Literature DB >> 25050793

Structural correlation method for model reduction and practical estimation of patient specific parameters illustrated on heart rate regulation.

Johnny T Ottesen1, Jesper Mehlsen2, Mette S Olufsen3.   

Abstract

We consider the inverse and patient specific problem of short term (seconds to minutes) heart rate regulation specified by a system of nonlinear ODEs and corresponding data. We show how a recent method termed the structural correlation method (SCM) can be used for model reduction and for obtaining a set of practically identifiable parameters. The structural correlation method includes two steps: sensitivity and correlation analysis. When combined with an optimization step, it is possible to estimate model parameters, enabling the model to fit dynamics observed in data. This method is illustrated in detail on a model predicting baroreflex regulation of heart rate and applied to analysis of data from a rat and healthy humans. Numerous mathematical models have been proposed for prediction of baroreflex regulation of heart rate, yet most of these have been designed to provide qualitative predictions of the phenomena though some recent models have been developed to fit observed data. In this study we show that the model put forward by Bugenhagen et al. can be simplified without loss of its ability to predict measured data and to be interpreted physiologically. Moreover, we show that with minimal changes in nominal parameter values the simplified model can be adapted to predict observations from both rats and humans. The use of these methods make the model suitable for estimation of parameters from individuals, allowing it to be adopted for diagnostic procedures.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Inverse problems; Model reduction; Nonlinear heart rate model; Parameter estimation; Patient specific modeling; Structural correlation method

Mesh:

Year:  2014        PMID: 25050793      PMCID: PMC4252605          DOI: 10.1016/j.mbs.2014.07.003

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  20 in total

1.  Functionality of the baroreceptor nerves in heart rate regulation.

Authors:  J T Ottesen; M S Olufsen
Journal:  Comput Methods Programs Biomed       Date:  2010-12-16       Impact factor: 5.428

2.  Modeling baroreflex regulation of heart rate during orthostatic stress.

Authors:  Mette S Olufsen; Hien T Tran; Johnny T Ottesen; Lewis A Lipsitz; Vera Novak
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3.  Linear and nonlinear viscoelastic modeling of aorta and carotid pressure-area dynamics under in vivo and ex vivo conditions.

Authors:  Daniela Valdez-Jasso; Daniel Bia; Yanina Zócalo; Ricardo L Armentano; Mansoor A Haider; Mette S Olufsen
Journal:  Ann Biomed Eng       Date:  2011-01-04       Impact factor: 3.934

4.  Identifying physiological origins of baroreflex dysfunction in salt-sensitive hypertension in the Dahl SS rat.

Authors:  Scott M Bugenhagen; Allen W Cowley; Daniel A Beard
Journal:  Physiol Genomics       Date:  2010-03-30       Impact factor: 3.107

Review 5.  Regulation of basal and reserve cardiac pacemaker function by interactions of cAMP-mediated PKA-dependent Ca2+ cycling with surface membrane channels.

Authors:  Tatiana M Vinogradova; Edward G Lakatta
Journal:  J Mol Cell Cardiol       Date:  2009-06-30       Impact factor: 5.000

6.  Cholinergic receptor signaling modulates spontaneous firing of sinoatrial nodal cells via integrated effects on PKA-dependent Ca(2+) cycling and I(KACh).

Authors:  Alexey E Lyashkov; Tatiana M Vinogradova; Ihor Zahanich; Yue Li; Antoine Younes; H Bradley Nuss; Harold A Spurgeon; Victor A Maltsev; Edward G Lakatta
Journal:  Am J Physiol Heart Circ Physiol       Date:  2009-06-19       Impact factor: 4.733

7.  A practical approach to parameter estimation applied to model predicting heart rate regulation.

Authors:  Mette S Olufsen; Johnny T Ottesen
Journal:  J Math Biol       Date:  2012-05-16       Impact factor: 2.259

8.  Insights into the behaviour of systems biology models from dynamic sensitivity and identifiability analysis: a case study of an NF-kappaB signalling pathway.

Authors:  Hong Yue; Martin Brown; Joshua Knowles; Hong Wang; David S Broomhead; Douglas B Kell
Journal:  Mol Biosyst       Date:  2006-10-23

9.  Structural identifiability of viscoelastic mechanical systems.

Authors:  Adam Mahdi; Nicolette Meshkat; Seth Sullivant
Journal:  PLoS One       Date:  2014-02-11       Impact factor: 3.240

10.  Modeling the afferent dynamics of the baroreflex control system.

Authors:  Adam Mahdi; Jacob Sturdy; Johnny T Ottesen; Mette S Olufsen
Journal:  PLoS Comput Biol       Date:  2013-12-12       Impact factor: 4.475

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  3 in total

1.  A model-based analysis of autonomic nervous function in response to the Valsalva maneuver.

Authors:  E Benjamin Randall; Anna Billeschou; Louise S Brinth; Jesper Mehlsen; Mette S Olufsen
Journal:  J Appl Physiol (1985)       Date:  2019-08-01

2.  Modeling the differentiation of A- and C-type baroreceptor firing patterns.

Authors:  Jacob Sturdy; Johnny T Ottesen; Mette S Olufsen
Journal:  J Comput Neurosci       Date:  2016-10-05       Impact factor: 1.621

3.  Cardiovascular regulation in response to multiple hemorrhages: analysis and parameter estimation.

Authors:  Maria-Veronica Ciocanel; Steffen S Docken; Rebecca E Gasper; Caron Dean; Brian E Carlson; Mette S Olufsen
Journal:  Biol Cybern       Date:  2018-09-12       Impact factor: 2.086

  3 in total

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