Lactobacillus casei dihydrofolate reductase that predicts steady-state kinetic parameters. This scheme was derived from measuring association and dissociation rate constants and pre-steady-state transients by using stopped-flow fluorescence and absorbance spectroscopy. Two major features of this kinetic scheme are the following: (i) product dissociation is the rate-limiting step for steady-state turnover at low pH and follows a specific, preferred pathway in which tetrahydrofolate (H4F) dissociation occurs after NADPH replaces NADP+ in the ternary complex; (ii) the rate constant for hydride transfer from NADPH to dihydrofolate (H2F) is rapid (khyd = 430 s-1), favorable (Keq = 290), and pH dependent (pKa = 6.0), reflecting ionization of a single group. Not only is this scheme identical in form with the Escherichia coli kinetic scheme [Fierke et al. (1987) Biochemistry 26, 4085] but moreover none of the rate constants vary by more than 40-fold despite there being less than 30% amino acid homology between the two enzymes. This similarity is consistent with their overall structural congruence. The role of Trp-21 of L. casei dihydrofolate reductase in binding and catalysis was probed by amino acid substitution. Trp-21, a strictly conserved residue near both the folate and coenzyme binding sites, was replaced by leucine. Two major effects of this substitution are on (i) the rate constant for hydride transfer which decreases 100-fold, becoming the rate-limiting step in steady-state turnover, and (ii) the affinities for NADPH and NADP+ which decrease by approximately 3.5 and approximately 0.5 kcal mol-1, respectively.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1989        PMID: 2505841     DOI: 10.1021/bi00440a007

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Inactivation kinetics of dihydrofolate reductase from Chinese hamster during urea denaturation.

Authors:  J W Wu; Z X Wang; J M Zhou
Journal:  Biochem J       Date:  1997-06-01       Impact factor: 3.857

2.  Two parallel pathways in the kinetic sequence of the dihydrofolate reductase from Mycobacterium tuberculosis.

Authors:  Clarissa M Czekster; An Vandemeulebroucke; John S Blanchard
Journal:  Biochemistry       Date:  2011-07-22       Impact factor: 3.162

3.  Kinetic and chemical mechanism of the dihydrofolate reductase from Mycobacterium tuberculosis.

Authors:  Clarissa M Czekster; An Vandemeulebroucke; John S Blanchard
Journal:  Biochemistry       Date:  2010-12-29       Impact factor: 3.162

4.  Effects of the donor-acceptor distance and dynamics on hydride tunneling in the dihydrofolate reductase catalyzed reaction.

Authors:  Vanja Stojković; Laura L Perissinotti; Daniel Willmer; Stephen J Benkovic; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2012-01-17       Impact factor: 15.419

5.  Kinetic and structural characterization of dihydrofolate reductase from Streptococcus pneumoniae.

Authors:  Jeeyeon Lee; Neela H Yennawar; Jongsik Gam; Stephen J Benkovic
Journal:  Biochemistry       Date:  2010-01-12       Impact factor: 3.162

6.  Activation of dihydrofolate reductase following thiol modification involves a conformational change at the active site.

Authors:  Y X Fan; Z Y Li; L Zhu; J M Zhou
Journal:  Biochem J       Date:  1998-11-01       Impact factor: 3.857

7.  Correlated motion and the effect of distal mutations in dihydrofolate reductase.

Authors:  Thomas H Rod; Jennifer L Radkiewicz; Charles L Brooks
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-19       Impact factor: 11.205

8.  NMR structures of apo L. casei dihydrofolate reductase and its complexes with trimethoprim and NADPH: contributions to positive cooperative binding from ligand-induced refolding, conformational changes, and interligand hydrophobic interactions.

Authors:  James Feeney; Berry Birdsall; Nadezhda V Kovalevskaya; Yegor D Smurnyy; Emna M Navarro Peran; Vladimir I Polshakov
Journal:  Biochemistry       Date:  2011-04-14       Impact factor: 3.162

9.  A kinetic alignment of orthologous inosine-5'-monophosphate dehydrogenases.

Authors:  Thomas V Riera; Wen Wang; Helen R Josephine; Lizbeth Hedstrom
Journal:  Biochemistry       Date:  2008-07-22       Impact factor: 3.162

  9 in total

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