Literature DB >> 25056884

Stability determinants of murine cytomegalovirus long noncoding RNA7.2.

Toni M Schwarz1, Caroline A Kulesza2.   

Abstract

Cytomegalovirus is a ubiquitous herpesvirus that persistently replicates in glandular epithelial tissue. Murine cytomegalovirus expresses a 7.2-kb-long noncoding RNA (RNA7.2) that is a determinant of viral persistence in the salivary gland. RNA7.2 is an extremely long-lived intron, yet the basis of its stability is unknown. We present data that localize key sequence determinants of RNA stability to the 3' end of RNA7.2 and suggest that stability is a result of sustained lariat conformation.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID： 25056884      PMCID： PMC4178805          DOI： 10.1128/JVI.01695-14

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  12 in total

1.  Herpes simplex virus latency-associated transcript is a stable intron.

Authors:  M J Farrell; A T Dobson; L T Feldman
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-01       Impact factor: 11.205

2.  A quantitative assay for measuring mRNA decapping by splinted ligation reverse transcription polymerase chain reaction: qSL-RT-PCR.

Authors:  Nathan Blewett; Jeff Coller; Aaron Goldstrohm
Journal:  RNA       Date:  2011-01-10       Impact factor: 4.942

3.  Selection of a nonconsensus branch point is influenced by an RNA stem-loop structure and is important to confer stability to the herpes simplex virus 2-kilobase latency-associated transcript.

Authors:  C Krummenacher; J M Zabolotny; N W Fraser
Journal:  J Virol       Date:  1997-08       Impact factor: 5.103

4.  Analysis of the 2-kilobase latency-associated transcript expressed in PC12 cells productively infected with herpes simplex virus type 1: evidence for a stable, nonlinear structure.

Authors:  E Rødahl; L Haarr
Journal:  J Virol       Date:  1997-02       Impact factor: 5.103

5.  Removing rRNA from deproteinized, phenol-extracted total RNA by enzymatic digestion.

Authors:  Timothy W Nilsen
Journal:  Cold Spring Harb Protoc       Date:  2012-11-01

6.  The herpes simplex virus type 1 2.0-kilobase latency-associated transcript is a stable intron which branches at a guanosine.

Authors:  J M Zabolotny; C Krummenacher; N W Fraser
Journal:  J Virol       Date:  1997-06       Impact factor: 5.103

7.  Murine cytomegalovirus encodes a stable intron that facilitates persistent replication in the mouse.

Authors:  Caroline A Kulesza; Thomas Shenk
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-14       Impact factor: 11.205

8.  A spliced intron accumulates as a lariat in the nucleus of T cells.

Authors:  L Qian; M N Vu; M Carter; M F Wilkinson
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

9.  Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.

Authors:  Hitoshi Suzuki; Yuhong Zuo; Jinhua Wang; Michael Q Zhang; Arun Malhotra; Akila Mayeda
Journal:  Nucleic Acids Res       Date:  2006-05-08       Impact factor: 16.971

10.  Molecular investigation of the 7.2 kb RNA of murine cytomegalovirus.

Authors:  Toni M Schwarz; Lysa-Anne M Volpe; Christopher G Abraham; Caroline A Kulesza
Journal:  Virol J       Date:  2013-12-02       Impact factor: 4.099
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  8 in total

1.  ShapeShifter: a novel approach for identifying and quantifying stable lariat intronic species in RNAseq data.

Authors:  Allison J Taggart; William G Fairbrother
Journal:  Quant Biol       Date:  2018-07-25

Review 2.  Viral noncoding RNAs: more surprises.

Authors:  Kazimierz T Tycowski; Yang Eric Guo; Nara Lee; Walter N Moss; Tenaya K Vallery; Mingyi Xie; Joan A Steitz
Journal:  Genes Dev       Date:  2015-03-15       Impact factor: 11.361

Review 3.  Long noncoding RNAs in innate immunity.

Authors:  Yuan Zhang; Xuetao Cao
Journal:  Cell Mol Immunol       Date:  2015-08-17       Impact factor: 11.530

Review 4.  Roles of LncRNAs in Viral Infections.

Authors:  Weiwei Liu; Chan Ding
Journal:  Front Cell Infect Microbiol       Date:  2017-05-26       Impact factor: 5.293

Review 5.  Long Non-Coding RNAs: Novel Players in Regulation of Immune Response Upon Herpesvirus Infection.

Authors:  Waqas Ahmed; Zheng-Fei Liu
Journal:  Front Immunol       Date:  2018-04-12       Impact factor: 7.561

6.  Inhibition of Murine Cytomegalovirus Infection in Animals by RNase P-Associated External Guide Sequences.

Authors:  Wei Li; Jingxue Sheng; Mengqiong Xu; Gia-Phong Vu; Zhu Yang; Yujun Liu; Xu Sun; Phong Trang; Sangwei Lu; Fenyong Liu
Journal:  Mol Ther Nucleic Acids       Date:  2017-10-16

Review 7.  Non-Coding RNAs: Strategy for Viruses' Offensive.

Authors:  Alessia Gallo; Matteo Bulati; Vitale Miceli; Nicola Amodio; Pier Giulio Conaldi
Journal:  Noncoding RNA       Date:  2020-09-10

8.  Human Cytomegalovirus Long Non-coding RNA1.2 Suppresses Extracellular Release of the Pro-inflammatory Cytokine IL-6 by Blocking NF-κB Activation.

Authors:  Betty Lau; Karen Kerr; Quan Gu; Katie Nightingale; Robin Antrobus; Nicolás M Suárez; Richard J Stanton; Eddie C Y Wang; Michael P Weekes; Andrew J Davison
Journal:  Front Cell Infect Microbiol       Date:  2020-07-22       Impact factor: 6.073
  8 in total

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